Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g2696 ATGGGTTGTGTCCTTGGCAAGTGTTGCACTTCCAGTCGCTACCCGCCATCTTGTGAAGGTGATATGGCCCAATTTTGTGATGCACCTCTGTGTGGAGGGAAACATATACTAACGGGAAGGTCATTGGAATATGTTCATGTGCCTTCTCACAACTTCCATATGGAGTACACGCTTTTGACCCAACGCGGCTATTACCCTGATTCCCCTGATAAAGAAAACCAAGATAGCTTCTGTGTTAGTACGCAAATTCAAGGTAACCTGAATATCCATTTATTTGGTGTTTTTGATGGCCACGGTCAATACGGATCGCAGTGTTCGAATTTCGTTAAGGAGAGGGTTGCACAAATACTATGTAACGATCCAACATTGTTGGAAGATCCTGTTAAAGCTTATAATTCGGCATTTTTTACCACGAATGAAGAATTGCATAATAGTGAGATTGATGATTCCATGAGTGGCACAACAGCTATTACCGTTCTTGTTATTGGGAATATGCTTTACGTTGCGAATGTGGGTGATTCGAGAGCAGTCATAGCTGTTAAAGATGGGGATCAAATTGTTGCTAAGGACATGTCCTGTGATCAAACACCATTTAGAAAGGATGAGTGCGAGAGAGTAAAGCTCGCCGGGGCTAGGGTGTTGACAATTGATCAAATTGAAGGGCTTAAGGATCCAAATATTCAAATATGGGGTGATGAGGAGAGCGAGGGAAATGATCCACCTCGATTGTGGTTTCCTAATAGCTTGTATCCTGGTACTGCATTTACACGGAGTGTAGGAGATAGGACCGCCGAGAAGATTGGTGTCACTGCTGTCCCTGAGATTTCAGTTGTTCAGTTGACTCAAAACCATCTTTTCTTTGTTGTCGCAAGCGATGGAGTGTTCGAATTCCTTTCAAGTCAAGCAGTTGTTGATATGGCTGCAAGGTACACCGATCCACGAGATGCATGCTCTGCTATTGCTGGAGAGTCATACAAGTTGTGGTTGGAGCATGAAAACCGGACAGATGATATAACAATCATCATCGTTCACATCAAAGGCCTCTCTAATTCAGGGGCTGCTGAAATCGCTGGGCTGAACGGGGTCCGCTTAAGGCATACAAGTTCTGAGCGGGGAGCCTCTGAGATGTCGGCCTTCACTGGAAACTCGGAGGCCTTTCGCTCCATCAGAAGTGATTTCTCAGATCTGCAACTCTCCCAGCATGTCGGTTTGATGTACAGGAGCACAGCAATTGTCGTTCCATCTCCCACGCAACACCAACCATTGGAAGTGTGTATTTCTTGGAAACTTCATATTATATATCATTGTGTCTGCTCTCTTACTGTCAATGTTGCTAGTAACAACCCTTCTAACCTCAAGAGGAAGAACATAATGTTGTCCCTCTATCATAGAGGGCCATATGAGAAATCAATGATGTTTTCCATTGAAAGGAATTCGGAGAGAAGGAAATTGAAATGA 1458 44.03 MGCVLGKCCTSSRYPPSCEGDMAQFCDAPLCGGKHILTGRSLEYVHVPSHNFHMEYTLLTQRGYYPDSPDKENQDSFCVSTQIQGNLNIHLFGVFDGHGQYGSQCSNFVKERVAQILCNDPTLLEDPVKAYNSAFFTTNEELHNSEIDDSMSGTTAITVLVIGNMLYVANVGDSRAVIAVKDGDQIVAKDMSCDQTPFRKDECERVKLAGARVLTIDQIEGLKDPNIQIWGDEESEGNDPPRLWFPNSLYPGTAFTRSVGDRTAEKIGVTAVPEISVVQLTQNHLFFVVASDGVFEFLSSQAVVDMAARYTDPRDACSAIAGESYKLWLEHENRTDDITIIIVHIKGLSNSGAAEIAGLNGVRLRHTSSERGASEMSAFTGNSEAFRSIRSDFSDLQLSQHVGLMYRSTAIVVPSPTQHQPLEVCISWKLHIIYHCVCSLTVNVASNNPSNLKRKNIMLSLYHRGPYEKSMMFSIERNSERRKLK 485
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 86473947 86476965 + Tan0017203.1 Tan04g2696 751100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g2696 485 SUPERFAMILY PP2C-like 42 347 IPR036457 -
Tan04g2696 485 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169(InterPro)
Tan04g2696 485 PANTHER PROTEIN PHOSPHATASE 56 344 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Tan04g2696 485 SMART PP2C_4 51 343 IPR001932 -
Tan04g2696 485 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 50 347 - -
Tan04g2696 485 Pfam Protein phosphatase 2C 76 320 IPR001932 -
Tan04g2696 485 Gene3D - 47 347 IPR036457 -
Tan04g2696 485 CDD PP2Cc 71 345 IPR001932 -
Tan04g2696 485 ProSiteProfiles PPM-type phosphatase domain profile. 55 345 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2696 Tan-Chr4:86473947 Tan06g2592 Tan-Chr6:78582916 8.90E-153 dispersed
Tan04g2695 Tan-Chr4:86458863 Tan04g2696 Tan-Chr4:86473947 9.00E-187 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g2696 - - - 0.0