Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g2509 ATGCCGATGGATACCTCTGCAGTTTCCGGGCAAATTGTGTGTGTCACCGGCGCCGGAGGCTTCATTGCTTCTTGGCTTGTCAAGCTCCTTCTTGAAAAGGGCTACACTGTTAGAGGAACTGTTAGAAATGCTGATGATCAAAAGAATGCCCATTTGAAGGATTTGGAAGGAGCTGAAGAGAGGCTGTCTTTGTTTAGTGCTGATCTTCTTGATTTTGAGAGCCTTAAAGCTGCCATTATGGGTTGTGATGGCGTTTTCCACACCGCGTCTCCGGTCACCGATGATCCCGAAAAGGTGGAGCAAGCCATAATCGGGACAAAGAACGTCATGGCCGCTGCTGCCGAAGCAAGAGTTCGACGGGTGGTGTTCACGTCGTCGATCGGCACCGTCTACATGAACCCTAACCGGAGCCCAGACACGGTGGTGGATGAGTCTTGTTGGAGTGACCTTGACTTTTGCAAGAACACCAAGAATTGGTATTGCTATGCAAAGACAATAGCAGAACAGACAGCATGGGAAGTGGCAAAAGAAAAAGGAGTGGATTTAGTAGTTGTGAATCCAATGTTGGTGTTGGGACCTTTGTTGCAAGTTGGTGTGAATGCAAGTGTTGTTCATATAATGAAATATTTGACAGGATCAGCAAAGACATATGTGAATGCTGTACAAGGTTATGTTGATGTTAAAGATGTCGCAAAAGCTCATCTTTTAGTTTATGAAACTCCTTCAGCTTCAGGCAGATATATTTGTGTTGAGAGCATGCTCCACCGTGGAGAATTGGTTGATATTCTTGCCATGTTATTCCCCGAATATCCTCTCCCCACCAAGTGTTCTGATGAGATAAATCCCAGAAAGAAACCTTACAAATACAGTGTTGAGAAACTCAAGTCATTGGGAATGGAATTCACACCAATCAAACAATGCATTTATGAAACTGTGAAGAGCTTACAAGAAAAGGGTCATCTTCCTCTTCCCTCCCAACTTCAACAATGA 990 44.55 MPMDTSAVSGQIVCVTGAGGFIASWLVKLLLEKGYTVRGTVRNADDQKNAHLKDLEGAEERLSLFSADLLDFESLKAAIMGCDGVFHTASPVTDDPEKVEQAIIGTKNVMAAAAEARVRRVVFTSSIGTVYMNPNRSPDTVVDESCWSDLDFCKNTKNWYCYAKTIAEQTAWEVAKEKGVDLVVVNPMLVLGPLLQVGVNASVVHIMKYLTGSAKTYVNAVQGYVDVKDVAKAHLLVYETPSASGRYICVESMLHRGELVDILAMLFPEYPLPTKCSDEINPRKKPYKYSVEKLKSLGMEFTPIKQCIYETVKSLQEKGHLPLPSQLQQ 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 84039037 84041261 - Tan0002374.1 Tan04g2509 750913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g2509 329 CDD FR_SDR_e 13 298 - -
Tan04g2509 329 Gene3D - 3 329 - -
Tan04g2509 329 FunFam Cinnamoyl-CoA reductase 1 4 329 - -
Tan04g2509 329 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 316 IPR036291 -
Tan04g2509 329 Coils Coil 41 61 - -
Tan04g2509 329 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 314 IPR050425 GO:0016616(PANTHER)
Tan04g2509 329 Pfam NAD dependent epimerase/dehydratase family 13 244 IPR001509 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2509 Tan-Chr4:84039037 Tan04g2511 Tan-Chr4:84064371 5.60E-183 dispersed
Tan04g2509 Tan-Chr4:84039037 Tan04g2510 Tan-Chr4:84046256 2.40E-162 tandem
Tan04g2509 Tan-Chr4:84039037 Tan06g0468 Tan-Chr6:3411935 8.70E-152 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g2509 K09753 - csv:116401668 607.831