Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g2309 ATGTCGGTGCCTGCGGCTTTCGTCGCTGCAGGTATATTGAAACAGGTCTCTTGTCGGTTTCCAAAGCAGTTCATTTTGTTGTGGTTTGTGATTTCCATCACCAATGCTTACGTTCCCGATATACCAGCAGCACCTTTGGTTGCACCTGCTATCCACGATATGCCTTTGCCTGCCAAGTTGCCTCTTCACCAACACCACCACCGAAAATATATGTCACCGCAGAGTGCGCCAGCAGCTGGACTAGCACCGGCATCTCCTCCTTATTATGGGCCTCTTATCACTTCTGGTCACCCACCCACAAGTTCAAGTTTTTCAAAACCATCGATGAAGAGTGGGTCAGCTCCTCCTGATGGTAGGCTTGAAAACATTGCTCCCATACAGTCCAGTGCTGGTGCTATTCCCTCTGGATTACCTCAGCCACCACTTTCTCCTAATGCAGCAGACTGTTGCAAACCTGACATGGTGCTGAAACGAGGAGGTGGCAATGACTGCCACTGTGTCTATCCCATAAAAATTGATCTCCTCCTCTTGAATGTATCACAGAATCCTAATTGGAAACATTTTCTTGAAGAGTTAGCTTCCGAACTTGGTTTACGAGTCTCTCAGATTGAGCTGATAAACTTTTATGTACTTAGTTTATCAAGATTAAATATCTCAATGGACATTACTCCGCACGCTGGGATCAGCTTCTCTGCAGTTGATGCATCTGCAATAAACTCTTCACTTACAATGCATAAGGTTCATTTAGACCCTACACTGGTTGGTGATTACAATCTTCTTAATATCACCTGGTTTAAGCCTCCGCCTCCTTCTCAAGCTCCTACTGCTTCTGCATCACCTGTAGCCGCTCCAGCATATCATTTTCCAGCCTCAACATCACTGAGTCCTCCTAGTAAAGGACACCATTCCAATCTGACACTTCTTCTTGGTATCGGTGCTGGTTTTCTTTTCGTTGCCATTCTATTTGTGTTGATAATTTGTCTATGCACATCTCATCGTGGGAAGCGGAAGACTGAAGCACCTCCATTAGTAGCTGAAAAACCAAGGGTTGAGGACAAGGTCCTTGGGGTAGGATCTTTCCCTCATCCATCGAGTATGAGATTTCTAACTTATGAGGAGCTTAAAGAAGCAACTAATAACTTTGAAGCTGCAAGCATACTGGGGGAGGGTGGTTTTGGCAGGGTTTTTAAGGGTGTCTTAAGTGATGGCACAGCTGTTGCAATCAAGAGGCTTACAAGTGGAGGGCAACAAGGCGACAAGGAGTTTTTGGTTGAGGTCGAGATGCTTAGCCGGTTGCATCACCGAAATCTCGTTAAACTTGTTGGCTACTACAGTAATCGCGACTCTTCACAAAACCTGCTATGCTATGAACTTGTTCCAAATGGAAGCTTGGAGGCCTGGCTCCATGGTCCTCTAGGTGTTAATTGTCCTTTGGATTGGGACACCAGAATGAAGATTGCACTGGATGCCGCTCGAGGACTTGCTTACCTTCATGAAGACTCACAGCCATGTGTTATCCACAGAGACTTTAAGGCGTCAAATATATTGCTTGAGAACAACTTCCATGCCAAAGTTGCTGACTTTGGTCTTGCTAAACAAGCTCCGGAAGGCAGAGCTAATTACCTTTCTACTCGGGTGATGGGCACATTTGGGTTTGTGTCGTTCCCTTATCTCAAAGTAGTTAGTTCTTGCACATTGGATCTTGATGGAATAGAGTTCCGTTGCAGGTATGTCGCTCCCGAGTATGCAATGACTGGTCATTTACTCGTTAAAAGTGATGTTTATAGCTATGGAGTTGTTCTTCTCGAGTTGCTCACTGGAAGGAAACCTGTAGATATGTCACAACCATCAGGACAGGAAAACCTGGTCACATGGGCTAGGCCGATTTTGAGAGATAAGGATCGGTTGGAAGAACTTGCTGATCCACGACTTGGAGGAAAGTATCCGAACGAAGATTTCGTGCGGGTGTGTACCATTGCTGCAGCCTGCGTTGCTCCTGAGGCTGGCCAACGTCCAACTATGGGCGAAGTTGTACAGTCTCTTAAAATGGTGCAACGCGTTACAGAGTACCAAGACTCCATGGTACCATCCACCAACAATCGAACCAATCTTAGACAGTCCTCCACGACATTCGAGTCCGATGGATCCTCTTCAATGTTCTCTTCTGGTCCTTATTCGGGTTTAAGCGCTTTTGACAATGACAATGTATCTCGGACAGCAATTTTCTCCGAAGATCTTCACGAGGGACGATGA 2253 45.94 MSVPAAFVAAGILKQVSCRFPKQFILLWFVISITNAYVPDIPAAPLVAPAIHDMPLPAKLPLHQHHHRKYMSPQSAPAAGLAPASPPYYGPLITSGHPPTSSSFSKPSMKSGSAPPDGRLENIAPIQSSAGAIPSGLPQPPLSPNAADCCKPDMVLKRGGGNDCHCVYPIKIDLLLLNVSQNPNWKHFLEELASELGLRVSQIELINFYVLSLSRLNISMDITPHAGISFSAVDASAINSSLTMHKVHLDPTLVGDYNLLNITWFKPPPPSQAPTASASPVAAPAYHFPASTSLSPPSKGHHSNLTLLLGIGAGFLFVAILFVLIICLCTSHRGKRKTEAPPLVAEKPRVEDKVLGVGSFPHPSSMRFLTYEELKEATNNFEAASILGEGGFGRVFKGVLSDGTAVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGVNCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGFVSFPYLKVVSSCTLDLDGIEFRCRYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKYPNEDFVRVCTIAAACVAPEAGQRPTMGEVVQSLKMVQRVTEYQDSMVPSTNNRTNLRQSSTTFESDGSSSMFSSGPYSGLSAFDNDNVSRTAIFSEDLHEGR 750
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 81224418 81230139 - Tan0002023.4 Tan04g2309 750713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g2309 750 ProSiteProfiles Protein kinase domain profile. 381 684 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g2309 750 MobiDBLite consensus disorder prediction 97 120 - -
Tan04g2309 750 Pfam Protein kinase domain 382 679 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g2309 750 PANTHER OS01G0750732 PROTEIN 148 723 IPR050885 -
Tan04g2309 750 FunFam Protein kinase superfamily protein 459 533 - -
Tan04g2309 750 ProSitePatterns Serine/Threonine protein kinases active-site signature. 505 517 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan04g2309 750 Gene3D Phosphorylase Kinase; domain 1 362 458 - -
Tan04g2309 750 MobiDBLite consensus disorder prediction 695 732 - -
Tan04g2309 750 ProSitePatterns Protein kinases ATP-binding region signature. 387 409 IPR017441 GO:0005524(InterPro)
Tan04g2309 750 FunFam Receptor-like serine/threonine-protein kinase ALE2 361 458 - -
Tan04g2309 750 SUPERFAMILY Protein kinase-like (PK-like) 360 683 IPR011009 -
Tan04g2309 750 Gene3D Transferase(Phosphotransferase) domain 1 459 706 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2306 Tan-Chr4:81224418 Tan04g2309 Tan-Chr4:81224418 0.00E+00 dispersed
Tan04g2307 Tan-Chr4:81224418 Tan04g2309 Tan-Chr4:81224418 0.00E+00 dispersed
Tan04g2309 Tan-Chr4:81224418 Tan09g1144 Tan-Chr9:63759171 5.90E-103 dispersed
Tan04g2308 Tan-Chr4:81224418 Tan04g2309 Tan-Chr4:81224418 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67487 PF00069 Pkinase 9.40E-39 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g2309 - - - 0.0