Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g2657 ATGGATTTCTGGCCGGAATTTCTCGCCAGCAGCTGGGGAAAAGAGTTCGTCGCCGGTGGAATCGGTGGCGTCGCCGGCGTCGTCTCCGGCTACCCACTTGACACCCTTCGCATTCGTCAACAACACTCCACATCCGGCTCCGCCCTCAGCGTCCTCCGTAACATCATGTCCAACGGCGGCCCCGCCGCCCTCTACCGAGGAATGGGCGCGCCACTCGCCTCCGTCACTTTCCAGAACGCCATTGTTTTCCAGACGAACGCCGTGCTCTGCAGGGCGTTCGATCCGGCGGCGAGTGAAACCCGTCCTCCGTCGTACAAGGCGGTGGCATTAGGCGGATTTGGCACCGGAGCGTTACAGAGCCTAATTTTAACTCCGGTGGAGCTTGTGAAAATCCGTCTCCAATTACAGGATTTGGGAAATTCAAGCCATTCAGATCTGGGTTCGTCTCGGCAAGGGCCGATGCAGGTTGCGAAGAACATTTTCAAAACCGAAGGCTACAGAGGTTTATACAGAGGATTAACAATCACGATGCTCAGAGACGCTCCTTCCCACTGTTTTTACTTTTGGACTTACGAATTCATGAGAGAAAAGCTTCATCCCGGCTGCAGAAACTCCGGCCAAGAGACCTTGAGAACGATGCTCGTCGCCGGCGGACTCGCCGGCGTCGCCAGTTGGGTTTGCTGTTACCCACTCGACGTCATGAAAACCAGACTTCAAGCTCAGTCCAAATTCTCGTTTCAGAAGTACAGTGGAATTATGGATTGTTTCTACAAGAGCGTCAAGGAAGAAGGGTACAGTGTTTTGTGGCGTGGATTGGGAACCGCCATTGCCAGAGCTTTTGTGGTGAATGGCGCCATTTTCTCTGCTTATGAACTCAGTTTGAGATGTCTGTTCAGTAATGGCGGATTTCATGCTGAAAATACGATTTGA 930 53.01 MDFWPEFLASSWGKEFVAGGIGGVAGVVSGYPLDTLRIRQQHSTSGSALSVLRNIMSNGGPAALYRGMGAPLASVTFQNAIVFQTNAVLCRAFDPAASETRPPSYKAVALGGFGTGALQSLILTPVELVKIRLQLQDLGNSSHSDLGSSRQGPMQVAKNIFKTEGYRGLYRGLTITMLRDAPSHCFYFWTYEFMREKLHPGCRNSGQETLRTMLVAGGLAGVASWVCCYPLDVMKTRLQAQSKFSFQKYSGIMDCFYKSVKEEGYSVLWRGLGTAIARAFVVNGAIFSAYELSLRCLFSNGGFHAENTI 309
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 85947083 85949059 + Tan0001829.1 Tan04g2657 751061
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan04g2657 309 Pfam Mitochondrial carrier protein 211 298 IPR018108 -
Tan04g2657 309 Pfam Mitochondrial carrier protein 109 198 IPR018108 -
Tan04g2657 309 Pfam Mitochondrial carrier protein 11 87 IPR018108 -
Tan04g2657 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 296 IPR018108 -
Tan04g2657 309 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 8 297 IPR050567 GO:0006810(PANTHER)|GO:0022857(PANTHER)
Tan04g2657 309 SUPERFAMILY Mitochondrial carrier 11 291 IPR023395 -
Tan04g2657 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 197 IPR018108 -
Tan04g2657 309 Gene3D Mitochondrial carrier domain 9 301 IPR023395 -
Tan04g2657 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 92 IPR018108 -
Tan04g2657 309 PRINTS Mitochondrial carrier protein signature 170 188 IPR002067 GO:0055085(InterPro)
Tan04g2657 309 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085(InterPro)
Tan04g2657 309 PRINTS Mitochondrial carrier protein signature 217 239 IPR002067 GO:0055085(InterPro)
Tan04g2657 309 PRINTS Mitochondrial carrier protein signature 118 136 IPR002067 GO:0055085(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2657 Tan-Chr4:85947083 Tan06g0306 Tan-Chr6:2379756 1.20E-129 dispersed
Tan03g0759 Tan-Chr3:63552943 Tan04g2657 Tan-Chr4:85947083 1.20E-09 transposed
Tan08g2161 Tan-Chr8:73440873 Tan04g2657 Tan-Chr4:85947083 2.10E-25 transposed
Tan04g2657 Tan-Chr4:85947083 Tan06g0305 Tan-Chr6:2379756 1.20E-129 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g2657 K15109 - csv:101222749 585.104