Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan04g2535 | ATGCCGAAGCTGGTTTTGAAAGGGGGAAGTAGGCCGCCATGGGTGGGCTTGGCTGCTGCTGTCTGGGTTCAAATAGCTGCTGGTTCTTCTTATAACTTTTCTCTTTACTCTCACTTGCTTAAATCTGTTCTGGGTTTGAATCAGCAGCAGCTTACAGTGCTGGGAGTGGCTAATGATATTGGGGAGAGTGTGGGATTGCTTCCTGGACTTGCTTGTAACAGATTTCCTCCATGGGCTGTGCTTTTGGTTGGTTCTGTGTGTTGCTTTGTGGGTTATGGAGCTATTTGGCTTGCTGTTAGCAGAACTGTTCCCAATCTGCCTTATTGGCTGCTATGGCTCACACATTGTATTGCTACAAATAGCAATGCATGGTTCGGAACAGCCGTGCTCGTAACCAACATGAGGAACTTCCCTCTCAGTAGGGGTACCGTTGCTGGCATTCTCAAAGGTTATGTCGGGCTTAGTGCTGCTGTATACACAGTGATATACAGCATGGTGCTCAGAAAGTCTGCTTTGGATTTACTGATGTTTCTTGCGATTGGAATACCCATTTTGTGCATAGCCTTGATGTACTTTGTTCGACCTTGTACTCCGGCTTCTTCAGAGGATGCATCTGAGCGCGGTCATTTTCTTTTCACGCAAGCTGCTTGTGTTTTGCTAGCTGTTTTTCTAGTCTCGACCACAATTCTAGATGCAACAACAACCCCTAGTGATGCCGTTGCATACACCTTGGTTGCCATAATGGTTATCCTTTTAATGTCTCCTCTTGCAGTTCCCATAAAAATGACCATTTGTTCTGCAAAGATGAAAAAACTTGGCCCTCGAGTTGACTCTGCAGAACCTTTGGCTTCCGAAGAAAGCGATTCTTCCCAAATAGAACCTTTATTGACACCATCTTCCTCAGCTACAAACCTTGGAAGTTTCTATGAGAATGATGATGCATCAGATGTAGAAACACTTCTTGCTGTGGGTGAGGGGGCAATTCATAAGAAGAAGAGAAGACCTAAAAGAGGGGAAGATTTCAAGCTCCGTGAAGCCGTAATCAAAGCTGATTTTTGGCTGCTTTGGTTCTTGTACTTCCTCGGGGTCGGTCCAGGAATAACGGTTCTCAACAATTTGTCTCAAATTGGGATTTCATTAGGTGTTAATGACACAACATTGCTGTTGGCTCTTTTCAGCTTCTGCAACTTTATTGGTCGTCTAGGCTCCGGTGTTATTTCCGAACACTTTGTCAGGTCGAGAATGATACCTCGCTCGCTCTGGATGATGTTTGCACTAATACTCATGGCTATAGCATTCCTCCTGTATGCGTCCGCTCTCACGAGTACTCTCTACGTTGCCACCGGTCTTACTGGAATCAGCTATGGAATTCTATATTCAATGATGGTCCCTCTCGCATCTGAGATTTTCGGCCTAAAGAATTTCGGAGTGATCTTCAACTTCATGCAGCTTGGGAATCCAATAGGAGCAGTCCTTTTCTCGGTTCTACTCGCCAGTACTTTATACGACAATGAAGCTGCTAAGCAAGGTTCAATAACCTGCATAGGTCAACAGTGCTTCAGGACTACTTTCTTCGTTCTTTCGGGCGTTGCGGGGTTAGGTTCGATTTTGAGCATAATTCTGACTGTTAGATTAAGGCCAGTCTATCAAATGCTTTACGCCGGTGGCTCGTTCCGCTTGCCTCAAAGTTCAGGTCATTGA | 1701 | 45.27 | MPKLVLKGGSRPPWVGLAAAVWVQIAAGSSYNFSLYSHLLKSVLGLNQQQLTVLGVANDIGESVGLLPGLACNRFPPWAVLLVGSVCCFVGYGAIWLAVSRTVPNLPYWLLWLTHCIATNSNAWFGTAVLVTNMRNFPLSRGTVAGILKGYVGLSAAVYTVIYSMVLRKSALDLLMFLAIGIPILCIALMYFVRPCTPASSEDASERGHFLFTQAACVLLAVFLVSTTILDATTTPSDAVAYTLVAIMVILLMSPLAVPIKMTICSAKMKKLGPRVDSAEPLASEESDSSQIEPLLTPSSSATNLGSFYENDDASDVETLLAVGEGAIHKKKRRPKRGEDFKLREAVIKADFWLLWFLYFLGVGPGITVLNNLSQIGISLGVNDTTLLLALFSFCNFIGRLGSGVISEHFVRSRMIPRSLWMMFALILMAIAFLLYASALTSTLYVATGLTGISYGILYSMMVPLASEIFGLKNFGVIFNFMQLGNPIGAVLFSVLLASTLYDNEAAKQGSITCIGQQCFRTTFFVLSGVAGLGSILSIILTVRLRPVYQMLYAGGSFRLPQSSGH | 566 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 84370232 | 84374403 | + | Tan0019098.1 | Tan04g2535 | 750939 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan04g2535 | 566 | Gene3D | MFS general substrate transporter like domains | 346 | 549 | IPR036259 | - | |
Tan04g2535 | 566 | Pfam | Major Facilitator Superfamily | 357 | 546 | IPR011701 | GO:0022857(InterPro)|GO:0055085(InterPro) | |
Tan04g2535 | 566 | CDD | MFS_Mch1p_like | 12 | 534 | - | - | |
Tan04g2535 | 566 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 346 | 566 | IPR020846 | GO:0022857(InterPro) | |
Tan04g2535 | 566 | MobiDBLite | consensus disorder prediction | 280 | 299 | - | - | |
Tan04g2535 | 566 | SUPERFAMILY | MFS general substrate transporter | 330 | 547 | IPR036259 | - | |
Tan04g2535 | 566 | MobiDBLite | consensus disorder prediction | 283 | 299 | - | - | |
Tan04g2535 | 566 | PANTHER | UNCHARACTERIZED NODULIN-LIKE PROTEIN | 13 | 549 | - | GO:0016020(PANTHER) | |
Tan04g2535 | 566 | Pfam | Nodulin-like | 13 | 260 | IPR010658 | - | |
Tan04g2535 | 566 | SUPERFAMILY | MFS general substrate transporter | 11 | 198 | IPR036259 | - | |
Tan04g2535 | 566 | Gene3D | MFS general substrate transporter like domains | 8 | 276 | IPR036259 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan04g2535 | Tan-Chr4:84370232 | Tan05g1157 | Tan-Chr5:10546122 | 1.20E-95 | dispersed | |
Tan04g2535 | Tan-Chr4:84370232 | Tan04g2536 | Tan-Chr4:84370232 | 3.00E-232 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan04g2535 | - | - | - | 0.0 |