Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g2716 ATGGCAACTCTCCAAATCTTCATCCTGATTCTTCTTTCCACTTTTGCTCTCTACAATTTCGTCTCTGCACAGAATCCTTCAGGTTTCATCAGTTTAGACTGCGGAATTCCGGCGAACTCCACATACACAGAGCCGGTCACCGGAATAATCTACGAATCCGATGCGGCGTTTATAAATTCCGGCGAAGTCCACAACGTTTCCGCCGATATCATACAGAACGGCTTGGAACGGCCTCTGTGGAGTGTGAGGAGCTTTCCAGAAGGAATTAGGAATTGCTACACATTGAAAGTGAGGACAGGGACGAAGTATTTGATTCGAGCGATTTTTAGGTATGGAAATTACGATGGACGAAGGAATTTGCCTGGATTTGATCTGTATTTCGGAGCGAATTTTTGGGATTCGGTAGCGTTTGATAGAGATCTTACTGTGCGTAAAGAGATTGTGCATATTGTTTCGTCGAGCAATGTACAAATTTGTGCTCTGAATGTTGGAACTGGAATTCCGTTCATTTCTGCTCTGGAATTGAGGCCTCTGATTAACTCTGTTTACGAGACGGGATCTTTGACGTTGGCTAACTTCGTACGGCTCGATTATGGCTCCCTTGATAATCAAACTATCAGGTATAAAAACGACGTCTACGATCGAATCTGGGATGCAGGTGTTCCAGCCCAAGGATGGACAACCATAAACACCTCGGAGCAAGTGAACGTCAACGACCGGCTCTTCTTCCAGCCGCCTCAGGCGGTCATGAACACGGCGGCGACGGAGAGAAACGCAAGCGCTCCGATGGAGCTCACTTGGCGCCCGCCGAATTCCACGACGGCGTTTTTCCTCTACCTGCATTTTGCAGAGCTGAAGCTGCTTCAACGGAATGAGTCCAGAAAGTTCGACATATTTGTGAATGGAGAACGGTGGCTTAATGAAACGTTTTCTCCCGTCCATTTAGGCCTGTCGACCATTTTCAGTACCTCACCTCTGACTGGCGAAACCCACCTTATCTCCCTCGTCAGAGCTGCCAATTCAACCCTTCCTCCCATCCTCAATGCTCTTGAGGTTTATCGAGTCGTTGATTTCTCGCAATCCGAGACCAATGGAGAAGATGTTGTTGCCATTGAAAATATCAAGACAATTTATGGAGTTGGAAGAAACTGGCAAGGAGATCCTTGTGCCCCAAGGGAATTAATTTGGCAAGGAGTCAACTGTAGCTTTGTGAACTCTGAGCCTCCCAGAATCACATCCTTGGATTTGTCCTCCAGTGGACTGAGAGGGGAAATACCTCGAGAGATAGCAAATCTTAATATGCTGGAGACTCTAGATCTATCAAACAATAATTTGAGCGGATCAGTGCCTGAATTTCTCACTCAATTGCCACTGTTGCGAGTCCTAAACTTGGAAAAAAACGAGCTTTCAGGACTAATTCCAGCTCAGCTTGTAGAAAAATCCAATAATGGCTCTATGTTATTAAGATTTGGCGAAAATCCTAATCTGTTTACTACACCTCCAAGCAAAAAGAAGGGAAGCAATGTTGTTGTTCCTGTAGTAGCATCAGTTGTTGGATTTCTTCTGCTTTTGTTTTTAATTGCTGCGGCTATATTTTGGAGGGCAAAGAGAAGAAAATCAAAAGGAGCTGTAATTGGAGTGGAGAAACAAATTGTTGGTCATTCTGAAAATTGGGACACGGCTAAGAGATGCTATTCATACTCAGATGTCCTAAGAATGACAAACAATTTTGAGCGTATGCTTGGAGAAGGTGGCTTTGGACGAGTTTACTACGGAAAAATCGAGAACAGTGAAGTTGCTGTGAAAATGCTATCTCCTCGATCAGTTCAAGGGTATCAACAATTTCAAGCAGAGGTTGACCTTCTTATGAGGGTTCATCATAGGAACTTGACTGGTCTTGTTGGGTATTGCAATGAACCAACCAACAAAGGACTTATCTACGAGTACATGGGCAGAGGAAACTTGGGATCTCTCATGTCAGATGGAAAGTCAGATTTGTTAAACTGGGAAGACAGACTTCATATAGCAGTGGATGCAGCTCAAGGATTGCAATACTTGCATTCTGGTATAAAGCCAGCTATTGTACATAGAGATGTAAAATCTTCCAACATCTTGTTGGATGACAACTTTCGAGCGAAAGTATCTGATTTTGGCTTGTCGAGAATTTTTCCTGTCGATGATGGCGCTACTCATGTGACAACAAATGTGGTTGGCACACCTGGTTACCTCGACCCTGAATACTACACGTCTTATCGATTAAATGAGAAAAGCGACGTCTATGGCTTCGGAATTGTTCTACTAGAAATCATAACTGGAAGACCAGTTTTGACAAAGACTTTAGAGAAGGTAACTCACATCTTTCAATGGGTTGACTCGATGCTTTCTCAAGGTGATATCAACTCCATTATCGATCCTAAATTGAAAGAAGATTTCGATGTGAATACCATTTGGAAAGCGGTCGAAATAGCGATGTCCTGTGCATCTCCGGCCTCTACAAATAGGCCAACCATGAGCCAAGTTGTGATAGATTTGAATGAATGTTTGAACATGGAGTTAGCTCACAATACCAACAATCACCAACCTGAATCAGTAGTTGAAGATCACATTTCTCTGTTTGGTCCAGAAGCAAGGTAG 2634 43.62 MATLQIFILILLSTFALYNFVSAQNPSGFISLDCGIPANSTYTEPVTGIIYESDAAFINSGEVHNVSADIIQNGLERPLWSVRSFPEGIRNCYTLKVRTGTKYLIRAIFRYGNYDGRRNLPGFDLYFGANFWDSVAFDRDLTVRKEIVHIVSSSNVQICALNVGTGIPFISALELRPLINSVYETGSLTLANFVRLDYGSLDNQTIRYKNDVYDRIWDAGVPAQGWTTINTSEQVNVNDRLFFQPPQAVMNTAATERNASAPMELTWRPPNSTTAFFLYLHFAELKLLQRNESRKFDIFVNGERWLNETFSPVHLGLSTIFSTSPLTGETHLISLVRAANSTLPPILNALEVYRVVDFSQSETNGEDVVAIENIKTIYGVGRNWQGDPCAPRELIWQGVNCSFVNSEPPRITSLDLSSSGLRGEIPREIANLNMLETLDLSNNNLSGSVPEFLTQLPLLRVLNLEKNELSGLIPAQLVEKSNNGSMLLRFGENPNLFTTPPSKKKGSNVVVPVVASVVGFLLLLFLIAAAIFWRAKRRKSKGAVIGVEKQIVGHSENWDTAKRCYSYSDVLRMTNNFERMLGEGGFGRVYYGKIENSEVAVKMLSPRSVQGYQQFQAEVDLLMRVHHRNLTGLVGYCNEPTNKGLIYEYMGRGNLGSLMSDGKSDLLNWEDRLHIAVDAAQGLQYLHSGIKPAIVHRDVKSSNILLDDNFRAKVSDFGLSRIFPVDDGATHVTTNVVGTPGYLDPEYYTSYRLNEKSDVYGFGIVLLEIITGRPVLTKTLEKVTHIFQWVDSMLSQGDINSIIDPKLKEDFDVNTIWKAVEIAMSCASPASTNRPTMSQVVIDLNECLNMELAHNTNNHQPESVVEDHISLFGPEAR 877
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 86662542 86668589 + Tan0014847.1 Tan04g2716 751120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g2716 877 ProSiteProfiles Protein kinase domain profile. 575 848 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g2716 877 SUPERFAMILY Protein kinase-like (PK-like) 560 844 IPR011009 -
Tan04g2716 877 ProSitePatterns Protein kinases ATP-binding region signature. 581 602 IPR017441 GO:0005524(InterPro)
Tan04g2716 877 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 650 857 - -
Tan04g2716 877 Gene3D Phosphorylase Kinase; domain 1 557 649 - -
Tan04g2716 877 Pfam Leucine rich repeat 409 469 IPR001611 GO:0005515(InterPro)
Tan04g2716 877 ProSiteProfiles Leucine-rich repeat profile. 434 456 IPR001611 GO:0005515(InterPro)
Tan04g2716 877 Gene3D Transferase(Phosphotransferase) domain 1 650 870 - -
Tan04g2716 877 PANTHER OS07G0107800 PROTEIN-RELATED 21 852 - -
Tan04g2716 877 FunFam Leucine-rich repeat receptor-like kinase 366 499 - -
Tan04g2716 877 CDD STKc_IRAK 581 846 - -
Tan04g2716 877 SMART serkin_6 575 848 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g2716 877 Pfam Protein tyrosine and serine/threonine kinase 577 842 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan04g2716 877 Pfam Malectin-like domain 32 355 IPR024788 -
Tan04g2716 877 Gene3D - 193 354 - -
Tan04g2716 877 FunFam Leucine-rich repeat receptor-like protein kinase 553 649 - -
Tan04g2716 877 Gene3D Ribonuclease Inhibitor 370 487 IPR032675 -
Tan04g2716 877 SUPERFAMILY L domain-like 372 478 - -
Tan04g2716 877 ProSitePatterns Serine/Threonine protein kinases active-site signature. 694 706 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2716 Tan-Chr4:86662542 Tan04g2718 Tan-Chr4:86662542 0.00E+00 dispersed
Tan04g2715 Tan-Chr4:86637612 Tan04g2716 Tan-Chr4:86662542 5.10E-191 tandem
Tan04g2716 Tan-Chr4:86662542 Tan04g2717 Tan-Chr4:86662542 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67510 PF12819 Malectin_like 7.10E-109 CL0202 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g2716 - - - 0.0