Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan04g2362 | ATGTCTCGCCAAGTTCCGACCACTGCGTTCCACAAGTCCAAGACGCTTGATAACAAATATATGCTGGGAGATGAGATCGGGAAAGGAGCATATGGGCGAGTCTACAAAGGTCTGGACTTGGAGAATGGGGACTTTGTTGCTATTAAACAAGTTTCCTTGGAGAATATTGCTCAAGAGGACCTCAACATTATCATGCAAGAGATTGACTTACTGAAGAATTTGAACCACAAAAACATTGTGAAGTATCTTGGATCTCTGAAAACAAAGACTCACCTTCACATAATACTCGAGTATGTGGAGAACGGATCACTTGCCAACATTATCAAGCCAAATAAATTTGGACCTTTTCCAGAATCATTGGTTGCTGTTTATATTTCTCAGGTTTTGGAAGGCTTGGTTTATCTACATGAGCAGGGTGTAATACATCGGGATATAAAGGGTGCGAACATACTGACAACCAAAGAGGGTCTTGTGAAACTTGCTGATTTTGGTGTTGCGACAAAATTAACAGAGGCTGATGTTAATACGCATTCAGTTGTTGGAACACCTTACTGGATGGCTCCTGAGGTAATTGAAATGTCAGGAGTTTGTGCTGCTTCCGACATATGGAGTGTTGGATGTACCGTGATCGAACTACTTACATGCGTACCTCCATATTATGATCTACAACCTATGCCCGCACTTTTTCGCATTGTACAGGACAAGCATCCTCCAATTCCGGATAGCCTATCACCAGACATCACTGATTTCTTACGCCAATGCTTCAAGAAGGATGCTAGGCAAAGGCCTGATGCGAAAACTTTGCTTTCTCATCCTTGGATACAAAACTGTCGACGGGCTTTGCATTCATCTCTTCGTCATAGTGGCACATTGAAAAACACTCAACAAGATGGATCAACAGGAGCAGAAATTTCTAATGGAGACAATCAAAACTCTTGTGAAAGCCCTTCAGCGGAGAAAAATGAAGTTGCTGGTTCTGATTTTAAAGCTGATTCAAGGAAGGAGTTGTCATCAGATGTTGCCACTGATACGAGCAAGTCCCAAAAACATTTTTCTTCAGGCCCTAATTTTGTTGAGGAAGGAGAAAGCCTAGAAGAAGATACTCTATTTGATCAAGTTCCTACCTTATCCATTCATGAAAATTCATCTCTTCTAACTGGTTCTGGCAAACTTGCTACCTCTGAGCCAGCTGAGTTTCCTGAATCTCATGGTAGATCCCATGATGAAGTGGCAATGAATGGTGAAGTGCCATTGGCAGAATTAAGAAAAGATGTTTCTGGGAAACATGGAGAGAAAGAAACTTCTCCAACAGATGGAAATAGATCATTTGGTTTTGGACTTGAAAGTCAAGATAATAGCTTTCAAAAGGTTTCAAAGATGTCAATTGCTTTGGGAGGAAATGAGCTGAGTAAATTTAGCGATACTCCTGGAGATGCATCCTTAGATGATTTATTTCAACCTTTAGATAAGCTCCCCGGGGATCAAGCTGCCGAAGCATCAACATCTCTATCTACCTCACAATCAAACATAGGTAATGTGCCAGTAAATGATGTTGGAAAAAATGACCTGGCCACAAAGTTGAGGGCTACGATTGCTCAGAAACAAATGGAAAATGAGATGGGACAGGCAAATGGTGGTGGTGACCTGCTTCGACTAGTGATGGGTGTTTTAAATGATGATGTTGATATTGATGGTTTGGTTTTTGACGAGAAGTTGCCCGGAGAAAACCTTTATCCCTTGCCGGCTGTTGAATTCGGCAGATTAGTTGGGTCATTGAGACCTGATGAACCCGAAGATGTAATTGTATCTGCCTGTCAAAAACTGATTGCCATCTTCCATCAAAGACCTGAGCAGAAAATTGTTTATGTTACGCAGCATGGTCTACTCCCATTGACAGAGTTGCTTGAAGTTCCTAAAACTCGGATTATATGTTCAGTGCTCCAGCTTATAAATCAGATAGTTAAGGATAACGCTGATTTCCAAGAAAATGCCTGTCTGGTTGGTCTAATTCCTCTGGTAATGGGCTTTGCGGTTCCTGATCGTCCCCGAGAAGTTCGTATGGAAGCAGCTTATTTTTTTCAGCAGCTTTGTCAATCAAGCTCTTTGACATTGCAAATGTTCGTTGCTTGCCGTGGAATACCTGTATTAGTAAGCTTCTTAGAGGCTGATTATGCGAAGTACAGGGAAATGGTTCACCTAGCTATTGATGGAATGTGGCAGATCTTTAAGCTCCAGCGTTCCACTCTTAGAAATGGATTCTGTCGTATAGCAGCAAAAAGTGGAATTCTGCTTAGGCTTATTAACACCCTCTACAGCTTAAACGAGGCAACTCGCTTAGCTTCCATAACAGTTGGGGCTGGAAATCCAGTTGATGGTTTAACTCAGCGGCCACGATCAGGTCAACTAGATCCTAGCCACCCTATATTCAGTCAGTATGAGGCATCATTTCCTGTGCCTGATCAGCCTGATCTTTTGAAGGTCAGGCATGGAATAGTTGATCATCACCTGTCTACTGGAAATGCAGAACCTTCTAGGGCTTCAACTTCACATTCTCAAAGATCAGATGTCAATCAATCTGATCACCGACACTTTTCCACAGATGCTGATAGGTCTCAATCTAGCAATACCACAAATGAAGCGTTGGGACCTTCTAAACCGTCAGAGCTAGCATCTTTAGAAAAAGTTGTAAATTTAGCAACCAAGGAGCCGTCTGGCTCTGCTTCTAAAGAACATGAAAATGTAGATAGATGGAGAACTGAGCGGATGGCCAATTCAAACAGGACTTCCACAGATAGGCCTCCAAAATTGGTGGAACCTGCATCTAATGGGTTTTCTACAGCGTCGGCGGCTACTCAGCAAGAGCAAGTTCGGCCCCTTCTAAGTCTGTTGGACAAAGAACCCCCTTCTCGACATTTTTCCGGTCAGCTTGAGTACATGCGCCACCTTTCTGGATTGGAGAGACATGAAACTATAATGCCTCTATTGCATGCATCAAATGAAAAGAGGATAAATGGGGAGCCTGATTTCTTAATGGCAGAATTTGCTGAGGTTTCTCAACGTGGAAAAGACAATGGAAATCTTGACCCTACTTCCAAGGTTTCCCTTAAAACGGCAGCAAAGAAGGTAGGACCCCTGGTGTCCAATGAAGGAGCTGCTTCCACATCTGGAATTGCCTCACAGACAGCATCTGGGGTACTTTCAGGTTCGGGGGTATTAAATGCTAGACCAGGGAGTGCAACATCCTCTGGACTTCTTTCGCACATGGTTTCGACTATGAACGCTGATGTTGCAAGGGAATATTTGGAGAAGGTGGCTGATCTTCTCCTCGAGTTTGCTCAGGCAGATACAACTGTGAAATCATATATGTGCAGCCAAAGCTTGCTTAATCGCCTTTTCCAGATGTTCAATAGGGTAGAGCCCCCAATTCTTTTGAAGATTTTGAAGTGTGTAAATCATCTATCAACAGATCCAAACTGCTTAGAAAATCTTCAGCGAGCTGATGCAATTAAGTATTTGATTCCGAACCTTGAACTCAAAGAAGGGTCTCTGGTATCGCAAATACACACTGAGGTCCTCAGTGCACTATTCAATTTGTGCAAGATAAATAAGAGGAGGCAAGAATATGCAGCCGAAAATGGAATTATTCCACACTTAATGCATTTTATTATATCAGACTCTCCTCTTAAAAAAGATGCATTGCCTCTACTGTGCGATATGGCCCATGCATCTCGTAATTCTAGGGAGCAGTTAAGAGCCCACGGTGGATTAGATGTGTATTTGAGCCTACTTGAGGATGAGCTTTGGTCTGTCACGGCATTGGATTCTATTGCTGTTTGCTTGGCTCATGACAATGACAACCGAAAAGTTGAACAGGCTTTGCTGAAAAAGGATGCAGTTCAGAAATTGGTGAAGTTTTTCCAGTGCTGTCCAGAACAGCATTTTGTGCATATATTGGAGCCTTTCTTGAAAATCATCACAAAATCTTCCCGAATCAATACGACATTAGCTGTCAATGGATTGACCCCATTGCTTATAGCAAGGCTGGACCATCAGGATGCGATTGCTCGGCTTAATCTACTTAAACTGATAAAGGCTGTGTATGAGCATCATCCACGACCCAAGCAATTGATTGTGGAGAATGATTTACCTCATAAACTTCAGAATTTGATTGAGGAACGCAGAGATGGACAACGGTCTGGTGGCCAAGTGTTGGTGAAACAAATGGCCACATCTCTGCTAAAAGCACTTCATATAAATACCGTTTTGTAA | 4269 | 42.52 | MSRQVPTTAFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKTKTHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYISQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDKHPPIPDSLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALHSSLRHSGTLKNTQQDGSTGAEISNGDNQNSCESPSAEKNEVAGSDFKADSRKELSSDVATDTSKSQKHFSSGPNFVEEGESLEEDTLFDQVPTLSIHENSSLLTGSGKLATSEPAEFPESHGRSHDEVAMNGEVPLAELRKDVSGKHGEKETSPTDGNRSFGFGLESQDNSFQKVSKMSIALGGNELSKFSDTPGDASLDDLFQPLDKLPGDQAAEASTSLSTSQSNIGNVPVNDVGKNDLATKLRATIAQKQMENEMGQANGGGDLLRLVMGVLNDDVDIDGLVFDEKLPGENLYPLPAVEFGRLVGSLRPDEPEDVIVSACQKLIAIFHQRPEQKIVYVTQHGLLPLTELLEVPKTRIICSVLQLINQIVKDNADFQENACLVGLIPLVMGFAVPDRPREVRMEAAYFFQQLCQSSSLTLQMFVACRGIPVLVSFLEADYAKYREMVHLAIDGMWQIFKLQRSTLRNGFCRIAAKSGILLRLINTLYSLNEATRLASITVGAGNPVDGLTQRPRSGQLDPSHPIFSQYEASFPVPDQPDLLKVRHGIVDHHLSTGNAEPSRASTSHSQRSDVNQSDHRHFSTDADRSQSSNTTNEALGPSKPSELASLEKVVNLATKEPSGSASKEHENVDRWRTERMANSNRTSTDRPPKLVEPASNGFSTASAATQQEQVRPLLSLLDKEPPSRHFSGQLEYMRHLSGLERHETIMPLLHASNEKRINGEPDFLMAEFAEVSQRGKDNGNLDPTSKVSLKTAAKKVGPLVSNEGAASTSGIASQTASGVLSGSGVLNARPGSATSSGLLSHMVSTMNADVAREYLEKVADLLLEFAQADTTVKSYMCSQSLLNRLFQMFNRVEPPILLKILKCVNHLSTDPNCLENLQRADAIKYLIPNLELKEGSLVSQIHTEVLSALFNLCKINKRRQEYAAENGIIPHLMHFIISDSPLKKDALPLLCDMAHASRNSREQLRAHGGLDVYLSLLEDELWSVTALDSIAVCLAHDNDNRKVEQALLKKDAVQKLVKFFQCCPEQHFVHILEPFLKIITKSSRINTTLAVNGLTPLLIARLDHQDAIARLNLLKLIKAVYEHHPRPKQLIVENDLPHKLQNLIEERRDGQRSGGQVLVKQMATSLLKALHINTVL | 1422 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 82123935 | 82159206 | + | Tan0015019.1 | Tan04g2362 | 750766 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan04g2362 | 1422 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 140 | 152 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan04g2362 | 1422 | SMART | serkin_6 | 20 | 274 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan04g2362 | 1422 | MobiDBLite | consensus disorder prediction | 285 | 319 | - | - | |
Tan04g2362 | 1422 | SUPERFAMILY | Protein kinase-like (PK-like) | 17 | 275 | IPR011009 | - | |
Tan04g2362 | 1422 | FunFam | MAP3K epsilon protein kinase 1-like | 1071 | 1417 | - | - | |
Tan04g2362 | 1422 | Gene3D | Transferase(Phosphotransferase) domain 1 | 17 | 314 | - | - | |
Tan04g2362 | 1422 | MobiDBLite | consensus disorder prediction | 474 | 517 | - | - | |
Tan04g2362 | 1422 | FunFam | MAP3K epsilon protein kinase 1 | 17 | 306 | - | - | |
Tan04g2362 | 1422 | MobiDBLite | consensus disorder prediction | 836 | 937 | - | - | |
Tan04g2362 | 1422 | CDD | STKc_Cdc7_like | 19 | 274 | - | - | |
Tan04g2362 | 1422 | MobiDBLite | consensus disorder prediction | 869 | 884 | - | - | |
Tan04g2362 | 1422 | MobiDBLite | consensus disorder prediction | 787 | 806 | - | - | |
Tan04g2362 | 1422 | SMART | arm_5 | 1202 | 1241 | IPR000225 | GO:0005515(InterPro) | |
Tan04g2362 | 1422 | SMART | arm_5 | 700 | 743 | IPR000225 | GO:0005515(InterPro) | |
Tan04g2362 | 1422 | SMART | arm_5 | 615 | 655 | IPR000225 | GO:0005515(InterPro) | |
Tan04g2362 | 1422 | SMART | arm_5 | 1156 | 1200 | IPR000225 | GO:0005515(InterPro) | |
Tan04g2362 | 1422 | MobiDBLite | consensus disorder prediction | 421 | 436 | - | - | |
Tan04g2362 | 1422 | SUPERFAMILY | ARM repeat | 588 | 1309 | IPR016024 | - | |
Tan04g2362 | 1422 | MobiDBLite | consensus disorder prediction | 384 | 448 | - | - | |
Tan04g2362 | 1422 | ProSitePatterns | Protein kinases ATP-binding region signature. | 26 | 49 | IPR017441 | GO:0005524(InterPro) | |
Tan04g2362 | 1422 | MobiDBLite | consensus disorder prediction | 324 | 340 | - | - | |
Tan04g2362 | 1422 | MobiDBLite | consensus disorder prediction | 905 | 922 | - | - | |
Tan04g2362 | 1422 | Gene3D | - | 1073 | 1417 | IPR011989 | - | |
Tan04g2362 | 1422 | Gene3D | - | 582 | 784 | IPR011989 | - | |
Tan04g2362 | 1422 | MobiDBLite | consensus disorder prediction | 285 | 358 | - | - | |
Tan04g2362 | 1422 | MobiDBLite | consensus disorder prediction | 840 | 854 | - | - | |
Tan04g2362 | 1422 | MobiDBLite | consensus disorder prediction | 497 | 515 | - | - | |
Tan04g2362 | 1422 | PANTHER | ARMADILLO REPEAT-CONTAINING PROTEIN 3 | 311 | 1422 | IPR052441 | - | |
Tan04g2362 | 1422 | ProSiteProfiles | Protein kinase domain profile. | 20 | 274 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan04g2362 | 1422 | Pfam | Protein kinase domain | 20 | 274 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan04g2362 | 1422 | FunFam | MAP3K epsilon protein kinase 1 | 577 | 785 | - | - | |
Tan04g2362 | 1422 | PRINTS | Tyrosine kinase catalytic domain signature | 200 | 222 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan04g2362 | 1422 | PRINTS | Tyrosine kinase catalytic domain signature | 134 | 152 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan04g2362 | 1422 | PRINTS | Tyrosine kinase catalytic domain signature | 243 | 265 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan04g2362 | 1422 | PRINTS | Tyrosine kinase catalytic domain signature | 96 | 109 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g4298 | Tan-Chr1:107875113 | Tan04g2362 | Tan-Chr4:82123935 | 1.20E-30 | dispersed | |
Tan04g2362 | Tan-Chr4:82123935 | Tan06g2550 | Tan-Chr6:78174735 | 5.00E-63 | dispersed | |
Tan08g0109 | Tan-Chr8:951011 | Tan04g2362 | Tan-Chr4:82123935 | 6.30E-31 | dispersed | |
Tan04g2362 | Tan-Chr4:82123935 | Tan07g0368 | Tan-Chr7:7326783 | 2.10E-53 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67492 | PF00069 | Pkinase | 1.30E-72 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan04g2362 | - | - | - | 0.0 |