Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g2586 ATGGCGCATATTCTGATTCATGGCACCCTTCACGTCACCATTTATGAGGTGGATAAGCTTCATTCCGGTGGTCGCAATTTTTTAAAAACGTTGGTTGAAAACGTAGAGGAAGCAGTGGGGTTTGGCAGAGGAGTAACGAGGCTATACGCAACCATTGATTTAGAAAAGGCGAGAGTTGGAAGAACAAGAAGACTCGAGAAAGAACATACAAATCCAAAATGGTACGAAACTTTCCACATTTACTGTGCTCACATGGCTTCCAACATCATCTTCACTGTCAAAGACGACAACCCAATTGGAGCAACCTTAATCGGCCGAGCATATTTGCCTGTCAAAGAGATCATAACCGGCGAAGAAGTTGACCAATGGGTTCCAATCTTAGACGAACGCAAGAATCCCATTCGTGGGAACCCCAAAATTCATGTCAAATTACAGTATTTCGATGTCACAAAGGATCAAAACTGGGGCCGTGGCATCAAAAGCCCCAAGTTTCCTGGAGTTCCCTACACTTTTTTCTCTCAACGACGAGGCTGTAAGGTAACTTTGTATCAAGATGCTCACGTTCCTGACAATTTTATCCCTAAAATCCCTCTTGCTGGGGGCAGGTTTTATGAGCCAAATAGATGTTGGGAAGATGTTTTTGATGCAATTACTAATGCTAAACACTTGATTTACATTACTGGCTGGTCTGTTTATACTGAGATTTCTTTGGTGAGAGATAAAAGAAGGCCAAAGCCTGGTGGAGATGTAATGCTTGGTGAATTGCTTAAGAGAAAAGCTAGTGAAGGAGTTAGAGTTCTTTTGCTTGTTTGGAATGATACAACTTCTGTGCCTATATTGAAGGAGGATGGGCTAATGGCAACTCATGATGAAGATACTGCTAAGTACTTTGCTAATTCTGATGTGCATTGTGTTTTGTGTCCTCGCAATCCAGATGATGGGGCTAATGTTATTCAGGATATTGCTGTTGGGACAATGTTTACTCATCATCAGAAGATTGTTGTTGTGGACAGTGCTTTGCCTAGTGGAGATCCAAATAGAAGGAGAATTGTGAGTTTTGTTGGTGGGATTGATCTTTGTGATGGTAGATACGATACTCCATTTCATTCCCTTTTCAGGACTTTGGATTCTGCTCATCATGATGATTTCCATCAGCCAAACTTCACTGGTACTTCCATAAACAAAGGCGGTCCAAGAGAGCCGTGGCACGATATCCATTCCCGGCTCGAAGGACCCGTTGCGTGGGATGTTTTGTACAACTTTGAGCAGAGATGGAAGAAGCAAGGTGGGAAGGATTTTCTTTTGAATTTGAGGGATTTGGATGAGATCTTCATCACTCCATCACCTGTGATGTTCCCTGATGACTTTGACAGTTGGAATGTTCAAGTGTTCAGGTCGATCGACGGTGGGGCGGCTTTTGGCTTCCCCGACTCGCCGGAAGAAGCAGCCAAAGCAGGGCTTATAAGTGGAAAGGACAACACTATTGATCGAAGTATTCAAGATGCTTACATTAATGCCATTAGGCGAGCTAAGAATTTCATATACATTGAAAACCAGTATTTCCTTGGAAGCTCGTTTGAATGGAGAGGTTCTGATGTGAAGCCTGAGATGATCAATGCCCTGCATCTAATCCCAAAGGAACTTTCACTTAAGATTGTGAGTAAGATTGAAGCTCGAGAGCGGTTCACCGTGTATGTCGTCGTCCCGATGTGGCCGGAAGGATTTCCGGAGGGGGGAACAGTTCAAGCAATATTAGATTGGCAAAGAAGAACAATGGAGATGATGTATAAAGATATAGTTCTAGCTCTTAGAGCTAATGGCATTGAAGAGGATCCAAGAAACTATCTGACATTCTTTTGTGTAGGCAATAGGGAAGTTAAGAAGCCTGGAGAATATGAGCCATCAGAATCACCTGAAGAAAATTCTGATTACCTTAGAGCCCAAAAAGCCAGGCGCTTCATGATTTATGTTCATGCCAAGATGATGATTGTTGACGATGAATACATAATAGTGGGATCAGCCAACATCAACCAAAGATCAATGGATGGAGCAAGGGACTCAGAGATCGCCATGGGAGCTTACCAGCCATTTCATTTGTCAAATCGAGAGCCAGCAAGAGGCCAAGTTCATGGCTTCCGTTTGGCATTATGGTATGAACATTTAGGCTTGCTTCATGAATCCTTCCTCTTTCCAGAAAGCATTGAGTGTGTTAGAAGAGTAAACCAACTTGCTGAAAAATATTGGGACCTATACTCAAGTGATACCTTTGAACATGACCTTCCCGGCCACTTGCTTCGCTACCCGATCGGCGTCTCCGGTGACGGTGAGATTACCGAGCTTCCGGGATTCGAGTTCTTCCCTGATACCAAGGCGCGAGTTCTAGGTAACAAGTCTAATTATCTCCCTCCAATCCTCACTACTTGA 2424 43.48 MAHILIHGTLHVTIYEVDKLHSGGRNFLKTLVENVEEAVGFGRGVTRLYATIDLEKARVGRTRRLEKEHTNPKWYETFHIYCAHMASNIIFTVKDDNPIGATLIGRAYLPVKEIITGEEVDQWVPILDERKNPIRGNPKIHVKLQYFDVTKDQNWGRGIKSPKFPGVPYTFFSQRRGCKVTLYQDAHVPDNFIPKIPLAGGRFYEPNRCWEDVFDAITNAKHLIYITGWSVYTEISLVRDKRRPKPGGDVMLGELLKRKASEGVRVLLLVWNDTTSVPILKEDGLMATHDEDTAKYFANSDVHCVLCPRNPDDGANVIQDIAVGTMFTHHQKIVVVDSALPSGDPNRRRIVSFVGGIDLCDGRYDTPFHSLFRTLDSAHHDDFHQPNFTGTSINKGGPREPWHDIHSRLEGPVAWDVLYNFEQRWKKQGGKDFLLNLRDLDEIFITPSPVMFPDDFDSWNVQVFRSIDGGAAFGFPDSPEEAAKAGLISGKDNTIDRSIQDAYINAIRRAKNFIYIENQYFLGSSFEWRGSDVKPEMINALHLIPKELSLKIVSKIEARERFTVYVVVPMWPEGFPEGGTVQAILDWQRRTMEMMYKDIVLALRANGIEEDPRNYLTFFCVGNREVKKPGEYEPSESPEENSDYLRAQKARRFMIYVHAKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGAYQPFHLSNREPARGQVHGFRLALWYEHLGLLHESFLFPESIECVRRVNQLAEKYWDLYSSDTFEHDLPGHLLRYPIGVSGDGEITELPGFEFFPDTKARVLGNKSNYLPPILTT 807
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 85111037 85114681 - Tan0009831.1 Tan04g2586 750990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g2586 807 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 325 363 IPR001736 GO:0003824(InterPro)
Tan04g2586 807 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 149 IPR035892 -
Tan04g2586 807 FunFam Phospholipase D delta 200 443 - -
Tan04g2586 807 Pfam Phospholipase D Active site motif 655 680 IPR001736 GO:0003824(InterPro)
Tan04g2586 807 Pfam Phospholipase D Active site motif 326 363 IPR001736 GO:0003824(InterPro)
Tan04g2586 807 Gene3D C2 domain 5 156 IPR035892 -
Tan04g2586 807 Gene3D Endonuclease Chain A 200 437 - -
Tan04g2586 807 SUPERFAMILY Phospholipase D/nuclease 150 435 - -
Tan04g2586 807 PIRSF PLD_plant 1 807 IPR011402 GO:0004630(InterPro)|GO:0005509(InterPro)|GO:0016020(InterPro)|GO:0046470(InterPro)
Tan04g2586 807 SMART C2_3c 9 123 IPR000008 -
Tan04g2586 807 SUPERFAMILY Phospholipase D/nuclease 499 737 - -
Tan04g2586 807 PANTHER PHOSPHOLIPASE D 7 794 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Tan04g2586 807 Pfam C2 domain 10 125 IPR000008 -
Tan04g2586 807 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 653 680 IPR001736 GO:0003824(InterPro)
Tan04g2586 807 Gene3D Endonuclease Chain A 475 696 - -
Tan04g2586 807 ProSiteProfiles C2 domain profile. 1 124 IPR000008 -
Tan04g2586 807 SMART pld_4 325 363 IPR001736 GO:0003824(InterPro)
Tan04g2586 807 SMART pld_4 653 680 IPR001736 GO:0003824(InterPro)
Tan04g2586 807 FunFam Phospholipase D 466 699 - -
Tan04g2586 807 Pfam Phospholipase D C terminal 726 797 IPR024632 -
Tan04g2586 807 CDD C2_plant_PLD 2 147 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2586 Tan-Chr4:85111037 Tan06g0406 Tan-Chr6:3041041 0.00E+00 dispersed
Tan03g2130 Tan-Chr3:76070034 Tan04g2586 Tan-Chr4:85111037 1.50E-195 transposed
Tan02g2720 Tan-Chr2:95496371 Tan04g2586 Tan-Chr4:85111037 0.00E+00 wgd
Tan04g2586 Tan-Chr4:85111037 Tan06g0405 Tan-Chr6:3041041 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g2586 K01115 - csv:101215246 1570.44