Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan04g2336 | ATGGAGGAAACTTTTGTTCCTTTTCGTGGGATCAAGAATGACCTGAAAGGGAGGTTAGTGTGTTACAAACAAGACTGGACTGGTGGGTTGAAAGCTGGATATAGGATTTTGGCTCCCACCACTTACATATTCTTTGCCTCTGCAATTCCTGTCATTTCATTTGGTGAACAGTTGGAGAGAAATACTGATGGGGTGCTGACTGCAGTTCAAACATTGGCCTCCACAGCTCTTTGTGGGATCATTCACTCCATTGTTGGAGGTCAACCTTTGCTAATCTTGGGAGTTGCTGAGCCTACTGTTATTATGTACACCTTCATGTTTAATTTTGCAAAGGAACGACCCGAGTTGGGCCGGAATCTGTTTCTAGCATGGAGTGGATGGGTGTGTGTTTGGACTGCAGCCTTGCTGTTCTTAATGGCTATATTAGGAGCTTGCTCCATCATCAATAGGTTCACTCGTCTGGCCGGTGAACTGTTTGGTTTGCTTATTGCAATGCTTTTCATGCAGCAAGCAGTCAAAGGACTTGTGGATGAGTTTCGCATCCCAGAACGGGAAAATTCGAAATTGATCGAGTTTATACCTTCTTGGAGGTTTGCTAATGGGATGTTTGCTTTGGTACTGTCGTTTGGCCTTCTACTCACTGCTTTAAGGAGTCGAAAAGCACGGTCGTGGCGGTATGGATCTGGTTGGCTAAGAAGCTTGATAGCAGACTATGGAGTGCCACTCATGGTTCTTGTTTGGACAGGTATATCATATATACCTTCAAAAAGTGTCCCACAAGGTATCCCGAGGCGACTCTTCAGCCCGAATCCATGGTCTCCCGGTGCGTATGACAATTGGACTGTTATTAAGGATATGCTTGACGTTCCAGTTTTTTATATCTGTGGAGCTTTCATCCCGGCAACGATGATTGCGGTGCTTTACTATTTCGATCATAGTGTTGCATCTCAACTTGCTCAGCAGAAAGAGTTCAATTTGAGGAAACCATCTTCTTACCATTATGATTTACTTCTATTGGGATTCTTGACCTTACTATGTGGTCTTCTTGGAATTCCTCCATCTAATGGCGTCATCCCACAATCTCCAATGCATACAAAGAGCCTGGCTACCCTCAAACACCAGTTGCTGAGGAATAAACTTGTAGAAACGGCGCGGAGTAGTATGAGAAAGAATGCTAGCTTGGGACAGTTGTATGGAAGTATGCAAGAAGCATATAATCAAATGCAGACCCCCCTGATCTACCAACAGCCTGCAGCTCGTGGACTGAATGAGCTAAAAGAAACAACCATTCAGGCAGCTTCTAGTATGGGAAGTTTTGATGCGCCGGTTGATGAGACAGTATTCGACATCGAAAAGGAAATTGATGATCTATTGCCTGTTGAGGTGAAAGAACAGCGCGTCAGTAATTTGCTTCAAGCTGCAATGGTGGGAGGATGTGTTGCAGCCATGCCGGTCCTGAAAAAGATCCCGACCTCGGTTCTATGGGGTTACTTCGCCTTTATGGCCATCGAAAGCTTGCCTGGTAACCAGTTTTGGGAGAGAATCTTGTTGCTCTTCACTGCACCCAGCAGAAGATACAAAGTTCTTGAGGATTACCACGCGACTTTCGTCGAAACCGTGCCATTCAAATCCATTGCACTTTTTACCATTTTCCAAACTGTATATTTGTTCATATGTTTTGGACTAACATGGGTTCCGATCGCTGGGGTCATGTTTCCTCTGATGATCATGCTCCTCGTCCCCGTACGACAATACCTTCTTCCCAAGTTCTTCAAAGGTGCACATCTTCAAGACCTTGATGCAGCTGAATATGAAGAAGCACCGGCTTTACCGTTCAATCTTGCGACGGAAGCCGAGCTGGGTGCTGGAGCCTCATTTGGTGGGGATGGAGAGATTTTAGACGAGGTGATCACCAGAAGCCGTGGCGAGTTTAGGCATATTAGTAGTCCTAAGATCACAAGCTCCACGGCAACACCAACTTGTGACCGAAAAAGTTTCGACAGCCCTCGTCGCTCTTTCAGCCCTCGGGTGAGCGAGCTAAGAGGGGAACTCAGCCCTCGAGCAGGGGGCCGAGGGACACCGGGTCAGAGAAGTGCAGAAGCTAAACCATCCAGTCTGGGAAAGAGCCCTCTTAATAACAACACAGCATCAAAGTAG | 2157 | 46.31 | MEETFVPFRGIKNDLKGRLVCYKQDWTGGLKAGYRILAPTTYIFFASAIPVISFGEQLERNTDGVLTAVQTLASTALCGIIHSIVGGQPLLILGVAEPTVIMYTFMFNFAKERPELGRNLFLAWSGWVCVWTAALLFLMAILGACSIINRFTRLAGELFGLLIAMLFMQQAVKGLVDEFRIPERENSKLIEFIPSWRFANGMFALVLSFGLLLTALRSRKARSWRYGSGWLRSLIADYGVPLMVLVWTGISYIPSKSVPQGIPRRLFSPNPWSPGAYDNWTVIKDMLDVPVFYICGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLLCGLLGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVETARSSMRKNASLGQLYGSMQEAYNQMQTPLIYQQPAARGLNELKETTIQAASSMGSFDAPVDETVFDIEKEIDDLLPVEVKEQRVSNLLQAAMVGGCVAAMPVLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKSIALFTIFQTVYLFICFGLTWVPIAGVMFPLMIMLLVPVRQYLLPKFFKGAHLQDLDAAEYEEAPALPFNLATEAELGAGASFGGDGEILDEVITRSRGEFRHISSPKITSSTATPTCDRKSFDSPRRSFSPRVSELRGELSPRAGGRGTPGQRSAEAKPSSLGKSPLNNNTASK | 718 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 81729512 | 81734208 | + | Tan0018009.1 | Tan04g2336 | 750740 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan04g2336 | 718 | FunFam | probable boron transporter 2 | 18 | 60 | - | - | |
Tan04g2336 | 718 | MobiDBLite | consensus disorder prediction | 648 | 663 | - | - | |
Tan04g2336 | 718 | Pfam | HCO3- transporter integral membrane domain | 201 | 373 | IPR011531 | GO:0006820(InterPro)|GO:0016020(InterPro) | |
Tan04g2336 | 718 | Pfam | HCO3- transporter integral membrane domain | 460 | 602 | IPR011531 | GO:0006820(InterPro)|GO:0016020(InterPro) | |
Tan04g2336 | 718 | Pfam | HCO3- transporter integral membrane domain | 7 | 180 | IPR011531 | GO:0006820(InterPro)|GO:0016020(InterPro) | |
Tan04g2336 | 718 | MobiDBLite | consensus disorder prediction | 698 | 718 | - | - | |
Tan04g2336 | 718 | PANTHER | ANION EXCHANGE PROTEIN | 4 | 639 | IPR003020 | GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0046715(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER) | |
Tan04g2336 | 718 | MobiDBLite | consensus disorder prediction | 648 | 718 | - | - | |
Tan04g2336 | 718 | Gene3D | Helical hairpin bin | 18 | 60 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan04g2336 | Tan-Chr4:81729512 | Tan05g2004 | Tan-Chr5:69974347 | 0.00E+00 | dispersed | |
Tan04g2336 | Tan-Chr4:81729512 | Tan04g2613 | Tan-Chr4:85326527 | 4.90E-224 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan04g2336 | K24194 | - | csv:101205388 | 1347.41 |