Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g2311 ATGGAACATTCCAAAGACATAATTTTGTTAATAACAACGTTGTTGTTTCTTTGTGTCAATGTTTCAAAGGCATTGAATTGTGAGTTGAATTATAATGATCCTCACAAAGTTGCATATACTATTGTTGTTGACAAATTAGGAAGAGGAAATTTCAGAACAGTTCAAAGTGCCATTGATTCAATCCCTTTTCAAAATACTCGATGGATTAGAATTCAAATTTCTCGTGGCATATATTGGGAAAAGGTGGTAATTCCCAGAGGAAAATCATGCATTTTTCTAGATGGGGCTGGCAGAAGTTTCACTGAAATTCAATGGAATGACAATATAACCACAATTGCTAGTGCCACTTTCACTTCTTTTGCACAAAACCTTGTAGTAAAAGGCATCACTTTTAAGAATACTTATAATGCGGCAGGAAGTGTGAGGAGACGTGAAGATATAAGACCAGCACTTGCAGCTTACATAGATGGAGATAAAGGAATTTTTCATAAGTGTGGTTTTATTGGACTACAAGATACATTATGGGATGGACCTGGTCGTCATCACTACACCAAATGCTACATTGAAGGTGTAATCGACGTCATATCTGGCTCGGGCCAATCTATCTTCGAGAAGTGTGTAATAAATATACCAATCCATGAATATGGTCCAATATTAGATCATGGTTACATAACAGCTCAAGGAAAGGATAATTCAACTCAAACCAATGGGTTTGTTTTCATAGCATGCTCAGTTGGTGGAAGTGGGAGAGTTTATCTTGGAAGGGCTTATAGATCTTTCTCCACAGTTATTTTTTATCTATCTTTTTTACCATCTTGCATTGACCCTGCTGGTTGGGATTCTTGGGAACAAGTTGGTCATGAGAAGAGTTTGACATATGCAGAAACACGTTGTTTTGGACCAGGAGCAGACACTTCAAAGCGTGTGCCTTGGATTAAGAGACTCATTGGAGTTCAGATAAGACATTTCATAAATATTTCTTTTATCGATCAAGAAGGTTGGACTTCAAAGCTTCCTCAATTTTCATATTAA 1032 36.82 MEHSKDIILLITTLLFLCVNVSKALNCELNYNDPHKVAYTIVVDKLGRGNFRTVQSAIDSIPFQNTRWIRIQISRGIYWEKVVIPRGKSCIFLDGAGRSFTEIQWNDNITTIASATFTSFAQNLVVKGITFKNTYNAAGSVRRREDIRPALAAYIDGDKGIFHKCGFIGLQDTLWDGPGRHHYTKCYIEGVIDVISGSGQSIFEKCVINIPIHEYGPILDHGYITAQGKDNSTQTNGFVFIACSVGGSGRVYLGRAYRSFSTVIFYLSFLPSCIDPAGWDSWEQVGHEKSLTYAETRCFGPGADTSKRVPWIKRLIGVQIRHFINISFIDQEGWTSKLPQFSY 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 81280719 81285405 - Tan0017675.1 Tan04g2311 750715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g2311 343 Pfam Pectinesterase 41 329 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Tan04g2311 343 SUPERFAMILY Pectin lyase-like 37 336 IPR011050 -
Tan04g2311 343 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 12 336 - GO:0030599(PANTHER)|GO:0045490(PANTHER)|GO:0052689(PANTHER)
Tan04g2311 343 FunFam Pectinesterase 35 339 - -
Tan04g2311 343 Gene3D - 34 340 IPR012334 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2311 Tan-Chr4:81280719 Tan06g2308 Tan-Chr6:74239335 5.80E-82 dispersed
Tan04g2311 Tan-Chr4:81280719 Tan04g2312 Tan-Chr4:81335063 1.40E-155 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g2311 - - - 0.0