Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g2362 ATGTCTCGCCAAGTTCCGACCACTGCGTTCCACAAGTCCAAGACGCTTGATAACAAATATATGCTGGGAGATGAGATCGGGAAAGGAGCATATGGGCGAGTCTACAAAGGTCTGGACTTGGAGAATGGGGACTTTGTTGCTATTAAACAAGTTTCCTTGGAGAATATTGCTCAAGAGGACCTCAACATTATCATGCAAGAGATTGACTTACTGAAGAATTTGAACCACAAAAACATTGTGAAGTATCTTGGATCTCTGAAAACAAAGACTCACCTTCACATAATACTCGAGTATGTGGAGAACGGATCACTTGCCAACATTATCAAGCCAAATAAATTTGGACCTTTTCCAGAATCATTGGTTGCTGTTTATATTTCTCAGGTTTTGGAAGGCTTGGTTTATCTACATGAGCAGGGTGTAATACATCGGGATATAAAGGGTGCGAACATACTGACAACCAAAGAGGGTCTTGTGAAACTTGCTGATTTTGGTGTTGCGACAAAATTAACAGAGGCTGATGTTAATACGCATTCAGTTGTTGGAACACCTTACTGGATGGCTCCTGAGGTAATTGAAATGTCAGGAGTTTGTGCTGCTTCCGACATATGGAGTGTTGGATGTACCGTGATCGAACTACTTACATGCGTACCTCCATATTATGATCTACAACCTATGCCCGCACTTTTTCGCATTGTACAGGACAAGCATCCTCCAATTCCGGATAGCCTATCACCAGACATCACTGATTTCTTACGCCAATGCTTCAAGAAGGATGCTAGGCAAAGGCCTGATGCGAAAACTTTGCTTTCTCATCCTTGGATACAAAACTGTCGACGGGCTTTGCATTCATCTCTTCGTCATAGTGGCACATTGAAAAACACTCAACAAGATGGATCAACAGGAGCAGAAATTTCTAATGGAGACAATCAAAACTCTTGTGAAAGCCCTTCAGCGGAGAAAAATGAAGTTGCTGGTTCTGATTTTAAAGCTGATTCAAGGAAGGAGTTGTCATCAGATGTTGCCACTGATACGAGCAAGTCCCAAAAACATTTTTCTTCAGGCCCTAATTTTGTTGAGGAAGGAGAAAGCCTAGAAGAAGATACTCTATTTGATCAAGTTCCTACCTTATCCATTCATGAAAATTCATCTCTTCTAACTGGTTCTGGCAAACTTGCTACCTCTGAGCCAGCTGAGTTTCCTGAATCTCATGGTAGATCCCATGATGAAGTGGCAATGAATGGTGAAGTGCCATTGGCAGAATTAAGAAAAGATGTTTCTGGGAAACATGGAGAGAAAGAAACTTCTCCAACAGATGGAAATAGATCATTTGGTTTTGGACTTGAAAGTCAAGATAATAGCTTTCAAAAGGTTTCAAAGATGTCAATTGCTTTGGGAGGAAATGAGCTGAGTAAATTTAGCGATACTCCTGGAGATGCATCCTTAGATGATTTATTTCAACCTTTAGATAAGCTCCCCGGGGATCAAGCTGCCGAAGCATCAACATCTCTATCTACCTCACAATCAAACATAGGTAATGTGCCAGTAAATGATGTTGGAAAAAATGACCTGGCCACAAAGTTGAGGGCTACGATTGCTCAGAAACAAATGGAAAATGAGATGGGACAGGCAAATGGTGGTGGTGACCTGCTTCGACTAGTGATGGGTGTTTTAAATGATGATGTTGATATTGATGGTTTGGTTTTTGACGAGAAGTTGCCCGGAGAAAACCTTTATCCCTTGCCGGCTGTTGAATTCGGCAGATTAGTTGGGTCATTGAGACCTGATGAACCCGAAGATGTAATTGTATCTGCCTGTCAAAAACTGATTGCCATCTTCCATCAAAGACCTGAGCAGAAAATTGTTTATGTTACGCAGCATGGTCTACTCCCATTGACAGAGTTGCTTGAAGTTCCTAAAACTCGGATTATATGTTCAGTGCTCCAGCTTATAAATCAGATAGTTAAGGATAACGCTGATTTCCAAGAAAATGCCTGTCTGGTTGGTCTAATTCCTCTGGTAATGGGCTTTGCGGTTCCTGATCGTCCCCGAGAAGTTCGTATGGAAGCAGCTTATTTTTTTCAGCAGCTTTGTCAATCAAGCTCTTTGACATTGCAAATGTTCGTTGCTTGCCGTGGAATACCTGTATTAGTAAGCTTCTTAGAGGCTGATTATGCGAAGTACAGGGAAATGGTTCACCTAGCTATTGATGGAATGTGGCAGATCTTTAAGCTCCAGCGTTCCACTCTTAGAAATGGATTCTGTCGTATAGCAGCAAAAAGTGGAATTCTGCTTAGGCTTATTAACACCCTCTACAGCTTAAACGAGGCAACTCGCTTAGCTTCCATAACAGTTGGGGCTGGAAATCCAGTTGATGGTTTAACTCAGCGGCCACGATCAGGTCAACTAGATCCTAGCCACCCTATATTCAGTCAGTATGAGGCATCATTTCCTGTGCCTGATCAGCCTGATCTTTTGAAGGTCAGGCATGGAATAGTTGATCATCACCTGTCTACTGGAAATGCAGAACCTTCTAGGGCTTCAACTTCACATTCTCAAAGATCAGATGTCAATCAATCTGATCACCGACACTTTTCCACAGATGCTGATAGGTCTCAATCTAGCAATACCACAAATGAAGCGTTGGGACCTTCTAAACCGTCAGAGCTAGCATCTTTAGAAAAAGTTGTAAATTTAGCAACCAAGGAGCCGTCTGGCTCTGCTTCTAAAGAACATGAAAATGTAGATAGATGGAGAACTGAGCGGATGGCCAATTCAAACAGGACTTCCACAGATAGGCCTCCAAAATTGGTGGAACCTGCATCTAATGGGTTTTCTACAGCGTCGGCGGCTACTCAGCAAGAGCAAGTTCGGCCCCTTCTAAGTCTGTTGGACAAAGAACCCCCTTCTCGACATTTTTCCGGTCAGCTTGAGTACATGCGCCACCTTTCTGGATTGGAGAGACATGAAACTATAATGCCTCTATTGCATGCATCAAATGAAAAGAGGATAAATGGGGAGCCTGATTTCTTAATGGCAGAATTTGCTGAGGTTTCTCAACGTGGAAAAGACAATGGAAATCTTGACCCTACTTCCAAGGTTTCCCTTAAAACGGCAGCAAAGAAGGTAGGACCCCTGGTGTCCAATGAAGGAGCTGCTTCCACATCTGGAATTGCCTCACAGACAGCATCTGGGGTACTTTCAGGTTCGGGGGTATTAAATGCTAGACCAGGGAGTGCAACATCCTCTGGACTTCTTTCGCACATGGTTTCGACTATGAACGCTGATGTTGCAAGGGAATATTTGGAGAAGGTGGCTGATCTTCTCCTCGAGTTTGCTCAGGCAGATACAACTGTGAAATCATATATGTGCAGCCAAAGCTTGCTTAATCGCCTTTTCCAGATGTTCAATAGGGTAGAGCCCCCAATTCTTTTGAAGATTTTGAAGTGTGTAAATCATCTATCAACAGATCCAAACTGCTTAGAAAATCTTCAGCGAGCTGATGCAATTAAGTATTTGATTCCGAACCTTGAACTCAAAGAAGGGTCTCTGGTATCGCAAATACACACTGAGGTCCTCAGTGCACTATTCAATTTGTGCAAGATAAATAAGAGGAGGCAAGAATATGCAGCCGAAAATGGAATTATTCCACACTTAATGCATTTTATTATATCAGACTCTCCTCTTAAAAAAGATGCATTGCCTCTACTGTGCGATATGGCCCATGCATCTCGTAATTCTAGGGAGCAGTTAAGAGCCCACGGTGGATTAGATGTGTATTTGAGCCTACTTGAGGATGAGCTTTGGTCTGTCACGGCATTGGATTCTATTGCTGTTTGCTTGGCTCATGACAATGACAACCGAAAAGTTGAACAGGCTTTGCTGAAAAAGGATGCAGTTCAGAAATTGGTGAAGTTTTTCCAGTGCTGTCCAGAACAGCATTTTGTGCATATATTGGAGCCTTTCTTGAAAATCATCACAAAATCTTCCCGAATCAATACGACATTAGCTGTCAATGGATTGACCCCATTGCTTATAGCAAGGCTGGACCATCAGGATGCGATTGCTCGGCTTAATCTACTTAAACTGATAAAGGCTGTGTATGAGCATCATCCACGACCCAAGCAATTGATTGTGGAGAATGATTTACCTCATAAACTTCAGAATTTGATTGAGGAACGCAGAGATGGACAACGGTCTGGTGGCCAAGTGTTGGTGAAACAAATGGCCACATCTCTGCTAAAAGCACTTCATATAAATACCGTTTTGTAA 4269 42.52 MSRQVPTTAFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKTKTHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYISQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDKHPPIPDSLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALHSSLRHSGTLKNTQQDGSTGAEISNGDNQNSCESPSAEKNEVAGSDFKADSRKELSSDVATDTSKSQKHFSSGPNFVEEGESLEEDTLFDQVPTLSIHENSSLLTGSGKLATSEPAEFPESHGRSHDEVAMNGEVPLAELRKDVSGKHGEKETSPTDGNRSFGFGLESQDNSFQKVSKMSIALGGNELSKFSDTPGDASLDDLFQPLDKLPGDQAAEASTSLSTSQSNIGNVPVNDVGKNDLATKLRATIAQKQMENEMGQANGGGDLLRLVMGVLNDDVDIDGLVFDEKLPGENLYPLPAVEFGRLVGSLRPDEPEDVIVSACQKLIAIFHQRPEQKIVYVTQHGLLPLTELLEVPKTRIICSVLQLINQIVKDNADFQENACLVGLIPLVMGFAVPDRPREVRMEAAYFFQQLCQSSSLTLQMFVACRGIPVLVSFLEADYAKYREMVHLAIDGMWQIFKLQRSTLRNGFCRIAAKSGILLRLINTLYSLNEATRLASITVGAGNPVDGLTQRPRSGQLDPSHPIFSQYEASFPVPDQPDLLKVRHGIVDHHLSTGNAEPSRASTSHSQRSDVNQSDHRHFSTDADRSQSSNTTNEALGPSKPSELASLEKVVNLATKEPSGSASKEHENVDRWRTERMANSNRTSTDRPPKLVEPASNGFSTASAATQQEQVRPLLSLLDKEPPSRHFSGQLEYMRHLSGLERHETIMPLLHASNEKRINGEPDFLMAEFAEVSQRGKDNGNLDPTSKVSLKTAAKKVGPLVSNEGAASTSGIASQTASGVLSGSGVLNARPGSATSSGLLSHMVSTMNADVAREYLEKVADLLLEFAQADTTVKSYMCSQSLLNRLFQMFNRVEPPILLKILKCVNHLSTDPNCLENLQRADAIKYLIPNLELKEGSLVSQIHTEVLSALFNLCKINKRRQEYAAENGIIPHLMHFIISDSPLKKDALPLLCDMAHASRNSREQLRAHGGLDVYLSLLEDELWSVTALDSIAVCLAHDNDNRKVEQALLKKDAVQKLVKFFQCCPEQHFVHILEPFLKIITKSSRINTTLAVNGLTPLLIARLDHQDAIARLNLLKLIKAVYEHHPRPKQLIVENDLPHKLQNLIEERRDGQRSGGQVLVKQMATSLLKALHINTVL 1422
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 82123935 82159206 + Tan0015019.1 Tan04g2362 750766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g2362 1422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan04g2362 1422 SMART serkin_6 20 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g2362 1422 MobiDBLite consensus disorder prediction 285 319 - -
Tan04g2362 1422 SUPERFAMILY Protein kinase-like (PK-like) 17 275 IPR011009 -
Tan04g2362 1422 FunFam MAP3K epsilon protein kinase 1-like 1071 1417 - -
Tan04g2362 1422 Gene3D Transferase(Phosphotransferase) domain 1 17 314 - -
Tan04g2362 1422 MobiDBLite consensus disorder prediction 474 517 - -
Tan04g2362 1422 FunFam MAP3K epsilon protein kinase 1 17 306 - -
Tan04g2362 1422 MobiDBLite consensus disorder prediction 836 937 - -
Tan04g2362 1422 CDD STKc_Cdc7_like 19 274 - -
Tan04g2362 1422 MobiDBLite consensus disorder prediction 869 884 - -
Tan04g2362 1422 MobiDBLite consensus disorder prediction 787 806 - -
Tan04g2362 1422 SMART arm_5 1202 1241 IPR000225 GO:0005515(InterPro)
Tan04g2362 1422 SMART arm_5 700 743 IPR000225 GO:0005515(InterPro)
Tan04g2362 1422 SMART arm_5 615 655 IPR000225 GO:0005515(InterPro)
Tan04g2362 1422 SMART arm_5 1156 1200 IPR000225 GO:0005515(InterPro)
Tan04g2362 1422 MobiDBLite consensus disorder prediction 421 436 - -
Tan04g2362 1422 SUPERFAMILY ARM repeat 588 1309 IPR016024 -
Tan04g2362 1422 MobiDBLite consensus disorder prediction 384 448 - -
Tan04g2362 1422 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524(InterPro)
Tan04g2362 1422 MobiDBLite consensus disorder prediction 324 340 - -
Tan04g2362 1422 MobiDBLite consensus disorder prediction 905 922 - -
Tan04g2362 1422 Gene3D - 1073 1417 IPR011989 -
Tan04g2362 1422 Gene3D - 582 784 IPR011989 -
Tan04g2362 1422 MobiDBLite consensus disorder prediction 285 358 - -
Tan04g2362 1422 MobiDBLite consensus disorder prediction 840 854 - -
Tan04g2362 1422 MobiDBLite consensus disorder prediction 497 515 - -
Tan04g2362 1422 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 3 311 1422 IPR052441 -
Tan04g2362 1422 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g2362 1422 Pfam Protein kinase domain 20 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g2362 1422 FunFam MAP3K epsilon protein kinase 1 577 785 - -
Tan04g2362 1422 PRINTS Tyrosine kinase catalytic domain signature 200 222 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan04g2362 1422 PRINTS Tyrosine kinase catalytic domain signature 134 152 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan04g2362 1422 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan04g2362 1422 PRINTS Tyrosine kinase catalytic domain signature 96 109 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4298 Tan-Chr1:107875113 Tan04g2362 Tan-Chr4:82123935 1.20E-30 dispersed
Tan04g2362 Tan-Chr4:82123935 Tan06g2550 Tan-Chr6:78174735 5.00E-63 dispersed
Tan08g0109 Tan-Chr8:951011 Tan04g2362 Tan-Chr4:82123935 6.30E-31 dispersed
Tan04g2362 Tan-Chr4:82123935 Tan07g0368 Tan-Chr7:7326783 2.10E-53 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67492 PF00069 Pkinase 1.30E-72 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g2362 - - - 0.0