Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g2511 ATGCCGATCGATACCTCTGCAATTTCCGGCCAAATTGTGTGTGTCACCGGCGCCGGAGGCTTCATTGCTTCTTGGCTTGTCAAGCTCCTTCTTGAAAAGGGCTACACTGTTAGAGGAACTGTTAGAAATGCTGATGATCAAAAGAATGCCCATTTGAAGGACTTGGAAGGAGCTGAAGAGAGGCTGTCGTTGTTTAGTGCTGATCTTCTTGATTTTGAGAGCCTTAAAGCTGCCATTATGGGTTGTGATGGCGTTTTCCACACCGCGTCTCCGGTCACCGATGATCCCGAAAAGGTAGAACAAGCTATAATCGGGACGAAGAATGTCATGGCCGCTGCCGCCGAAGCAAGAGTTCGACGGGTGGTGTTCACGTCGTCGATCGGCACCGTCTACATGAACCCTAACCGGAGCCCAGACACGGTGGTGGATGAGTCTTGTTGGAGTGACCTTGACTTTTGCAAGAACACCAAGAATTGGTATTGCTATGCAAAGACAATAGCAGAACAGACAGCATGGGAAGTGGCAAAAGAAAGAGGAGTGGATTTAGTAGTTGTGAATCCAATGTTGGTGTTGGGACCTTTGTTGCAAGCTGGTGTGAATGCAAGTGTGGTTCATATAATGAAATATTTGACAGGATCTGCAAAGACATATGTAAATGCTGTACAAGGTTATGTTAATGTTAAGGATGTCGCAAAAGCTCATCTTTTGGTTTATGAAACTCATTCAGCTTCAGGCAGATATATTTGTGTTGAAAGTATGCTTCATCGCGGAGAATTGGTTGATATTCTTTCCAAGTTCTTTCCCGAATATCCTATTCCCACCAAGTGCTCTGATGAGGTGAATCCCAAAAAGAAACCTTACAAATACAGTGTTGAGAAACTCAAGTCATTGGGAATGGAATTCACACCAATCAAACAATGCATTTATGAAACTGTGAAGAGCTTACAAGAAAAGGGCCATCTTCCACTTCCTTCCCAACTTCAACACTGA 990 44.34 MPIDTSAISGQIVCVTGAGGFIASWLVKLLLEKGYTVRGTVRNADDQKNAHLKDLEGAEERLSLFSADLLDFESLKAAIMGCDGVFHTASPVTDDPEKVEQAIIGTKNVMAAAAEARVRRVVFTSSIGTVYMNPNRSPDTVVDESCWSDLDFCKNTKNWYCYAKTIAEQTAWEVAKERGVDLVVVNPMLVLGPLLQAGVNASVVHIMKYLTGSAKTYVNAVQGYVNVKDVAKAHLLVYETHSASGRYICVESMLHRGELVDILSKFFPEYPIPTKCSDEVNPKKKPYKYSVEKLKSLGMEFTPIKQCIYETVKSLQEKGHLPLPSQLQH 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 84064371 84066036 - Tan0019376.1 Tan04g2511 750915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g2511 329 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 316 IPR036291 -
Tan04g2511 329 Pfam NAD dependent epimerase/dehydratase family 13 243 IPR001509 -
Tan04g2511 329 CDD FR_SDR_e 13 298 - -
Tan04g2511 329 FunFam Cinnamoyl-CoA reductase 1 4 329 - -
Tan04g2511 329 Coils Coil 41 61 - -
Tan04g2511 329 Gene3D - 3 329 - -
Tan04g2511 329 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 314 IPR050425 GO:0016616(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2509 Tan-Chr4:84039037 Tan04g2511 Tan-Chr4:84064371 5.60E-183 dispersed
Tan04g2511 Tan-Chr4:84064371 Tan06g0468 Tan-Chr6:3411935 4.80E-150 dispersed
Tan04g2510 Tan-Chr4:84046256 Tan04g2511 Tan-Chr4:84064371 1.00E-162 tandem
Tan04g2511 Tan-Chr4:84064371 Tan04g2512 Tan-Chr4:84076667 4.30E-159 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g2511 K09753 - csv:116401668 608.601