Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g2614 ATGGAGAATCTCAGGGCTCCATTTAGGGGTATTCTGGATGATATCAGAGGAAGAACAGCCTGTTATAAGCAAGATTGGATTGATGGTCGACTTTCAGGAATCGGAATTTTGGCCCCAACTGCCTATATTTTTTTCGCGTCTGCACTTCCTGTCATTGCTTTCGGGGAGCAACTGAGCCGCGATACAGATGGAAGCTTGAGCACAGTAGAGACTTTGGCTTCCACAGCCATTTGTGGCATCCTTCATTCAATTCTTGGTGGGCAACCTCTCCTAGTTGTAGGGGTTGCAGAACCTACAATTATTATGTATACCTATTTGTACAATTTTTGCAAAGAAAGGAAAGATATAGGGAGAGACCTCTTCTTGGCTTGGGCAGGATGGGTTTGTGTCTGGACAGCCCTCTTGCTGTTCCTGCTTGCCATATTCAATGCTTCCAGCCTAATCAACCGATTTACAAGGATTGCAGGGGAACTTTTTGGCATGTTAATCTCTGTTTTGTTCATTCAAGAAGCTATTAAGGGAGTGGTGAGCGAATTTGAAGTTCCAAAGGCTGAGGATTCAAGTTTAGAGAAGTTCCAATTTCATTGGCTTTACACCAATGGATTACTGGGAATTGTATTTACTTTTGGCCTTCTCTATACTGCTTTGAAGAGCAGAAAGGCAAGATCATGGTTGTATGGCACAGGCTGGCTGAGGAGTTTCATTGCAGACTATGGAGTTCCTCTGATGGTTCTAGTATGGACTGCACTATCATTTAGTGTACCAAGCAAAGTCCCCTTTGGAGTTCCAAGAAGACTTCAAAGTCCTCTCGCATGGCAATCTACTTCTCTGCACCATTGGACTGTCATCAAGGACATGGGGAAGATACCTCCTGCATACATCTTTGCGGCCTTTATTCCTGCTGTGATGATTGCAGGACTTTATTTTTTTGATCACAGTGTTGCTTCTCAGATGGCACAGCAAAAGGAGTTTAATCTCAAGAATCCTTCTGCTTACCACTACGACATCCTGTTGCTGGGATTTATGACGTTGCTTTGTGGGTTAATCGGGCTTCCTCCTTCGAACGGGGTTTTGCCACAGTCCCCCATGCACACCAAGTGTCTTGCAACTCTCAGGAGGCGTTTGATGCGAAGAAAGATGGTAGAAAGTGCAAAGGAAAGCATAAAAAAGAAAGCTACTGATTCTGAAATCTATGGCCAAATGCAAGCTGTGTTCTTAGAAATGGAGAGCAGCCCAATTACGACGTCAGTAGTCAAAGAGCTCGAAGATTTGAAGGAGGCAGTCATGAAAGGTGAAAATAAGGATAAACATGCCAAGGATACATTTGATCCAGAGAAGCATATTGATGCTCATCTTCCTGTTCGAGTAAACGAGCAAAGATTGAGCAATCTGCTGCAATCGCTTCTGGTGGCAGCATCGGTATTTGCTTTACCAGCAATAAAGAAGATACCAACATCAGTTCTTTGGGGATATTTTGCCTACATGGCCATTGACAGTCTACCTGGAAACCAATTCTGGGAAAGGATTTTACTTCTCTTCGTAATGCCTAGTCGACGTTACAAGTAA 1566 43.68 MENLRAPFRGILDDIRGRTACYKQDWIDGRLSGIGILAPTAYIFFASALPVIAFGEQLSRDTDGSLSTVETLASTAICGILHSILGGQPLLVVGVAEPTIIMYTYLYNFCKERKDIGRDLFLAWAGWVCVWTALLLFLLAIFNASSLINRFTRIAGELFGMLISVLFIQEAIKGVVSEFEVPKAEDSSLEKFQFHWLYTNGLLGIVFTFGLLYTALKSRKARSWLYGTGWLRSFIADYGVPLMVLVWTALSFSVPSKVPFGVPRRLQSPLAWQSTSLHHWTVIKDMGKIPPAYIFAAFIPAVMIAGLYFFDHSVASQMAQQKEFNLKNPSAYHYDILLLGFMTLLCGLIGLPPSNGVLPQSPMHTKCLATLRRRLMRRKMVESAKESIKKKATDSEIYGQMQAVFLEMESSPITTSVVKELEDLKEAVMKGENKDKHAKDTFDPEKHIDAHLPVRVNEQRLSNLLQSLLVAASVFALPAIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVMPSRRYK 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 85326527 85332331 - Tan0010420.2 Tan04g2614 751018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g2614 521 Gene3D Helical hairpin bin 18 60 - -
Tan04g2614 521 PANTHER ANION EXCHANGE PROTEIN 4 517 IPR003020 GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER)
Tan04g2614 521 Pfam HCO3- transporter integral membrane domain 201 373 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Tan04g2614 521 Pfam HCO3- transporter integral membrane domain 454 517 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Tan04g2614 521 Pfam HCO3- transporter integral membrane domain 7 181 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2696 Tan-Chr2:95260551 Tan04g2614 Tan-Chr4:85326527 3.90E-228 dispersed
Tan04g2614 Tan-Chr4:85326527 Tan05g2004 Tan-Chr5:69974347 3.40E-190 dispersed
Tan04g2613 Tan-Chr4:85326527 Tan04g2614 Tan-Chr4:85326527 3.00E-300 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g2614 K24194 - csv:101210964 959.903