Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan04g2657 | ATGGATTTCTGGCCGGAATTTCTCGCCAGCAGCTGGGGAAAAGAGTTCGTCGCCGGTGGAATCGGTGGCGTCGCCGGCGTCGTCTCCGGCTACCCACTTGACACCCTTCGCATTCGTCAACAACACTCCACATCCGGCTCCGCCCTCAGCGTCCTCCGTAACATCATGTCCAACGGCGGCCCCGCCGCCCTCTACCGAGGAATGGGCGCGCCACTCGCCTCCGTCACTTTCCAGAACGCCATTGTTTTCCAGACGAACGCCGTGCTCTGCAGGGCGTTCGATCCGGCGGCGAGTGAAACCCGTCCTCCGTCGTACAAGGCGGTGGCATTAGGCGGATTTGGCACCGGAGCGTTACAGAGCCTAATTTTAACTCCGGTGGAGCTTGTGAAAATCCGTCTCCAATTACAGGATTTGGGAAATTCAAGCCATTCAGATCTGGGTTCGTCTCGGCAAGGGCCGATGCAGGTTGCGAAGAACATTTTCAAAACCGAAGGCTACAGAGGTTTATACAGAGGATTAACAATCACGATGCTCAGAGACGCTCCTTCCCACTGTTTTTACTTTTGGACTTACGAATTCATGAGAGAAAAGCTTCATCCCGGCTGCAGAAACTCCGGCCAAGAGACCTTGAGAACGATGCTCGTCGCCGGCGGACTCGCCGGCGTCGCCAGTTGGGTTTGCTGTTACCCACTCGACGTCATGAAAACCAGACTTCAAGCTCAGTCCAAATTCTCGTTTCAGAAGTACAGTGGAATTATGGATTGTTTCTACAAGAGCGTCAAGGAAGAAGGGTACAGTGTTTTGTGGCGTGGATTGGGAACCGCCATTGCCAGAGCTTTTGTGGTGAATGGCGCCATTTTCTCTGCTTATGAACTCAGTTTGAGATGTCTGTTCAGTAATGGCGGATTTCATGCTGAAAATACGATTTGA | 930 | 53.01 | MDFWPEFLASSWGKEFVAGGIGGVAGVVSGYPLDTLRIRQQHSTSGSALSVLRNIMSNGGPAALYRGMGAPLASVTFQNAIVFQTNAVLCRAFDPAASETRPPSYKAVALGGFGTGALQSLILTPVELVKIRLQLQDLGNSSHSDLGSSRQGPMQVAKNIFKTEGYRGLYRGLTITMLRDAPSHCFYFWTYEFMREKLHPGCRNSGQETLRTMLVAGGLAGVASWVCCYPLDVMKTRLQAQSKFSFQKYSGIMDCFYKSVKEEGYSVLWRGLGTAIARAFVVNGAIFSAYELSLRCLFSNGGFHAENTI | 309 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 85947083 | 85949059 | + | Tan0001829.1 | Tan04g2657 | 751061 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan04g2657 | 309 | Pfam | Mitochondrial carrier protein | 211 | 298 | IPR018108 | - | |
Tan04g2657 | 309 | Pfam | Mitochondrial carrier protein | 109 | 198 | IPR018108 | - | |
Tan04g2657 | 309 | Pfam | Mitochondrial carrier protein | 11 | 87 | IPR018108 | - | |
Tan04g2657 | 309 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 208 | 296 | IPR018108 | - | |
Tan04g2657 | 309 | PANTHER | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED | 8 | 297 | IPR050567 | GO:0006810(PANTHER)|GO:0022857(PANTHER) | |
Tan04g2657 | 309 | SUPERFAMILY | Mitochondrial carrier | 11 | 291 | IPR023395 | - | |
Tan04g2657 | 309 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 103 | 197 | IPR018108 | - | |
Tan04g2657 | 309 | Gene3D | Mitochondrial carrier domain | 9 | 301 | IPR023395 | - | |
Tan04g2657 | 309 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 10 | 92 | IPR018108 | - | |
Tan04g2657 | 309 | PRINTS | Mitochondrial carrier protein signature | 170 | 188 | IPR002067 | GO:0055085(InterPro) | |
Tan04g2657 | 309 | PRINTS | Mitochondrial carrier protein signature | 15 | 28 | IPR002067 | GO:0055085(InterPro) | |
Tan04g2657 | 309 | PRINTS | Mitochondrial carrier protein signature | 217 | 239 | IPR002067 | GO:0055085(InterPro) | |
Tan04g2657 | 309 | PRINTS | Mitochondrial carrier protein signature | 118 | 136 | IPR002067 | GO:0055085(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan04g2657 | Tan-Chr4:85947083 | Tan06g0306 | Tan-Chr6:2379756 | 1.20E-129 | dispersed | |
Tan03g0759 | Tan-Chr3:63552943 | Tan04g2657 | Tan-Chr4:85947083 | 1.20E-09 | transposed | |
Tan08g2161 | Tan-Chr8:73440873 | Tan04g2657 | Tan-Chr4:85947083 | 2.10E-25 | transposed | |
Tan04g2657 | Tan-Chr4:85947083 | Tan06g0305 | Tan-Chr6:2379756 | 1.20E-129 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan04g2657 | K15109 | - | csv:101222749 | 585.104 |