Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g2314 ATGGAGAAGAAGAAGGACGAGATTGTAAAGATGGAGGACACCAGTACAAGCGGCGACGGCGGCGGCGGCGGCGGTGGTGGGTATTTGCCATTTTCCGATAATATGATAGCAAACAGTTTCTTTGATTTTTCTGATGGTGAAAAATGCTCTGTTGGGTTCATGGACCTGCTTGCTCTTAATAATCATGAATTTAAAGATTACTGTTCGGAGTTTTTTAATCCTCCGGCCACCCCTAATTCCTCCTCCATCTCCTCCGCCTCTAGCGACGCCGTCAACGACGACTCCGCCGCCGCCGCCGATAACAAGGCTGATGATGATGACCCTCAACATCAACAACAACAACACAAGCCCTCTAAACATTTGAAGGTGAAGAAGAAGAGGAAGGAGAAGAAAGAGAAAGAGAGAAGATTTGCATTCATGACGAAAAGTGAGGTAGATCATCTAGAAGATGGATATCGATGGAGAAAGTACGGCCAAAAAGCTGTCAAAAACAGCCCTTTTCCTAGGAGCTATTATCGTTGCACTAGTGTAGCTTGTAACGTAAAGAAGAGAGTTGAACGATCTTTTGTTGATCCAACCGTTGTGGTGACCACCTACGAAGGCCAACACACTCACCCAAGCCCGATCCTCACTCGGTCTGCCCTCATCGCTCCGCCTCCTCCCTCCACCACTGTGTCGGGAGGAGGATGCGTCGGCTTTGCAACCATGCCATGGCTCAAAGCTAGCAACAACACTCATGATGGCAATATTCCAGCAATATCGCATCAGTACTTTCAAAACTCGACCTACTTCACCGCCCAACATTCAAACGTCGATTGCAACCGCAACCTGATCGGAGCAGCGAGCGTGGCCGGATTCCTTCAGGAGAAACGATTCTGCAACTTAAATCCTGTTTTTCTTGCAGACCATGGGCTGCTTCAAGATGTTGTTCCTCCCCACATGCTGAAACAGGAGTAA 957 48.28 MEKKKDEIVKMEDTSTSGDGGGGGGGGYLPFSDNMIANSFFDFSDGEKCSVGFMDLLALNNHEFKDYCSEFFNPPATPNSSSISSASSDAVNDDSAAAADNKADDDDPQHQQQQHKPSKHLKVKKKRKEKKEKERRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSVACNVKKRVERSFVDPTVVVTTYEGQHTHPSPILTRSALIAPPPPSTTVSGGGCVGFATMPWLKASNNTHDGNIPAISHQYFQNSTYFTAQHSNVDCNRNLIGAASVAGFLQEKRFCNLNPVFLADHGLLQDVVPPHMLKQE 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 81400396 81404200 + Tan0001367.1 Tan04g2314 750718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g2314 318 Pfam WRKY DNA -binding domain 149 206 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan04g2314 318 MobiDBLite consensus disorder prediction 115 132 - -
Tan04g2314 318 MobiDBLite consensus disorder prediction 78 138 - -
Tan04g2314 318 FunFam WRKY transcription factor 57 134 208 - -
Tan04g2314 318 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 90 224 IPR044810 GO:0003700(InterPro)
Tan04g2314 318 SUPERFAMILY WRKY DNA-binding domain 140 208 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan04g2314 318 MobiDBLite consensus disorder prediction 98 114 - -
Tan04g2314 318 SMART WRKY_cls 148 207 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan04g2314 318 MobiDBLite consensus disorder prediction 78 94 - -
Tan04g2314 318 MobiDBLite consensus disorder prediction 1 25 - -
Tan04g2314 318 ProSiteProfiles WRKY domain profile. 143 208 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan04g2314 318 Gene3D WRKY domain 132 209 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2314 Tan-Chr4:81400396 Tan06g2778 Tan-Chr6:79967303 2.60E-36 dispersed
Tan04g2314 Tan-Chr4:81400396 Tan04g2315 Tan-Chr4:81400396 3.60E-134 tandem
Tan04g2314 Tan-Chr4:81400396 Tan06g0714 Tan-Chr6:5453674 2.30E-40 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27312 PF03106 WRKY 1.50E-25 CL0274 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g2314 - - - 0.0