Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan04g2695 | ATGGGTTGTGTTCTTGGCAAGTGTTGCACTTCTAATCACTACCGGCCGCCTTCTGACAGCGATATGGCCCAATTCTATGATGCTCCGCCGTGTGGTTTACAAGGAAAACATATACTAACGAGAATGTCATTAGAGTTTGTTCGTGTGCCTTCTCACAACTTCTATATGGAGTACTCGCTCTTAGCCCAACGTGGCTACTACCCTGATTCCCCTGGTAAAGAAAACCAAGATAGCTTCTGTGTTAGTACGCAAATTCGAAGTAACATGAACATCCATTTCTTTGGTGTTTTTGATGGGCATGGCCAATATGGGTTGGAGTGTTCGAATTTCGTTAAGGAGAGAGTTGTGCAAATATTATGTAATGATCCGACATTGTTGGATGACCCTGTTAAAGCTTATAATTCAGCATTCTTGACCACGAATGAAGAATTGCATAATAGCGAGATCGATGATTCCATGAGTGGCACAACAGCTATTACTGTTCTCGTTGTTGGGAATACGCTTTACGTTGCGAATGTGGGTGATTCGAGGGCAGTCATAGCTGTTAAAGATGGGAATCGAATTGTTGCTAAGGACATGTCCTGTGATCAAACACCATTTAGGAAGGATGAGTGCGAAAGAGTAAAGCTCGCTGGGGCTAGGGTATTGACAATTGATCAAATTGAAGGACTTAAGGATCCGAATATTCAAATATGGGGTGATGAGGAGAGCGAGGGAAATGATCCACCTCGATTATGGTTACCTAATAGCTTGTATCCTGGTACTGCATTTACACGGAGTGTAGGAGATAGTACCGCCGAGAAGATTGGTGTCACAGCTGTCCCTGAGGTTTCAGTAGTTCAGTTGACTCAAAACCATCTTTTCTTTGTTGTTGCAAGCGATGGAGTGTTCGAGTTCCTTACAAGTCAAGCAGTTATTGATATGGCTGCAAGGTACACCGATCCACGAGATGCGTGCTCTGCTATTGCTGGAGAGTCATACAAGCTATGGTTGGAGCATGAAAATCGGACAGATGATATCACAATCATCATTGTTCATGTTAAAGGCCTCTCTAATGTATAA | 1062 | 43.13 | MGCVLGKCCTSNHYRPPSDSDMAQFYDAPPCGLQGKHILTRMSLEFVRVPSHNFYMEYSLLAQRGYYPDSPGKENQDSFCVSTQIRSNMNIHFFGVFDGHGQYGLECSNFVKERVVQILCNDPTLLDDPVKAYNSAFLTTNEELHNSEIDDSMSGTTAITVLVVGNTLYVANVGDSRAVIAVKDGNRIVAKDMSCDQTPFRKDECERVKLAGARVLTIDQIEGLKDPNIQIWGDEESEGNDPPRLWLPNSLYPGTAFTRSVGDSTAEKIGVTAVPEVSVVQLTQNHLFFVVASDGVFEFLTSQAVIDMAARYTDPRDACSAIAGESYKLWLEHENRTDDITIIIVHVKGLSNV | 353 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 86458863 | 86460303 | + | Tan0019116.1 | Tan04g2695 | 751099 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan04g2695 | 353 | Gene3D | - | 57 | 348 | IPR036457 | - | |
Tan04g2695 | 353 | SMART | PP2C_4 | 53 | 345 | IPR001932 | - | |
Tan04g2695 | 353 | PANTHER | PROTEIN PHOSPHATASE | 58 | 345 | IPR015655 | GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Tan04g2695 | 353 | ProSiteProfiles | PPM-type phosphatase domain profile. | 57 | 347 | IPR001932 | - | |
Tan04g2695 | 353 | Pfam | Protein phosphatase 2C | 82 | 322 | IPR001932 | - | |
Tan04g2695 | 353 | ProSitePatterns | PPM-type phosphatase domain signature. | 93 | 101 | IPR000222 | GO:0043169(InterPro) | |
Tan04g2695 | 353 | CDD | PP2Cc | 73 | 347 | IPR001932 | - | |
Tan04g2695 | 353 | FunFam | Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein | 52 | 349 | - | - | |
Tan04g2695 | 353 | SUPERFAMILY | PP2C-like | 40 | 349 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan04g2695 | Tan-Chr4:86458863 | Tan06g2592 | Tan-Chr6:78582916 | 1.70E-153 | dispersed | |
Tan04g2695 | Tan-Chr4:86458863 | Tan04g2696 | Tan-Chr4:86473947 | 9.00E-187 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan04g2695 | - | - | - | 0.0 |