Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan04g2741 | ATGGAAAGCCCCGCCATCTTCTCAATTTTCGTCTTCCTCCTCTCACTCTGTTTTAGGCTTCGAGCTTTCTCAGCCATGGCGGCTGACGAGGCAGGTACAGTGAAGGTCGGGGTCGTTCTCGACTCCGATTCGTCGATTGGGAAAATGGGGTTGAGTTGTATGGAAATGGCTCTCTCGGATTTCTATGGATTTCATAGAAATTACAAGACCCGGTTGGCTCTGTTCGCGAAAAACTCCATGGGAGACGTTGTTGAAGCTACTGCTGCAGCTTTGGAGTTAATCAAGAAGGAAGAAGTGGAAGCCATTGTTGGGCCACAGAATTCAACTCAAGCAGCTTTCATGGCGGATCTTGGGAAAAAATCTCAGGTACCCATAATTTCATTCTCCGCTACAACTACAACTCAATCGCTGAGTTCTCATCGGAACCCTTACTTTTTCCGAGCGACCCAAATCGATTCATCGCAAGTCAAACCCATTGCCGCTATTTTTGAAGTCTTCGATTGGCGACTGGCGGTGCTCATTCACTCTGACGATGAATATGGCGAGGGGATTTTGCCGTCCATGAGAGATGCTCTTCGAGAAATTAACACTCGAGTCGCTTACGAGACTGCGATTCCTCAATCTGCCTCCGATGACAGAATCGCCAAAGAGCTTTACAAATTGATGACGATGCAAACGAGGGTTTTCGTTGTTCATATGTTGCCCGAGCTTGGTTCTCGCGTTTTCTCCATGGCTAAGGAGATTGGAATGATGGGGTCGGGTTATATTTGGATTATAACGGATGGGATGAGTAATTTTCTCTCTCGGATTGATGGTTCCGCCATGGAAGCCATGAGTGGAGCTTTGGCTGTAAGGACTTACATTCCCAGAACAGAAGAACTTGAAGATTTTCAGCTACGATGGAGGAAGAAATTTGGAAAGGAAATTTCTGAACTGAATATATTTGGTTTGCGAGCTTATGATGCTACTGTTGCTCTAGCCAAGGCTGTGGAGAGAGTTGGAACCACAGAGTTCATTGTCAAGAATCCAAATGTTTCTGGTAAATCCACAGATCTTGACAATCTTGGTGTCTCTCGAAACGGTCCAAGGTTGTCTGAGGCATTGTCTAAAACACATTTCAAAGGGCTTGCAGGAGACTTCAGACTGGTTGAAGGGCAATTGAAATCATCAACTTATGAGATTATAAACATCAATCATGAAAAGAATATTACAGTGGTTGGATTCTGGACACCAGAAAATGGACTGACACAAACCTTAGACTCCACAAAAATGAGCTCAAACACTTCTGTTGCTAATCTTAGCCATATCATATGGCCAGGGGATGATCCCAATTCTTTTGGTTTCCCAAAAGGTTGGGAGATTCCAACAAATGAAAAGAAGCTAAGAATTGGAATTCCAGTTAAATCTGGGGTCAGCAAGTTTGTTAGAGAGATAAGGGATCCTGCGACTAACAGGATAAAGACAACAGGGTACAGTATCGATATCTTCGAAGCTGTAATCGAAGCACTACCGTACGCTGTTTCGTATGAATACATTCGATTTGCAAACGATAAAGGAGAAATGGCTGGTAGTTATGAGGACATGGTCAAGCAAGTGTACTATGGGGTATATGATGCAGTTGTGGGAGACGTATCCATCAGAGAAAGCAGATCCCTACATGTAGACTTCACATTGCCATACTCTGAAGCTAGTGTGTCGATGGTTGTACTATTTCGAGATAACAACAAAAAAGCTTGGCTTTTCTTGAAGCCTTTAACATTGGACCTTTGGTTCACAACTGGTTTCTTTTTTGCCTTCATTGGACTGGTCATCTGGATTCTCGAGCACAGAATCAATGAAGATTTTAGAGGTCCTCCCTCGCACGAAATCGGGACAAGCTTCTGGTTTTCTTTCTCAACTATGGTGTATGCTCAAAGGGAGAAGGTGGAAAGCAACTTGGCTAGATTTGTGGTAATAGTATGGCTGTTTGTGGTGCTCATATTGACTCAAAGTTACACGGCCAGTCTCACATCACTACTAACGGTTCAGAAACTCGACCCAACTTTTACTGATATGAACCAACTGAAGGAGCAGAGGGTGAATGTTGGTTACCCAAATGGTTCTTTTGTTCACGAACTGCTGATAGCTCAAGGTTTTCATCCATCCAAGCTTGTAATTTATAACAATATGGCACATTGTGGGTCATTGTTCTTAAATGGGACCATAGCTGCTGCCTTTGATGAAATCCCTTATCTCAAGGTTCTTACAACAACATATTGCACCAACTGCACCATCGTCGGTCCCACGATGAAATCGAACGGCTTCGGCTATGTCTTTCCCAAGGGGTCTCAACTCGGGCGCGATGTTTCAAAGGGAATACTTGATATAATGGAGAGTGGAGTACTGCAAGAGATTGAAAACAAATGGTTTAAAGGCAACATCAGCAGCCCTGACCCCAATAGCTTGATTTCCACTACACTTGGGCTTGAAAGCTTTTGGGGGTTGTTTCTTGTTACAGGAGCTGTATCTTCATCTGCACTCATAGTAGCTCTGGCCAGATTTCTCCATGAACACAGACATGTCTTGAAGCTTTCCACTGTCTCAGTGTGGAAAAGGTTTCTTCTTCTTTTGAAAATTTTCGACGAGAAAGACCTGACTTCGCCGGCGTTGAGAAAGAATCGTCGAGACGAAAGCCCGGAAGTTAAAGATGTCAGGTTTGAATCTCATCCCAGCCATTCCTGTGATTCAAGCTACAGAAATGGAGAACTTTCACCTTGTAACTTTGATGATTTCCATGGTGATCTGAGTGCAACTCCTCAGCCATCACCAAGCAGGTAA | 2817 | 43.88 | MESPAIFSIFVFLLSLCFRLRAFSAMAADEAGTVKVGVVLDSDSSIGKMGLSCMEMALSDFYGFHRNYKTRLALFAKNSMGDVVEATAAALELIKKEEVEAIVGPQNSTQAAFMADLGKKSQVPIISFSATTTTQSLSSHRNPYFFRATQIDSSQVKPIAAIFEVFDWRLAVLIHSDDEYGEGILPSMRDALREINTRVAYETAIPQSASDDRIAKELYKLMTMQTRVFVVHMLPELGSRVFSMAKEIGMMGSGYIWIITDGMSNFLSRIDGSAMEAMSGALAVRTYIPRTEELEDFQLRWRKKFGKEISELNIFGLRAYDATVALAKAVERVGTTEFIVKNPNVSGKSTDLDNLGVSRNGPRLSEALSKTHFKGLAGDFRLVEGQLKSSTYEIININHEKNITVVGFWTPENGLTQTLDSTKMSSNTSVANLSHIIWPGDDPNSFGFPKGWEIPTNEKKLRIGIPVKSGVSKFVREIRDPATNRIKTTGYSIDIFEAVIEALPYAVSYEYIRFANDKGEMAGSYEDMVKQVYYGVYDAVVGDVSIRESRSLHVDFTLPYSEASVSMVVLFRDNNKKAWLFLKPLTLDLWFTTGFFFAFIGLVIWILEHRINEDFRGPPSHEIGTSFWFSFSTMVYAQREKVESNLARFVVIVWLFVVLILTQSYTASLTSLLTVQKLDPTFTDMNQLKEQRVNVGYPNGSFVHELLIAQGFHPSKLVIYNNMAHCGSLFLNGTIAAAFDEIPYLKVLTTTYCTNCTIVGPTMKSNGFGYVFPKGSQLGRDVSKGILDIMESGVLQEIENKWFKGNISSPDPNSLISTTLGLESFWGLFLVTGAVSSSALIVALARFLHEHRHVLKLSTVSVWKRFLLLLKIFDEKDLTSPALRKNRRDESPEVKDVRFESHPSHSCDSSYRNGELSPCNFDDFHGDLSATPQPSPSR | 938 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 86837837 | 86842329 | + | Tan0015568.1 | Tan04g2741 | 751145 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan04g2741 | 938 | Pfam | Bacterial extracellular solute-binding proteins, family 3 | 487 | 586 | IPR001638 | - | |
Tan04g2741 | 938 | FunFam | Glutamate receptor | 578 | 708 | - | - | |
Tan04g2741 | 938 | PIRSF | IGluLR_plant | 4 | 919 | IPR017103 | - | |
Tan04g2741 | 938 | MobiDBLite | consensus disorder prediction | 884 | 905 | - | - | |
Tan04g2741 | 938 | FunFam | Glutamate receptor | 155 | 313 | - | - | |
Tan04g2741 | 938 | MobiDBLite | consensus disorder prediction | 884 | 912 | - | - | |
Tan04g2741 | 938 | Pfam | Receptor family ligand binding region | 52 | 399 | IPR001828 | - | |
Tan04g2741 | 938 | SMART | GluR_14 | 460 | 805 | IPR001320 | GO:0015276(InterPro)|GO:0016020(InterPro) | |
Tan04g2741 | 938 | SUPERFAMILY | Periplasmic binding protein-like I | 27 | 440 | IPR028082 | - | |
Tan04g2741 | 938 | CDD | PBP1_GABAb_receptor_plant | 35 | 419 | IPR044440 | - | |
Tan04g2741 | 938 | SUPERFAMILY | Periplasmic binding protein-like II | 446 | 806 | - | - | |
Tan04g2741 | 938 | PANTHER | OS06G0188250 PROTEIN | 22 | 488 | IPR015683 | - | |
Tan04g2741 | 938 | Gene3D | - | 27 | 157 | - | - | |
Tan04g2741 | 938 | Gene3D | - | 319 | 464 | - | - | |
Tan04g2741 | 938 | CDD | GluR_Plant | 459 | 803 | - | - | |
Tan04g2741 | 938 | Gene3D | - | 579 | 707 | - | - | |
Tan04g2741 | 938 | Gene3D | - | 471 | 578 | - | - | |
Tan04g2741 | 938 | Gene3D | - | 732 | 810 | - | - | |
Tan04g2741 | 938 | Gene3D | - | 158 | 317 | - | - | |
Tan04g2741 | 938 | FunFam | Glutamate receptor | 460 | 579 | - | - | |
Tan04g2741 | 938 | Pfam | Ligand-gated ion channel | 805 | 834 | IPR001320 | GO:0015276(InterPro)|GO:0016020(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g2792 | Tan-Chr2:96193127 | Tan04g2741 | Tan-Chr4:86837837 | 1.20E-219 | dispersed | |
Tan02g2793 | Tan-Chr2:96223220 | Tan04g2741 | Tan-Chr4:86837837 | 5.90E-238 | dispersed | |
Tan02g2794 | Tan-Chr2:96237029 | Tan04g2741 | Tan-Chr4:86837837 | 9.40E-180 | dispersed | |
Tan04g2741 | Tan-Chr4:86837837 | Tan09g1644 | Tan-Chr9:68080492 | 4.70E-174 | dispersed | |
Tan04g2741 | Tan-Chr4:86837837 | Tan04g2742 | Tan-Chr4:86837837 | 0.00E+00 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan04g2741 | K05387 | - | csv:101213301 | 1563.13 |