Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan04g2345 | ATGGAGGCTGGATATGGAGGGGAAGCTTGTCAATTGTACGGTATGGGGTCTATGGACTTGAGGGCTGCTGTTGGAAAGAGGAGTCTTGAATGGGATTTGAATGATTGGAAATGGGATGGAGATCTCTTTATTGCTAGACCTTTAAATACGGTGGAATCTGATCATTTGAGTAGGCAACTTTTTCCAATCGTCTCTGGGATTCCCTTGAACGGAGGAGGTTCGTCGAACAGTTCCTCGTCGTGCTCTGATGAAGCTAATATGGGGATTGAGAAAGGGAAAAGGGAAGTGGAGAAGAGAAGGAGGGTTACTGTTGTTGAAGATGATAATCTTAATGACGAAGCTCGTACTTTGAGTTTGAAGGTTGGTGGAAATGGTTCTCAGATTGTTGAGAGAGAAGCAGGGAATTGGGAAGGAACTAGTGGGAAGAAGACTAAATTGGCTGGGGGAAATTCGAATCGTGCTGTTTGCCAGGTAGAGGACTGTGGAGCAGATCTGAGCAATGCTAAAGATTATCACAGACGGCATAAAGTGTGTGAAACGCATTCTAAGGCGAGTAATGCGCTTGTTGCAAACGTTATGCAGCGATTCTGTCAACAATGTAGCAGGTTCCACGTTCTTCAAGAGTTTGATGAAGGGAAACGGAGTTGTCGTAGGCGATTGGCTGGCCATAATAAGCGCAGAAGAAAAATCAATCCAGATAATGTTGTTAATGGAAATTCTCCACCTGATGAGCAGACTAGCAATTTTTTATCGTTAACTCTGTTGCGAATACTTGCAAGTTTGCACTCCAATGGATCAAATCAGACCACAGATCAGGATCTTCTTTCTCATCTCATACGAACCCTTGCCTGTCAATCTAGTTCGCATGGAGGAAAAAACCTATCTGGGATTCTGCATGAACCTCAGAATTTGCTGAACAATGGGGCATTACTTGGGAAATCAGATCTAGTTTCTACTTTTCTCTCAAATGGTCCTCAGGTACCTTTGAGACCTTCTAAACAACAAGACACGATACCAATATCTGAGACACCCGTGCAAGCAATTGTTAGGGGAGGAGATACACCAGCTATATCTTCTATAAAACCAAGCACGTCGAACAGCCCTCCCGCTTATTCAGAAATCAGGGACAGTACAATTGGGCAATGCAAAATGATGAACTTTGATTTGAACGATGCTTATGTTGACTCAGACGATGAGAGACAAGCACTCCCAGTGCACATGGGAACAAGTTCTCTTGAATGCCCTTCTTGGGTGCAACAAGACTCTCATCAGTCAAGCCCCCCTCAAACTAGTGGAAATTCAGATTCAGCATCTGCCCAGTCACCTTCTAGCTCTACTGGAGAAGCTCAGAGCCGTACAGATCGCATTATTTTGAAATTGTTTGGGAAAGCACCAAATGATTTTCCTCACGTTTTGCGAGCTCAGGTTCTCGATTGGTTATCTCACAGTCCCACAGAGATAGAGAGCTATATCAAGCCTGGTTGTGTTGTTCTAACTATATACCTACGACAGACTGAGGCTGCATGGGACGATCTTTGCCATGACCTCAGTACCAGTTTGAATAGGCTTCTTGATGTTTCGGACGATGCTTTCTGGAGAACTGGATGGGTTTACGTGCGGGTTCAGCATCAAATAGCTTTTGTTTATCATGGTCAGGTTGTAATTGACACATCCTTGCCTCTTAGAAACAAAAATTACTCCCGAATCACAACTGTAAACCCAGTTGCTGTTTCTATATCTAAGAAGGCTATATTTTCGGTTAAAGGAATAAACTTGAGCCGACCTACAACTAGGTTGCTCTGTTCAATTGAAGGGAAATATCTAACTCGGGAACCTTCAGATGAGTCAACAGAAAGTGGTGATAACTTGAAGGCGCAAGATGACAACCAATGTGTTACCTTTTCTTGCTTTATTCCTGTCGTCTATGGAAGAGGATTCATTGAGGTTGAAGATGATGGTTTCAGCAGCAGTTTCTTTCCTTTTATAGTTGCAGAGGAAGATGTTTGTACAGAGATCTGCACACTTCAGAGTGCTTTAGAATTTACTGAAACGTGTTCAAACTCTGGGGAAACTATGGAGCTCGAAGGAAGGAGTAATGCAATGGAGTTTATTCACGAAATTGGTTGGCTATTTCATAGAAATCAGTTGAAGTCTAGATTAGGTCACTTGGATCCTAATGAAAATCTCTTTTCACTGCTACGGTTCAAGTGGCTCATGGAGTTCTCCATGGACCATGATTGGTGTGCTGTGGTTAAAAAGCTGTTAGATGTTCTTCTCGATGGGACCGTGGATGCAGGAGATCACCCGTCCTTGAATTTCGCATTGACGGAAATGAGTCTGCTTCACCGAGCAGTGAGAAAAAACAGTAGGTCTCTGGTGGAGCTCCTTTTGAGATATCCTTCAAAAGTGAAGGATACATCAAGTTCTGAAGACAATGCATCCATTGTTGGAGGAACCAGTAGCTTCCTGTTTAGACCCGATGTCATAGGCCCGGCCGGTTTGACCCCTCTTCACATTGCAGCTGGTAAAGATGATTCCGAGGATGTTCTTGATGCATTAACTAATGACCCGGGAATGGTGGGAGTTGAGGCTTGGAAGAGTGCTCGAGACAGCACGGGCTCGACACCTGAGGATTATGCCCGTTTGCGTGGCCATTACTCGTATATTCGCCTTGTCCAGAGGAAAATCAACAAGAGATCGGCTGGGCATGTCGTGCTGGACATTCCTAGTACTCTCTCAGATGGTAGCTGGAATCAGAAGCAGAACACTGATTTGACCTCCTCCAGGTTTGAGATTGGTAGGACAGAACTAAAATCTACTCAGCAGCACTGCAGGCTTTGTGTCAGGAAACCGCTCGGTTGTGGAACGTCATCTAGCGCATCTCTGGTTTACCGGCCCGCAATGCTTTCAATGGTGGCCATTGCTGCTGTCTGTGTGTGCGTGGCACTCCTATTCAAAAGCTCGCCCGAGGTTCTCTATGTCTTCCGCCCCTTCCGATGGGAACTATTAGATTACGGTACTAGTTAG | 3027 | 44.7 | MEAGYGGEACQLYGMGSMDLRAAVGKRSLEWDLNDWKWDGDLFIARPLNTVESDHLSRQLFPIVSGIPLNGGGSSNSSSSCSDEANMGIEKGKREVEKRRRVTVVEDDNLNDEARTLSLKVGGNGSQIVEREAGNWEGTSGKKTKLAGGNSNRAVCQVEDCGADLSNAKDYHRRHKVCETHSKASNALVANVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKINPDNVVNGNSPPDEQTSNFLSLTLLRILASLHSNGSNQTTDQDLLSHLIRTLACQSSSHGGKNLSGILHEPQNLLNNGALLGKSDLVSTFLSNGPQVPLRPSKQQDTIPISETPVQAIVRGGDTPAISSIKPSTSNSPPAYSEIRDSTIGQCKMMNFDLNDAYVDSDDERQALPVHMGTSSLECPSWVQQDSHQSSPPQTSGNSDSASAQSPSSSTGEAQSRTDRIILKLFGKAPNDFPHVLRAQVLDWLSHSPTEIESYIKPGCVVLTIYLRQTEAAWDDLCHDLSTSLNRLLDVSDDAFWRTGWVYVRVQHQIAFVYHGQVVIDTSLPLRNKNYSRITTVNPVAVSISKKAIFSVKGINLSRPTTRLLCSIEGKYLTREPSDESTESGDNLKAQDDNQCVTFSCFIPVVYGRGFIEVEDDGFSSSFFPFIVAEEDVCTEICTLQSALEFTETCSNSGETMELEGRSNAMEFIHEIGWLFHRNQLKSRLGHLDPNENLFSLLRFKWLMEFSMDHDWCAVVKKLLDVLLDGTVDAGDHPSLNFALTEMSLLHRAVRKNSRSLVELLLRYPSKVKDTSSSEDNASIVGGTSSFLFRPDVIGPAGLTPLHIAAGKDDSEDVLDALTNDPGMVGVEAWKSARDSTGSTPEDYARLRGHYSYIRLVQRKINKRSAGHVVLDIPSTLSDGSWNQKQNTDLTSSRFEIGRTELKSTQQHCRLCVRKPLGCGTSSSASLVYRPAMLSMVAIAAVCVCVALLFKSSPEVLYVFRPFRWELLDYGTS | 1008 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 81953985 | 81962273 | - | Tan0021472.1 | Tan04g2345 | 750749 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan04g2345 | 1008 | MobiDBLite | consensus disorder prediction | 357 | 373 | - | - | |
Tan04g2345 | 1008 | MobiDBLite | consensus disorder prediction | 415 | 450 | - | - | |
Tan04g2345 | 1008 | SUPERFAMILY | Ankyrin repeat | 777 | 891 | IPR036770 | - | |
Tan04g2345 | 1008 | Pfam | SBP domain | 156 | 229 | IPR004333 | GO:0003677(InterPro) | |
Tan04g2345 | 1008 | ProSiteProfiles | Zinc finger SBP-type profile. | 153 | 230 | IPR004333 | GO:0003677(InterPro) | |
Tan04g2345 | 1008 | PANTHER | SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 | 34 | 1006 | IPR044817 | GO:0003677(InterPro) | |
Tan04g2345 | 1008 | MobiDBLite | consensus disorder prediction | 353 | 373 | - | - | |
Tan04g2345 | 1008 | Gene3D | - | 725 | 898 | IPR036770 | - | |
Tan04g2345 | 1008 | Gene3D | - | 147 | 217 | IPR036893 | GO:0003677(InterPro)|GO:0005634(InterPro) | |
Tan04g2345 | 1008 | MobiDBLite | consensus disorder prediction | 224 | 244 | - | - | |
Tan04g2345 | 1008 | FunFam | Squamosa promoter-binding-like protein 14 | 147 | 217 | - | - | |
Tan04g2345 | 1008 | SUPERFAMILY | SBT domain | 154 | 235 | IPR036893 | GO:0003677(InterPro)|GO:0005634(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g5184 | Tan-Chr1:116837938 | Tan04g2345 | Tan-Chr4:81953985 | 1.20E-117 | dispersed | |
Tan01g5185 | Tan-Chr1:116837938 | Tan04g2345 | Tan-Chr4:81953985 | 3.90E-96 | dispersed | |
Tan03g2491 | Tan-Chr3:78340959 | Tan04g2345 | Tan-Chr4:81953985 | 8.80E-29 | dispersed | |
Tan04g2345 | Tan-Chr4:81953985 | Tan10g0936 | Tan-Chr10:8109893 | 1.00E-41 | dispersed | |
Tan04g2345 | Tan-Chr4:81953985 | Tan04g2346 | Tan-Chr4:81953985 | 0.00E+00 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
27315 | PF03110 | SBP | 7.40E-30 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan04g2345 | - | - | - | 0.0 |