Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g2308 ATGCCTTTGCCTGCCAAGTTGCCTCTTCACCAACACCACCACCGAAAATATATGTCACCGCAGAGTGCGCCAGCAGCTGGACTAGCACCGGCATCTCCTCCTTATTATGGGCCTCTTATCACTTCTGGTCACCCACCCACAAGTTCAAGTTTTTCAAAACCATCGATGAAGAGTGGGTCAGCTCCTCCTGATGGTAGGCTTGAAAACATTGCTCCCATACAGTCCAGTGCTGGTGCTATTCCCTCTGGATTACCTCAGCCACCACTTTCTCCTAATGCAGCAGACTGTTGCAAACCTGACATGGTGCTGAAACGAGGAGGTGGCAATGACTGCCACTGTGTCTATCCCATAAAAATTGATCTCCTCCTCTTGAATGTATCACAGAATCCTAATTGGAAACATTTTCTTGAAGAGTTAGCTTCCGAACTTGGTTTACGAGTCTCTCAGATTGAGCTGATAAACTTTTATGTACTTAGTTTATCAAGATTAAATATCTCAATGGACATTACTCCGCACGCTGGGATCAGCTTCTCTGCAGTTGATGCATCTGCAATAAACTCTTCACTTACAATGCATAAGGTTCATTTAGACCCTACACTGGTTGGTGATTACAATCTTCTTAATATCACCTGGTTTAAGCCTCCGCCTCCTTCTCAAGCTCCTACTGCTTCTGCATCACCTGTAGCCGCTCCAGCATATCATTTTCCAGCCTCAACATCACTGAGTCCTCCTAGTAAAGGACACCATTCCAATCTGACACTTCTTCTTGGTATCGGTGCTGGTTTTCTTTTCGTTGCCATTCTATTTGTGTTGATAATTTGTCTATGCACATCTCATCGTGGGAAGCGGAAGACTGAAGCACCTCCATTAGTAGCTGAAAAACCAAGGGTTGAGGACAAGGTCCTTGGGGTAGGATCTTTCCCTCATCCATCGAGTATGAGATTTCTAACTTATGAGGAGCTTAAAGAAGCAACTAATAACTTTGAAGCTGCAAGCATACTGGGGGAGGGTGGTTTTGGCAGGGTTTTTAAGGGTGTCTTAAGTGATGGCACAGCTGTTGCAATCAAGAGGCTTACAAGTGGAGGGCAACAAGGCGACAAGGAGTTTTTGGTTGAGGTCGAGATGCTTAGCCGGTTGCATCACCGAAATCTCGTTAAACTTGTTGGCTACTACAGTAATCGCGACTCTTCACAAAACCTGCTATGCTATGAACTTGTTCCAAATGGAAGCTTGGAGGCCTGGCTCCATGGTCCTCTAGGTGTTAATTGTCCTTTGGATTGGGACACCAGAATGAAGATTGCACTGGATGCCGCTCGAGGACTTGCTTACCTTCATGAAGACTCACAGCCATGTGTTATCCACAGAGACTTTAAGGCGTCAAATATATTGCTTGAGAACAACTTCCATGCCAAAGTTGCTGACTTTGGTCTTGCTAAACAAGCTCCGGAAGGCAGAGCTAATTACCTTTCTACTCGGGTGATGGGCACATTTGGGTTTGTGTCGTTCCCTTATCTCAAAGTAGTTAGTTCTTGCACATTGGATCTTGATGGAATAGAGTTCCGTTGCAGGTATGTCGCTCCCGAGTATGCAATGACTGGTCATTTACTCGTTAAAAGTGATGTTTATAGCTATGGAGTTGTTCTTCTCGAGTTGCTCACTGGAAGGAAACCTGTAGATATGTCACAACCATCAGGACAGGAAAACCTGGTCACATGGGCTAGGCCGATTTTGAGAGATAAGGATCGGTTGGAAGAACTTGCTGATCCACGACTTGGAGGAAAGTATCCGAACGAAGATTTCGTGCGGGTGTGTACCATTGCTGCAGCCTGCGTTGCTCCTGAGGCTGGCCAACGTCCAACTATGGGCGAAGTTGTACAGTCTCTTAAAATGGTGCAACGCGTTACAGAGTACCAAGACTCCATGGTACCATCCACCAACAATCGAACCAATCTTAGACAGTCCTCCACGACATTCGAGTCCGATGGATCCTCTTCAATGTTCTCTTCTGGTCCTTATTCGGGTTTAAGCGCTTTTGACAATGACAATGTATCTCGGACAGCAATTTTCTCCGAAGATCTTCACGAGGGACGATGA 2094 45.8 MPLPAKLPLHQHHHRKYMSPQSAPAAGLAPASPPYYGPLITSGHPPTSSSFSKPSMKSGSAPPDGRLENIAPIQSSAGAIPSGLPQPPLSPNAADCCKPDMVLKRGGGNDCHCVYPIKIDLLLLNVSQNPNWKHFLEELASELGLRVSQIELINFYVLSLSRLNISMDITPHAGISFSAVDASAINSSLTMHKVHLDPTLVGDYNLLNITWFKPPPPSQAPTASASPVAAPAYHFPASTSLSPPSKGHHSNLTLLLGIGAGFLFVAILFVLIICLCTSHRGKRKTEAPPLVAEKPRVEDKVLGVGSFPHPSSMRFLTYEELKEATNNFEAASILGEGGFGRVFKGVLSDGTAVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGVNCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGFVSFPYLKVVSSCTLDLDGIEFRCRYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKYPNEDFVRVCTIAAACVAPEAGQRPTMGEVVQSLKMVQRVTEYQDSMVPSTNNRTNLRQSSTTFESDGSSSMFSSGPYSGLSAFDNDNVSRTAIFSEDLHEGR 697
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 81224418 81230139 - Tan0002023.3 Tan04g2308 750712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g2308 697 Gene3D Transferase(Phosphotransferase) domain 1 406 653 - -
Tan04g2308 697 MobiDBLite consensus disorder prediction 1 69 - -
Tan04g2308 697 Pfam Protein kinase domain 329 626 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g2308 697 ProSiteProfiles Protein kinase domain profile. 328 631 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g2308 697 MobiDBLite consensus disorder prediction 42 57 - -
Tan04g2308 697 FunFam Receptor-like serine/threonine-protein kinase ALE2 308 405 - -
Tan04g2308 697 Gene3D Phosphorylase Kinase; domain 1 309 405 - -
Tan04g2308 697 PANTHER OS01G0750732 PROTEIN 95 670 IPR050885 -
Tan04g2308 697 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524(InterPro)
Tan04g2308 697 SUPERFAMILY Protein kinase-like (PK-like) 307 630 IPR011009 -
Tan04g2308 697 MobiDBLite consensus disorder prediction 642 679 - -
Tan04g2308 697 FunFam Protein kinase superfamily protein 406 480 - -
Tan04g2308 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2308 Tan-Chr4:81224418 Tan06g0168 Tan-Chr6:1536338 1.20E-102 dispersed
Tan04g2307 Tan-Chr4:81224418 Tan04g2308 Tan-Chr4:81224418 0.00E+00 tandem
Tan04g2308 Tan-Chr4:81224418 Tan04g2309 Tan-Chr4:81224418 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67486 PF00069 Pkinase 7.80E-39 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g2308 - - - 0.0