Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g2307 ATGCCTTTGCCTGCCAAGTTGCCTCTTCACCAACACCACCACCGAAAATATATGTCACCGCAGAGTGCGCCAGCAGCTGGACTAGCACCGGCATCTCCTCCTTATTATGGGCCTCTTATCACTTCTGGTCACCCACCCACAAGTTCAAGTTTTTCAAAACCATCGATGAAGAGTGGGTCAGCTCCTCCTGATGGTAGGCTTGAAAACATTGCTCCCATACAGTCCAGTGCTGGTGCTATTCCCTCTGGATTACCTCAGCCACCACTTTCTCCTAATGCAGCAGACTGTTGCAAACCTGACATGGTGCTGAAACGAGGAGGTGGCAATGACTGCCACTGTGTCTATCCCATAAAAATTGATCTCCTCCTCTTGAATGTATCACAGAATCCTAATTGGAAACATTTTCTTGAAGAGTTAGCTTCCGAACTTGGTTTACGAGTCTCTCAGATTGAGCTGATAAACTTTTATGTACTTAGTTTATCAAGATTAAATATCTCAATGGACATTACTCCGCACGCTGGGATCAGCTTCTCTGCAGTTGATGCATCTGCAATAAACTCTTCACTTACAATGCATAAGGTTCATTTAGACCCTACACTGGTTGGTGATTACAATCTTCTTAATATCACCTGGTTTAAGCCTCCGCCTCCTTCTCAAGCTCCTACTGCTTCTGCATCACCTGTAGCCGCTCCAGCATATCATTTTCCAGCCTCAACATCACTGAGTCCTCCTAGTAAAGGACACCATTCCAATCTGACACTTCTTCTTGGTATCGGTGCTGGTTTTCTTTTCGTTGCCATTCTATTTGTGTTGATAATTTGTCTATGCACATCTCATCGTGGGAAGCGGAAGACTGAAGCACCTCCATTAGTAGCTGAAAAACCAAGGGTTGAGGACAAGGTCCTTGGGGTAGGATCTTTCCCTCATCCATCGAGTATGAGATTTCTAACTTATGAGGAGCTTAAAGAAGCAACTAATAACTTTGAAGCTGCAAGCATACTGGGGGAGGGTGGTTTTGGCAGGGTTTTTAAGGGTGTCTTAAGTGATGGCACAGCTGTTGCAATCAAGAGGCTTACAAGTGGAGGGCAACAAGGCGACAAGGAGTTTTTGGTTGAGGTCGAGATGCTTAGCCGGTTGCATCACCGAAATCTCGTTAAACTTGTTGGCTACTACAGTAATCGCGACTCTTCACAAAACCTGCTATGCTATGAACTTGTTCCAAATGGAAGCTTGGAGGCCTGGCTCCATGGTCCTCTAGGTGTTAATTGTCCTTTGGATTGGGACACCAGAATGAAGATTGCACTGGATGCCGCTCGAGGACTTGCTTACCTTCATGAAGACTCACAGCCATGTGTTATCCACAGAGACTTTAAGGCGTCAAATATATTGCTTGAGAACAACTTCCATGCCAAAGTTGCTGACTTTGGTCTTGCTAAACAAGCTCCGGAAGGCAGAGCTAATTACCTTTCTACTCGGGTGATGGGCACATTTGGGTATGTCGCTCCCGAGTATGCAATGACTGGTCATTTACTCGTTAAAAGTGATGTTTATAGCTATGGAGTTGTTCTTCTCGAGTTGCTCACTGGAAGGAAACCTGTAGATATGTCACAACCATCAGGACAGGAAAACCTGGTCACATGGGCTAGGCCGATTTTGAGAGATAAGGATCGGTTGGAAGAACTTGCTGATCCACGACTTGGAGGAAAGTATCCGAACGAAGATTTCGTGCGGGTGTGTACCATTGCTGCAGCCTGCGTTGCTCCTGAGGCTGGCCAACGTCCAACTATGGGCGAAGTTGTACAGTCTCTTAAAATGGTGCAACGCGTTACAGAGTACCAAGACTCCATGGTACCATCCACCAACAATCGAACCAATCTTAGACAGTCCTCCACGACATTCGAGTCCGATGGATCCTCTTCAATGTTCTCTTCTGGTCCTTATTCGGGTTTAAGCGCTTTTGACAATGACAATGTATCTCGGACAGCAATTTTCTCCGAAGATCTTCACGAGGGACGATGA 2019 45.96 MPLPAKLPLHQHHHRKYMSPQSAPAAGLAPASPPYYGPLITSGHPPTSSSFSKPSMKSGSAPPDGRLENIAPIQSSAGAIPSGLPQPPLSPNAADCCKPDMVLKRGGGNDCHCVYPIKIDLLLLNVSQNPNWKHFLEELASELGLRVSQIELINFYVLSLSRLNISMDITPHAGISFSAVDASAINSSLTMHKVHLDPTLVGDYNLLNITWFKPPPPSQAPTASASPVAAPAYHFPASTSLSPPSKGHHSNLTLLLGIGAGFLFVAILFVLIICLCTSHRGKRKTEAPPLVAEKPRVEDKVLGVGSFPHPSSMRFLTYEELKEATNNFEAASILGEGGFGRVFKGVLSDGTAVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGVNCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKYPNEDFVRVCTIAAACVAPEAGQRPTMGEVVQSLKMVQRVTEYQDSMVPSTNNRTNLRQSSTTFESDGSSSMFSSGPYSGLSAFDNDNVSRTAIFSEDLHEGR 672
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 81224418 81230139 - Tan0002023.2 Tan04g2307 750711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g2307 672 ProSiteProfiles Protein kinase domain profile. 328 606 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g2307 672 MobiDBLite consensus disorder prediction 1 69 - -
Tan04g2307 672 FunFam Receptor-like serine/threonine-protein kinase ALE2 406 623 - -
Tan04g2307 672 Pfam Protein tyrosine and serine/threonine kinase 331 603 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan04g2307 672 Gene3D Transferase(Phosphotransferase) domain 1 406 628 - -
Tan04g2307 672 MobiDBLite consensus disorder prediction 42 57 - -
Tan04g2307 672 SUPERFAMILY Protein kinase-like (PK-like) 307 605 IPR011009 -
Tan04g2307 672 PANTHER OS01G0750732 PROTEIN 95 645 IPR050885 -
Tan04g2307 672 Gene3D Phosphorylase Kinase; domain 1 309 405 - -
Tan04g2307 672 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524(InterPro)
Tan04g2307 672 MobiDBLite consensus disorder prediction 617 654 - -
Tan04g2307 672 FunFam Receptor-like serine/threonine-protein kinase ALE2 308 405 - -
Tan04g2307 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2307 Tan-Chr4:81224418 Tan04g2309 Tan-Chr4:81224418 0.00E+00 dispersed
Tan04g2306 Tan-Chr4:81224418 Tan04g2307 Tan-Chr4:81224418 0.00E+00 tandem
Tan04g2307 Tan-Chr4:81224418 Tan04g2308 Tan-Chr4:81224418 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67485 PF00069 Pkinase 4.90E-44 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g2307 - - - 0.0