Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g2510 ATGCCGATCGATACCTCTGCAGTTTCCGGCCAAATTGTGTGTGTCACCGGCGCCGGAGGCTTCATTGCTTCTTGGCTTGTCAAACTCCTTCTTGAGAAGGGCTACATTAATGCTCATTTGAAGGACTTGAAAGGAGCTAAAGAGAGGTTGTCTTTGTTTAGTGCTGATCTTCTTGATTTTGAGAGCCTTAAAGCTGCCATTATGGGTTGTGATGGCGTTTTCCACACCGCGTCTCCGGTCACGGATGATCCCGAAAAGGTGGAGCAAGCCATAATTGGGACAAAGAATGTCATGACCGCTGCCGCCGAAGCAAAAGTTCGACGGGTGGTGTTCACGTCATCGATCGGCACCGTCTACATGAACCCTAACCGGAGCCCGGACACGGTGGTGGATGAGTCTTGTTGGAGTGACCTTGACTTTTGCAAGAACACCAAGAATTGGTATTGCTATGCAAAGACAATAGCAGAACAGACAGCATGGGAAGTGGCAAAAGAAAGAGGAGTAGATTTAGTAGTTGTGAATCCAATGTTGGTGTTGGGATCTTTGTTGCAAGCTGGTGTGAATGCAAGTGTGGTTCACATAATGAAATATTTGACAGGATCTGCAAAAACATATGTAAATGCTGTACAAGGTTATGTCGATGTTAAGGATGTCGCAAAAGCTCATCTTTTGGTTTATGAAACTCATTCAGCTTCAGGCAGATATATTTGTGTTGAAAGTATGCTTCATCGCGGAGAATTGGTCGATATTCTTGCCAAATTATTCCCTGAATATCCCCTCCCAACCAAGTGTTCTGATGAGGTAAATCCCAGAAAGAAACCTTACAAATACAGTGTTGAGAAACTCAAGTCATTGGGAATGGAATTCACACCAATCAAACAATGCATTTATGAAACTTTTATTAAATCTTATATTAAAAAAATTATAATTGATTGA 936 42.52 MPIDTSAVSGQIVCVTGAGGFIASWLVKLLLEKGYINAHLKDLKGAKERLSLFSADLLDFESLKAAIMGCDGVFHTASPVTDDPEKVEQAIIGTKNVMTAAAEAKVRRVVFTSSIGTVYMNPNRSPDTVVDESCWSDLDFCKNTKNWYCYAKTIAEQTAWEVAKERGVDLVVVNPMLVLGSLLQAGVNASVVHIMKYLTGSAKTYVNAVQGYVDVKDVAKAHLLVYETHSASGRYICVESMLHRGELVDILAKLFPEYPLPTKCSDEVNPRKKPYKYSVEKLKSLGMEFTPIKQCIYETFIKSYIKKIIID 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 84046256 84049570 - Tan0012622.1 Tan04g2510 750914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g2510 311 FunFam Cinnamoyl-CoA reductase 1 6 311 - -
Tan04g2510 311 Pfam NAD dependent epimerase/dehydratase family 13 231 IPR001509 -
Tan04g2510 311 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 299 IPR036291 -
Tan04g2510 311 CDD FR_SDR_e 13 286 - -
Tan04g2510 311 Gene3D - 3 311 - -
Tan04g2510 311 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 298 IPR050425 GO:0016616(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2510 Tan-Chr4:84046256 Tan04g2512 Tan-Chr4:84076667 1.50E-140 dispersed
Tan04g2509 Tan-Chr4:84039037 Tan04g2510 Tan-Chr4:84046256 2.40E-162 tandem
Tan04g2510 Tan-Chr4:84046256 Tan04g2511 Tan-Chr4:84064371 1.00E-162 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g2510 K09753 - csv:116401668 546.584