Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g2535 ATGCCGAAGCTGGTTTTGAAAGGGGGAAGTAGGCCGCCATGGGTGGGCTTGGCTGCTGCTGTCTGGGTTCAAATAGCTGCTGGTTCTTCTTATAACTTTTCTCTTTACTCTCACTTGCTTAAATCTGTTCTGGGTTTGAATCAGCAGCAGCTTACAGTGCTGGGAGTGGCTAATGATATTGGGGAGAGTGTGGGATTGCTTCCTGGACTTGCTTGTAACAGATTTCCTCCATGGGCTGTGCTTTTGGTTGGTTCTGTGTGTTGCTTTGTGGGTTATGGAGCTATTTGGCTTGCTGTTAGCAGAACTGTTCCCAATCTGCCTTATTGGCTGCTATGGCTCACACATTGTATTGCTACAAATAGCAATGCATGGTTCGGAACAGCCGTGCTCGTAACCAACATGAGGAACTTCCCTCTCAGTAGGGGTACCGTTGCTGGCATTCTCAAAGGTTATGTCGGGCTTAGTGCTGCTGTATACACAGTGATATACAGCATGGTGCTCAGAAAGTCTGCTTTGGATTTACTGATGTTTCTTGCGATTGGAATACCCATTTTGTGCATAGCCTTGATGTACTTTGTTCGACCTTGTACTCCGGCTTCTTCAGAGGATGCATCTGAGCGCGGTCATTTTCTTTTCACGCAAGCTGCTTGTGTTTTGCTAGCTGTTTTTCTAGTCTCGACCACAATTCTAGATGCAACAACAACCCCTAGTGATGCCGTTGCATACACCTTGGTTGCCATAATGGTTATCCTTTTAATGTCTCCTCTTGCAGTTCCCATAAAAATGACCATTTGTTCTGCAAAGATGAAAAAACTTGGCCCTCGAGTTGACTCTGCAGAACCTTTGGCTTCCGAAGAAAGCGATTCTTCCCAAATAGAACCTTTATTGACACCATCTTCCTCAGCTACAAACCTTGGAAGTTTCTATGAGAATGATGATGCATCAGATGTAGAAACACTTCTTGCTGTGGGTGAGGGGGCAATTCATAAGAAGAAGAGAAGACCTAAAAGAGGGGAAGATTTCAAGCTCCGTGAAGCCGTAATCAAAGCTGATTTTTGGCTGCTTTGGTTCTTGTACTTCCTCGGGGTCGGTCCAGGAATAACGGTTCTCAACAATTTGTCTCAAATTGGGATTTCATTAGGTGTTAATGACACAACATTGCTGTTGGCTCTTTTCAGCTTCTGCAACTTTATTGGTCGTCTAGGCTCCGGTGTTATTTCCGAACACTTTGTCAGGTCGAGAATGATACCTCGCTCGCTCTGGATGATGTTTGCACTAATACTCATGGCTATAGCATTCCTCCTGTATGCGTCCGCTCTCACGAGTACTCTCTACGTTGCCACCGGTCTTACTGGAATCAGCTATGGAATTCTATATTCAATGATGGTCCCTCTCGCATCTGAGATTTTCGGCCTAAAGAATTTCGGAGTGATCTTCAACTTCATGCAGCTTGGGAATCCAATAGGAGCAGTCCTTTTCTCGGTTCTACTCGCCAGTACTTTATACGACAATGAAGCTGCTAAGCAAGGTTCAATAACCTGCATAGGTCAACAGTGCTTCAGGACTACTTTCTTCGTTCTTTCGGGCGTTGCGGGGTTAGGTTCGATTTTGAGCATAATTCTGACTGTTAGATTAAGGCCAGTCTATCAAATGCTTTACGCCGGTGGCTCGTTCCGCTTGCCTCAAAGTTCAGGTCATTGA 1701 45.27 MPKLVLKGGSRPPWVGLAAAVWVQIAAGSSYNFSLYSHLLKSVLGLNQQQLTVLGVANDIGESVGLLPGLACNRFPPWAVLLVGSVCCFVGYGAIWLAVSRTVPNLPYWLLWLTHCIATNSNAWFGTAVLVTNMRNFPLSRGTVAGILKGYVGLSAAVYTVIYSMVLRKSALDLLMFLAIGIPILCIALMYFVRPCTPASSEDASERGHFLFTQAACVLLAVFLVSTTILDATTTPSDAVAYTLVAIMVILLMSPLAVPIKMTICSAKMKKLGPRVDSAEPLASEESDSSQIEPLLTPSSSATNLGSFYENDDASDVETLLAVGEGAIHKKKRRPKRGEDFKLREAVIKADFWLLWFLYFLGVGPGITVLNNLSQIGISLGVNDTTLLLALFSFCNFIGRLGSGVISEHFVRSRMIPRSLWMMFALILMAIAFLLYASALTSTLYVATGLTGISYGILYSMMVPLASEIFGLKNFGVIFNFMQLGNPIGAVLFSVLLASTLYDNEAAKQGSITCIGQQCFRTTFFVLSGVAGLGSILSIILTVRLRPVYQMLYAGGSFRLPQSSGH 566
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 84370232 84374403 + Tan0019098.1 Tan04g2535 750939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g2535 566 Gene3D MFS general substrate transporter like domains 346 549 IPR036259 -
Tan04g2535 566 Pfam Major Facilitator Superfamily 357 546 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Tan04g2535 566 CDD MFS_Mch1p_like 12 534 - -
Tan04g2535 566 ProSiteProfiles Major facilitator superfamily (MFS) profile. 346 566 IPR020846 GO:0022857(InterPro)
Tan04g2535 566 MobiDBLite consensus disorder prediction 280 299 - -
Tan04g2535 566 SUPERFAMILY MFS general substrate transporter 330 547 IPR036259 -
Tan04g2535 566 MobiDBLite consensus disorder prediction 283 299 - -
Tan04g2535 566 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 13 549 - GO:0016020(PANTHER)
Tan04g2535 566 Pfam Nodulin-like 13 260 IPR010658 -
Tan04g2535 566 SUPERFAMILY MFS general substrate transporter 11 198 IPR036259 -
Tan04g2535 566 Gene3D MFS general substrate transporter like domains 8 276 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2535 Tan-Chr4:84370232 Tan05g1157 Tan-Chr5:10546122 1.20E-95 dispersed
Tan04g2535 Tan-Chr4:84370232 Tan04g2536 Tan-Chr4:84370232 3.00E-232 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g2535 - - - 0.0