Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g2512 ATGCCCCTCGCCGCTGCCGCCACCGCCACCGCCACCGCCACCGCTGCCATAGCTTCCGGCCAAACTGTTTGTGTCACCGGCGCCGGTGGCTTCATTGCCTCTTGGCTTGTGAAGCTCCTTCTCCAAAAGGATTACAACGTTAGAGGCACTGTCAGAAACCCAGATGATAGGAAGAATGCTCATTTGAAAGAGCTGGATGGAGCTAAAGAAAGGTTGGCGTTGTACGGTGCTGATCTTCTTGATTTTGAGAGCCTCAAAGTCGCCATTATCGGTTGTGACGGTGTTTTTCACACCGCGTCTCCGGTGACCGATGATCCTGAAAAGGTGGAGCAAGCAATAATCGGGACGAAGAACGTCATAATGGCAGCGGCGGAGGCGAAGGTCCGACGGGTTGTTTTCACATCATCGATCGGAACTGTTTACATGAACCCTAATCGGAGCCCTGACACGGTGGTAGATGAGTCTTGTTGGAGTGACCTTGACTTTTGCAAAAACAGCAATAATTGGTATTGCTATGCAAAAACAATGGCAGAGCAAACAGCATGGGCAATGGCAGAGGAGAAAGGGGTGGATCTAGTGGTGGTTAATCCAATGTTGGTGCTTGGACCATTATTACAAGAAACAATAAATGCAAGTGTAGTTCATATAATGAAGTATTTGACAGGATCTGTCAAGACATTTGTGAATGCTGTTCAAGGATATGTTGATGTTAGAGATGTTGCCAAAGCTCATATTTTGGTTTATGAATCTCCTTCATCCTTTGGTAGATATATTTGTGCTCAAAGTATGCTTCATCGCGGAGAATTGATTGAAATTTTGGCGAAGTTCTTCCCCGAGTATCCCATTCCTATCAAGTGCTCTGACCAGGTAAACCCTAAGAAAAAACCTTACAAATACAGTGTCAAAAAGCTCAAGGATTTGGGCATGGAGTTCATAGCTGTGAAGCAATGCATATATGAAACTGTGAAGAGTCTTCAAGAGAAGGGTCATCTTCCACTCCCAACCCAATCTTAA 1014 45.76 MPLAAAATATATATAAIASGQTVCVTGAGGFIASWLVKLLLQKDYNVRGTVRNPDDRKNAHLKELDGAKERLALYGADLLDFESLKVAIIGCDGVFHTASPVTDDPEKVEQAIIGTKNVIMAAAEAKVRRVVFTSSIGTVYMNPNRSPDTVVDESCWSDLDFCKNSNNWYCYAKTMAEQTAWAMAEEKGVDLVVVNPMLVLGPLLQETINASVVHIMKYLTGSVKTFVNAVQGYVDVRDVAKAHILVYESPSSFGRYICAQSMLHRGELIEILAKFFPEYPIPIKCSDQVNPKKKPYKYSVKKLKDLGMEFIAVKQCIYETVKSLQEKGHLPLPTQS 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 84076667 84083467 - Tan0012849.1 Tan04g2512 750916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g2512 337 Pfam NAD dependent epimerase/dehydratase family 23 253 IPR001509 -
Tan04g2512 337 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 19 326 IPR036291 -
Tan04g2512 337 CDD FR_SDR_e 23 308 - -
Tan04g2512 337 FunFam Cinnamoyl-CoA reductase 1 14 337 - -
Tan04g2512 337 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 22 324 IPR050425 GO:0016616(PANTHER)
Tan04g2512 337 Gene3D - 13 337 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2510 Tan-Chr4:84046256 Tan04g2512 Tan-Chr4:84076667 1.50E-140 dispersed
Tan04g2512 Tan-Chr4:84076667 Tan06g0468 Tan-Chr6:3411935 1.40E-144 dispersed
Tan04g2511 Tan-Chr4:84064371 Tan04g2512 Tan-Chr4:84076667 4.30E-159 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g2512 K09753 - csv:101219069 583.948