Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g2536 ATGCCGAAGCTGGTTTTGAAAGGGGGAAGTAGGCCGCCATGGGTGGGCTTGGCTGCTGCTGTCTGGGTTCAAATAGCTGCTGGTTCTTCTTATAACTTTTCTCTTTACTCTCACTTGCTTAAATCTGTTCTGGGTTTGAATCAGCAGCAGCTTACAGTGCTGGGAGTGGCTAATGATATTGGGGAGAGTGTGGGATTGCTTCCTGGACTTGCTTGTAACAGATTTCCTCCATGGGCTGTGCTTTTGGTTGGTTCTGTGTGTTGCTTTGTGGGTTATGGAGCTATTTGGCTTGCTGTTAGCAGAACTGTTCCCAATCTGCCTTATTGGCTGCTATGGCTCACACATTGTATTGCTACAAATAGCAATGCATGGTTCGGAACAGCCGTGCTCGTAACCAACATGAGGAACTTCCCTCTCAGTAGGGGTACCGTTGCTGGCATTCTCAAAGGTTATGTCGGGCTTAGTGCTGCTGTATACACAGTGATATACAGCATGGTGCTCAGAAAGTCTGCTTTGGATTTACTGATGTTTCTTGCGATTGGAATACCCATTTTGTGCATAGCCTTGATGTACTTTGTTCGACCTTGTACTCCGGCTTCTTCAGAGGATGCATCTGAGCGCGGTCATTTTCTTTTCACGCAAGCTGCTTGTGTTTTGCTAGCTGTTTTTCTAGTCTCGACCACAATTCTAGATGCAACAACAACCCCTAGTGATGCCGTTGCATACACCTTGGTTGCCATAATGGTTATCCTTTTAATGTCTCCTCTTGCAGTTCCCATAAAAATGACCATTTGTTCTGCAAAGATGAAAAAACTTGGCCCTCGAGTTGACTCTGCAGAACCTTTGGCTTCCGAAGAAAGCGATTCTTCCCAAATAGAACCTTTATTGACACCATCTTCCTCAGCTACAAACCTTGGAAGTTTCTATGAGAATGATGATGCATCAGATGTAGAAACACTTCTTGCTGTGGGTGAGGGGGCAATTCATAAGAAGAAGAGAAGACCTAAAAGAGGGGAAGATTTCAAGCTCCGTGAAGCCGTAATCAAAGCTGATTTTTGGCTGCTTTGGTTCTTGTACTTCCTCGGGGTCGGTCCAGGAATAACGGTTCTCAACAATTTGTCTCAAATTGGGATTTCATTAGGTGTTAATGACACAACATTGCTGTTGGCTCTTTTCAGCTTCTGCAACTTTATTGGTCGTCTAGGCTCCGGTGTTATTTCCGAACACTTTGTCAGGTAA 1239 44.87 MPKLVLKGGSRPPWVGLAAAVWVQIAAGSSYNFSLYSHLLKSVLGLNQQQLTVLGVANDIGESVGLLPGLACNRFPPWAVLLVGSVCCFVGYGAIWLAVSRTVPNLPYWLLWLTHCIATNSNAWFGTAVLVTNMRNFPLSRGTVAGILKGYVGLSAAVYTVIYSMVLRKSALDLLMFLAIGIPILCIALMYFVRPCTPASSEDASERGHFLFTQAACVLLAVFLVSTTILDATTTPSDAVAYTLVAIMVILLMSPLAVPIKMTICSAKMKKLGPRVDSAEPLASEESDSSQIEPLLTPSSSATNLGSFYENDDASDVETLLAVGEGAIHKKKRRPKRGEDFKLREAVIKADFWLLWFLYFLGVGPGITVLNNLSQIGISLGVNDTTLLLALFSFCNFIGRLGSGVISEHFVR 412
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 84370232 84374403 + Tan0019098.2 Tan04g2536 750940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g2536 412 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 13 412 - GO:0016020(PANTHER)
Tan04g2536 412 MobiDBLite consensus disorder prediction 280 299 - -
Tan04g2536 412 MobiDBLite consensus disorder prediction 283 299 - -
Tan04g2536 412 SUPERFAMILY MFS general substrate transporter 11 198 IPR036259 -
Tan04g2536 412 Gene3D MFS general substrate transporter like domains 7 276 IPR036259 -
Tan04g2536 412 Pfam Nodulin-like 13 260 IPR010658 -
Tan04g2536 412 SUPERFAMILY MFS general substrate transporter 330 410 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2536 Tan-Chr4:84370232 Tan11g0143 Tan-Chr11:1360866 3.60E-70 dispersed
Tan04g2535 Tan-Chr4:84370232 Tan04g2536 Tan-Chr4:84370232 3.00E-232 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g2536 - - - 0.0