Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g2613 ATGGAGAATCTCAGGGCTCCATTTAGGGGTATTCTGGATGATATCAGAGGAAGAACAGCCTGTTATAAGCAAGATTGGATTGATGGTCGACTTTCAGGAATCGGAATTTTGGCCCCAACTGCCTATATTTTTTTCGCGTCTGCACTTCCTGTCATTGCTTTCGGGGAGCAACTGAGCCGCGATACAGATGGAAGCTTGAGCACAGTAGAGACTTTGGCTTCCACAGCCATTTGTGGCATCCTTCATTCAATTCTTGGTGGGCAACCTCTCCTAGTTGTAGGGGTTGCAGAACCTACAATTATTATGTATACCTATTTGTACAATTTTTGCAAAGAAAGGAAAGATATAGGGAGAGACCTCTTCTTGGCTTGGGCAGGATGGGTTTGTGTCTGGACAGCCCTCTTGCTGTTCCTGCTTGCCATATTCAATGCTTCCAGCCTAATCAACCGATTTACAAGGATTGCAGGGGAACTTTTTGGCATGTTAATCTCTGTTTTGTTCATTCAAGAAGCTATTAAGGGAGTGGTGAGCGAATTTGAAGTTCCAAAGGCTGAGGATTCAAGTTTAGAGAAGTTCCAATTTCATTGGCTTTACACCAATGGATTACTGGGAATTGTATTTACTTTTGGCCTTCTCTATACTGCTTTGAAGAGCAGAAAGGCAAGATCATGGTTGTATGGCACAGGCTGGCTGAGGAGTTTCATTGCAGACTATGGAGTTCCTCTGATGGTTCTAGTATGGACTGCACTATCATTTAGTGTACCAAGCAAAGTCCCCTTTGGAGTTCCAAGAAGACTTCAAAGTCCTCTCGCATGGCAATCTACTTCTCTGCACCATTGGACTGTCATCAAGGACATGGGGAAGATACCTCCTGCATACATCTTTGCGGCCTTTATTCCTGCTGTGATGATTGCAGGACTTTATTTTTTTGATCACAGTGTTGCTTCTCAGATGGCACAGCAAAAGGAGTTTAATCTCAAGAATCCTTCTGCTTACCACTACGACATCCTGTTGCTGGGATTTATGACGTTGCTTTGTGGGTTAATCGGGCTTCCTCCTTCGAACGGGGTTTTGCCACAGTCCCCCATGCACACCAAGTGTCTTGCAACTCTCAGGAGGCGTTTGATGCGAAGAAAGATGGTAGAAAGTGCAAAGGAAAGCATAAAAAAGAAAGCTACTGATTCTGAAATCTATGGCCAAATGCAAGCTGTGTTCTTAGAAATGGAGAGCAGCCCAATTACGACGTCAGTAGTCAAAGAGCTCGAAGATTTGAAGGAGGCAGTCATGAAAGGTGAAAATAAGGATAAACATGCCAAGGATACATTTGATCCAGAGAAGCATATTGATGCTCATCTTCCTGTTCGAGTAAACGAGCAAAGATTGAGCAATCTGCTGCAATCGCTTCTGGTGGCAGCATCGGTATTTGCTTTACCAGCAATAAAGAAGATACCAACATCAGTTCTTTGGGGATATTTTGCCTACATGGCCATTGACAGTCTACCTGGAAACCAATTCTGGGAAAGGATTTTACTTCTCTTCGTAATGCCTAGTCGACGTTACAAGGTCTTAGAAGGCTTTCATGCTTCCTTTGTGGAGTCTGTGCCATTCAAATACATAGCCGCATTCACTCTATTTCAATTTGTCTATTTCCTCATTTGCTTTGGAGTGACATGGATCCCCATAGCTGGTGTCTTGTTTCCTTTGCCTTTCTTCCTTCTCATTGGCATAAGACATCGCATCCTTCCCAAGCTACTCCAGCCTCGTTATTTGCAGGAGCTCGACGCAGCTGAGTACGAAGAACTAACCGGTACCCCGATTCTCTCGCTTAGCCTTTCTATCAAGGAAAAGGCTACCACTCAAATAGTTAATAGTGAAGATGAAGTTGAAATATGTGATGCTGAAATACTAGATCAGTTGACGACCCATAGAGGAGAGCTGAAGGTTAGAACTATAAGCTTCAGCGAGGAGAGACACGGTCAGGTCTATCCTGATCAAGGCATTGGGAAATACTAA 2013 43.82 MENLRAPFRGILDDIRGRTACYKQDWIDGRLSGIGILAPTAYIFFASALPVIAFGEQLSRDTDGSLSTVETLASTAICGILHSILGGQPLLVVGVAEPTIIMYTYLYNFCKERKDIGRDLFLAWAGWVCVWTALLLFLLAIFNASSLINRFTRIAGELFGMLISVLFIQEAIKGVVSEFEVPKAEDSSLEKFQFHWLYTNGLLGIVFTFGLLYTALKSRKARSWLYGTGWLRSFIADYGVPLMVLVWTALSFSVPSKVPFGVPRRLQSPLAWQSTSLHHWTVIKDMGKIPPAYIFAAFIPAVMIAGLYFFDHSVASQMAQQKEFNLKNPSAYHYDILLLGFMTLLCGLIGLPPSNGVLPQSPMHTKCLATLRRRLMRRKMVESAKESIKKKATDSEIYGQMQAVFLEMESSPITTSVVKELEDLKEAVMKGENKDKHAKDTFDPEKHIDAHLPVRVNEQRLSNLLQSLLVAASVFALPAIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVMPSRRYKVLEGFHASFVESVPFKYIAAFTLFQFVYFLICFGVTWIPIAGVLFPLPFFLLIGIRHRILPKLLQPRYLQELDAAEYEELTGTPILSLSLSIKEKATTQIVNSEDEVEICDAEILDQLTTHRGELKVRTISFSEERHGQVYPDQGIGKY 670
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 85326527 85332331 - Tan0010420.1 Tan04g2613 751017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g2613 670 PANTHER ANION EXCHANGE PROTEIN 4 642 IPR003020 GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER)
Tan04g2613 670 Gene3D Helical hairpin bin 18 60 - -
Tan04g2613 670 Pfam HCO3- transporter integral membrane domain 7 181 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Tan04g2613 670 Pfam HCO3- transporter integral membrane domain 201 373 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Tan04g2613 670 Pfam HCO3- transporter integral membrane domain 454 596 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2697 Tan-Chr2:95260551 Tan04g2613 Tan-Chr4:85326527 2.50E-278 dispersed
Tan04g2613 Tan-Chr4:85326527 Tan05g2004 Tan-Chr5:69974347 2.30E-220 dispersed
Tan04g2613 Tan-Chr4:85326527 Tan04g2614 Tan-Chr4:85326527 3.00E-300 tandem
Tan04g2336 Tan-Chr4:81729512 Tan04g2613 Tan-Chr4:85326527 4.90E-224 transposed
Tan02g2696 Tan-Chr2:95260551 Tan04g2613 Tan-Chr4:85326527 5.80E-280 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g2613 K24194 - csv:101210964 1201.42