Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan04g2376 | ATGTTCAGCTCCAGCAACCTCACCGTCATCTCCTCCGGTGCGTTCCCGTCCCGGAGGTTGGTTCCATGGCAGCTCTTCTTCTTACCCAACATCCAAATTTTGGAAATCTTCATTGCAATGTCTGTTTTTATAGCAATAAAATCATTAAGGGAGAGGGGAAAACAGGGGCTACCTGTGTGGCCGGTCGTTGGAATGCTACCGTCCTTGGTCGCCGGACTCCAAAGCAACCTGTATGAATGGATCACCGAAGCGCTCTACCATCAAAATGGAACTTTCAGATTCAAAGGGCCATGGTTTAGTAGCTTGAATTGTGTTGTAACTTCAGACCCTCGTAACATTGAGCACATTTTGAAAACCGAGTTTCCTCTGTACCCAAAAGGGTCCTTTTTCCGCGACACAGTCCGTGACCTTCTCGGCGACGGAATCTTCAACGCCGACGGTGAGATTTGGCACCGGCAAAGAAAGACGGCAAGCATCGAATTTCATTCAGCAAAGTTTCGGCGACTCACTGTGGAGTCTCTTAACGAGTTAGTCCACTCTCGGCTCCTCCCAGTTTTACACAGGCATTTCATCGAACACTTGATGCCCATAGATCTCCAAGAAATTCTTCTACGCCTGACTTTCGACAATGTCTGTATGATCGCATTCGGCGTCGATCCCGGCTGTTTGAGCCCTAATTTACCGGCGATTCCATTCGCCAACGCCTTCGAGGCGGCAACGGAAGCCACCGTCCTTCGATTCGTAACACCAAATTTCATATGGAAAACGATGCGGTATTTCAATTTAGGGACAGAAAAGAGTCTCAAATTAGCCCTAGAAGAGGTCAATCAATTCGCGGAGAATGTAATTGAAAAGAGGAAAAAAGAGAAGGACGATGAGATCGAGAGATCGGACCTGTTATCGGTGTTCATGGGTCTGAAGGACGGGAACGGGAAGCCGTTTTCGGACAAGTTCTTGAAAGATATCTGCGTGAATTTCATACTTGCCGGAAGAGATACCTCGTCGGTGGCGTTGAGTTGGTTCTTTTGGCTGATTGATCGGAATCCGGAGGTGGAAGAGAGGATTCTCGAGGAGATCCGCCGGATATTGGAGAATAGGGGAGAAACGGCGGCCGGCGATGTGGCGTTTAAAGTAGAAGAGATAAAGAAGATGGAATATTTGCAGGCTGCTCTTTCTGAAGCTCTGAGATTGTTCCCTTCTGTGCCTGTTGATCATAAGGAGGTTATAGAAGATGATGTGTTACCAGATGGAACAAAGCTAAAGAAAGGAACAAAAGTGATCTATGCAATATATGCAATGGGTAGAATGGAAGCCATATGGGGGAAAGATTGTAGAGAATTCAAGCCAGAGAGATGGCTAAGAGACGGTCGGTTCACGGCCGAGTCGGCGTACCGATTCACCGCCTTCAACGGCGGGCCTCGGCTGTGCTTGGGGAAGGACTTTGCCTACTACCAAATGAAGTATACCGCCGCCACCGTCGTCCTCCGCTACCGGGTGAGGGTGGCCGAGAAGCACCCTGTGGTGCCAAAGCTTGCCTTGACAATGTACATGAAGCATGGCTTGAAGTTTCCAACCAAATGGGAAACTCCATGCTGA | 1596 | 48.68 | MFSSSNLTVISSGAFPSRRLVPWQLFFLPNIQILEIFIAMSVFIAIKSLRERGKQGLPVWPVVGMLPSLVAGLQSNLYEWITEALYHQNGTFRFKGPWFSSLNCVVTSDPRNIEHILKTEFPLYPKGSFFRDTVRDLLGDGIFNADGEIWHRQRKTASIEFHSAKFRRLTVESLNELVHSRLLPVLHRHFIEHLMPIDLQEILLRLTFDNVCMIAFGVDPGCLSPNLPAIPFANAFEAATEATVLRFVTPNFIWKTMRYFNLGTEKSLKLALEEVNQFAENVIEKRKKEKDDEIERSDLLSVFMGLKDGNGKPFSDKFLKDICVNFILAGRDTSSVALSWFFWLIDRNPEVEERILEEIRRILENRGETAAGDVAFKVEEIKKMEYLQAALSEALRLFPSVPVDHKEVIEDDVLPDGTKLKKGTKVIYAIYAMGRMEAIWGKDCREFKPERWLRDGRFTAESAYRFTAFNGGPRLCLGKDFAYYQMKYTAATVVLRYRVRVAEKHPVVPKLALTMYMKHGLKFPTKWETPC | 531 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 82323720 | 82334484 | - | Tan0003516.1 | Tan04g2376 | 750780 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan04g2376 | 531 | CDD | CYP86A | 92 | 521 | - | - | |
| Tan04g2376 | 531 | Gene3D | Cytochrome P450 | 54 | 527 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g2376 | 531 | PRINTS | E-class P450 group I signature | 476 | 499 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g2376 | 531 | PRINTS | E-class P450 group I signature | 338 | 364 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g2376 | 531 | PRINTS | E-class P450 group I signature | 318 | 335 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g2376 | 531 | PRINTS | E-class P450 group I signature | 388 | 406 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g2376 | 531 | PRINTS | E-class P450 group I signature | 466 | 476 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g2376 | 531 | PANTHER | CYTOCHROME P450 | 46 | 521 | - | - | |
| Tan04g2376 | 531 | FunFam | Cytochrome P450 | 47 | 527 | - | - | |
| Tan04g2376 | 531 | Pfam | Cytochrome P450 | 57 | 514 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g2376 | 531 | SUPERFAMILY | Cytochrome P450 | 56 | 522 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g2376 | 531 | PRINTS | P450 superfamily signature | 329 | 346 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g2376 | 531 | PRINTS | P450 superfamily signature | 476 | 487 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g2376 | 531 | PRINTS | P450 superfamily signature | 467 | 476 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g2376 | 531 | PRINTS | P450 superfamily signature | 389 | 400 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g2376 | 531 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 469 | 478 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan03g1406 | Tan-Chr3:70542435 | Tan04g2376 | Tan-Chr4:82323720 | 5.60E-97 | dispersed | |
| Tan04g2376 | Tan-Chr4:82323720 | Tan07g1627 | Tan-Chr7:67732911 | 2.60E-121 | dispersed | |
| Tan04g2376 | Tan-Chr4:82323720 | Tan06g0645 | Tan-Chr6:4891811 | 6.00E-203 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan04g2376 | K15402 | - | vvi:100254406 | 743.806 |