Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g2336 ATGGAGGAAACTTTTGTTCCTTTTCGTGGGATCAAGAATGACCTGAAAGGGAGGTTAGTGTGTTACAAACAAGACTGGACTGGTGGGTTGAAAGCTGGATATAGGATTTTGGCTCCCACCACTTACATATTCTTTGCCTCTGCAATTCCTGTCATTTCATTTGGTGAACAGTTGGAGAGAAATACTGATGGGGTGCTGACTGCAGTTCAAACATTGGCCTCCACAGCTCTTTGTGGGATCATTCACTCCATTGTTGGAGGTCAACCTTTGCTAATCTTGGGAGTTGCTGAGCCTACTGTTATTATGTACACCTTCATGTTTAATTTTGCAAAGGAACGACCCGAGTTGGGCCGGAATCTGTTTCTAGCATGGAGTGGATGGGTGTGTGTTTGGACTGCAGCCTTGCTGTTCTTAATGGCTATATTAGGAGCTTGCTCCATCATCAATAGGTTCACTCGTCTGGCCGGTGAACTGTTTGGTTTGCTTATTGCAATGCTTTTCATGCAGCAAGCAGTCAAAGGACTTGTGGATGAGTTTCGCATCCCAGAACGGGAAAATTCGAAATTGATCGAGTTTATACCTTCTTGGAGGTTTGCTAATGGGATGTTTGCTTTGGTACTGTCGTTTGGCCTTCTACTCACTGCTTTAAGGAGTCGAAAAGCACGGTCGTGGCGGTATGGATCTGGTTGGCTAAGAAGCTTGATAGCAGACTATGGAGTGCCACTCATGGTTCTTGTTTGGACAGGTATATCATATATACCTTCAAAAAGTGTCCCACAAGGTATCCCGAGGCGACTCTTCAGCCCGAATCCATGGTCTCCCGGTGCGTATGACAATTGGACTGTTATTAAGGATATGCTTGACGTTCCAGTTTTTTATATCTGTGGAGCTTTCATCCCGGCAACGATGATTGCGGTGCTTTACTATTTCGATCATAGTGTTGCATCTCAACTTGCTCAGCAGAAAGAGTTCAATTTGAGGAAACCATCTTCTTACCATTATGATTTACTTCTATTGGGATTCTTGACCTTACTATGTGGTCTTCTTGGAATTCCTCCATCTAATGGCGTCATCCCACAATCTCCAATGCATACAAAGAGCCTGGCTACCCTCAAACACCAGTTGCTGAGGAATAAACTTGTAGAAACGGCGCGGAGTAGTATGAGAAAGAATGCTAGCTTGGGACAGTTGTATGGAAGTATGCAAGAAGCATATAATCAAATGCAGACCCCCCTGATCTACCAACAGCCTGCAGCTCGTGGACTGAATGAGCTAAAAGAAACAACCATTCAGGCAGCTTCTAGTATGGGAAGTTTTGATGCGCCGGTTGATGAGACAGTATTCGACATCGAAAAGGAAATTGATGATCTATTGCCTGTTGAGGTGAAAGAACAGCGCGTCAGTAATTTGCTTCAAGCTGCAATGGTGGGAGGATGTGTTGCAGCCATGCCGGTCCTGAAAAAGATCCCGACCTCGGTTCTATGGGGTTACTTCGCCTTTATGGCCATCGAAAGCTTGCCTGGTAACCAGTTTTGGGAGAGAATCTTGTTGCTCTTCACTGCACCCAGCAGAAGATACAAAGTTCTTGAGGATTACCACGCGACTTTCGTCGAAACCGTGCCATTCAAATCCATTGCACTTTTTACCATTTTCCAAACTGTATATTTGTTCATATGTTTTGGACTAACATGGGTTCCGATCGCTGGGGTCATGTTTCCTCTGATGATCATGCTCCTCGTCCCCGTACGACAATACCTTCTTCCCAAGTTCTTCAAAGGTGCACATCTTCAAGACCTTGATGCAGCTGAATATGAAGAAGCACCGGCTTTACCGTTCAATCTTGCGACGGAAGCCGAGCTGGGTGCTGGAGCCTCATTTGGTGGGGATGGAGAGATTTTAGACGAGGTGATCACCAGAAGCCGTGGCGAGTTTAGGCATATTAGTAGTCCTAAGATCACAAGCTCCACGGCAACACCAACTTGTGACCGAAAAAGTTTCGACAGCCCTCGTCGCTCTTTCAGCCCTCGGGTGAGCGAGCTAAGAGGGGAACTCAGCCCTCGAGCAGGGGGCCGAGGGACACCGGGTCAGAGAAGTGCAGAAGCTAAACCATCCAGTCTGGGAAAGAGCCCTCTTAATAACAACACAGCATCAAAGTAG 2157 46.31 MEETFVPFRGIKNDLKGRLVCYKQDWTGGLKAGYRILAPTTYIFFASAIPVISFGEQLERNTDGVLTAVQTLASTALCGIIHSIVGGQPLLILGVAEPTVIMYTFMFNFAKERPELGRNLFLAWSGWVCVWTAALLFLMAILGACSIINRFTRLAGELFGLLIAMLFMQQAVKGLVDEFRIPERENSKLIEFIPSWRFANGMFALVLSFGLLLTALRSRKARSWRYGSGWLRSLIADYGVPLMVLVWTGISYIPSKSVPQGIPRRLFSPNPWSPGAYDNWTVIKDMLDVPVFYICGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLLCGLLGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVETARSSMRKNASLGQLYGSMQEAYNQMQTPLIYQQPAARGLNELKETTIQAASSMGSFDAPVDETVFDIEKEIDDLLPVEVKEQRVSNLLQAAMVGGCVAAMPVLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKSIALFTIFQTVYLFICFGLTWVPIAGVMFPLMIMLLVPVRQYLLPKFFKGAHLQDLDAAEYEEAPALPFNLATEAELGAGASFGGDGEILDEVITRSRGEFRHISSPKITSSTATPTCDRKSFDSPRRSFSPRVSELRGELSPRAGGRGTPGQRSAEAKPSSLGKSPLNNNTASK 718
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 81729512 81734208 + Tan0018009.1 Tan04g2336 750740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g2336 718 FunFam probable boron transporter 2 18 60 - -
Tan04g2336 718 MobiDBLite consensus disorder prediction 648 663 - -
Tan04g2336 718 Pfam HCO3- transporter integral membrane domain 201 373 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Tan04g2336 718 Pfam HCO3- transporter integral membrane domain 460 602 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Tan04g2336 718 Pfam HCO3- transporter integral membrane domain 7 180 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Tan04g2336 718 MobiDBLite consensus disorder prediction 698 718 - -
Tan04g2336 718 PANTHER ANION EXCHANGE PROTEIN 4 639 IPR003020 GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0046715(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER)
Tan04g2336 718 MobiDBLite consensus disorder prediction 648 718 - -
Tan04g2336 718 Gene3D Helical hairpin bin 18 60 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2336 Tan-Chr4:81729512 Tan05g2004 Tan-Chr5:69974347 0.00E+00 dispersed
Tan04g2336 Tan-Chr4:81729512 Tan04g2613 Tan-Chr4:85326527 4.90E-224 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g2336 K24194 - csv:101205388 1347.41