Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g2747 ATGAGTCGGGAGCAGAAGCGGGGAAAGCAGGACAAAGGTTCTGATGATGTCCAGAAGGTGATTGTTGCAGTGAAGGCTTCCAAAGAAATTCCTAAAACTGCATTGGTTTGGGCGTTGACTCATGTTGTTCAAATTGGAGATTGCATAACTCTGCTGGTTGTTGTCCCTTCTCAAAGCTCTGGTAGAAAATTCTGGGGTTTTCCAAGATTTGCCGGGGACTGCGCAAGCGGTCACAAGAAAGCTCACTCTGGAACAAGCTCGGAGCAGAAATGTGATATTACCGATTCCTGCTCACAGATGATCCTTCAGCTTCATGATGTTTACGATCCAAATAAAATAAACGTGAAAATTAAAATTGTTTCGGGGTCGCCTAGTGGGGCTGTAGCTGCTGAGGCTAAGAGAGCTCAAGCTAGTTGGGTTGTATTAGACAAACAGCTCAAACACGAGGAGAAATGTTGCATGGAAGAATTACAGTGCAACATTGTGGTAATGAAGCGATCGCAACCGAAAGTTCTTCGCTTGAATCTGGTTGGGTCTCCAAAGAAGGAACCAGAAGTGCCCTCTCCGTTACCTTCTGATATAGATGAAGGGTCTGAAAACCATCAAAAGGAAAATAATGATCCTCTGGATTTTATTCGTGGACCAGTTGTGACCCCCAATAGCAGTCCAGAGTTGGGCACACCTTTTACCGCCACTGAAGCTGGAACATCATCAGTGTCAAGCTCAGATCCTGGAACTTCACCATTTTTCAACTCTGAAATGAATGGAGACACAAAGAAAGAGGAATTGTTTGTTATCAAGGAAAATAAAGAACTTGATGCTGCTAGTTCAGACTCAGATATTGAAAACTTATCTATATCTTCGGGGAGCTTAAGATTCCAACCATGGATGACAGAGTTTCTAAGTTCTCATCTTCAATCCTCACAACACATAAGTGGAAGGTCCCAGAGATGTGATGATAGGAATCAAGTGTCAACAAGAAAATCTTTTCTACCAAAGTCTTCAAAACTAGATAGAGAATCTAGTATTGGAATGTCAAGCCATAGAAGTGATAATGATTTCCATGGGGATGTACGAGATGCAGTTTCATTATCGAGGAACTCGCCACCAGGCCCCCCTCCATTATGTTCAATATGCCAACACAAGGCACCGGTTTTTGGAAAACCTCCAAGGTGGTTCAGCTATGCTGAGCTGGAGCTCGCTACAGGTGGATTTTCACAAGCCAACTTTTTGGCAGAAGGAGGATATGGATCGGTTCACAGAGGGGTACTCCCGGACGGACAGGTGGTCGCTGTCAAGCAGCACAAACTAGCTAGTTCTCAGGGAGACCTTGAATTTTGTTCAGAAGTCGAAGTTCTTAGCTGTGCACAGCATCGAAATGTCGTGATGTTGATTGGCTTTTGTATAGAGGAGAAAAGAAGGTTGCTGGTTTATGAATACATCTGCAATGGCTCATTGGACTCTCATCTATATGGACGTCAACAAGAGCCATTAGAATGGTCTGCACGGCAAAAAATTGCAGTGGGAGCGGCAAGGGGGCTACGATATCTCCACGAAGAATGTAGAGTGGGTTGCATCGTTCACCGGGATATGCGACCAAACAACATTCTTATCACCCATGATTTTGAGCCACTGGTTGGAGATTTTGGGCTTGCGAGGTGGCAACCGGACGGAGATACTGGTGTTGAGACAAGAGTTATTGGAACGTTTGGGTATTTGGCTCCAGAGTATGCTCAAAGTGGCCAAATCACGGAGAAAGCTGATGTTTATTCCTTTGGGGTAGTACTGGTGGAGCTAATTACTGGAAGAAAAGCCGTGGACCTTAGTCGGCCGAAAGGTCAACAGTGTCTCACTGAATGGGCACGCCCCCTGTTGGATGAACTCGTCATTGATGAACTGATTGATCCAAGGTTGGGGAATAGCTTCATGGAGCATGAGGTGTACTGCATGCTGCACGCCGCATCGTTATGCATCCGAAGAGATCCTAACACAAGGCCTCGTATGTCACAGGTTTTACGGATTCTGGAGGGCGACCTCGTCATGGATGCTAATTACTTGTCAACTCCCGGATACGATGTGGGAAATCGGAGTGGTCGGATGTGGACCGAGCAGCAGCAGCAAAACTACAGTGGCTCCTTATCAGAAGAGAACCTAGAGAGGTTCAATGAAAAGGTTTGTCTTGAAAGTTTAAGACCAGGCTACTGGGAAAGGGACAAGACAAGGAGGACTTCAAGTGGAAGTGATTTGTAA 2250 45.51 MSREQKRGKQDKGSDDVQKVIVAVKASKEIPKTALVWALTHVVQIGDCITLLVVVPSQSSGRKFWGFPRFAGDCASGHKKAHSGTSSEQKCDITDSCSQMILQLHDVYDPNKINVKIKIVSGSPSGAVAAEAKRAQASWVVLDKQLKHEEKCCMEELQCNIVVMKRSQPKVLRLNLVGSPKKEPEVPSPLPSDIDEGSENHQKENNDPLDFIRGPVVTPNSSPELGTPFTATEAGTSSVSSSDPGTSPFFNSEMNGDTKKEELFVIKENKELDAASSDSDIENLSISSGSLRFQPWMTEFLSSHLQSSQHISGRSQRCDDRNQVSTRKSFLPKSSKLDRESSIGMSSHRSDNDFHGDVRDAVSLSRNSPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGYGSVHRGVLPDGQVVAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEEKRRLLVYEYICNGSLDSHLYGRQQEPLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELITGRKAVDLSRPKGQQCLTEWARPLLDELVIDELIDPRLGNSFMEHEVYCMLHAASLCIRRDPNTRPRMSQVLRILEGDLVMDANYLSTPGYDVGNRSGRMWTEQQQQNYSGSLSEENLERFNEKVCLESLRPGYWERDKTRRTSSGSDL 749
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 86910117 86915849 + Tan0007174.1 Tan04g2747 751151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g2747 749 ProSiteProfiles Protein kinase domain profile. 405 686 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g2747 749 SUPERFAMILY Protein kinase-like (PK-like) 389 685 IPR011009 -
Tan04g2747 749 Gene3D Phosphorylase Kinase; domain 1 377 480 - -
Tan04g2747 749 PANTHER OS01G0750732 PROTEIN 136 688 IPR050885 -
Tan04g2747 749 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 481 684 - -
Tan04g2747 749 Gene3D Transferase(Phosphotransferase) domain 1 481 685 - -
Tan04g2747 749 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 377 480 - -
Tan04g2747 749 MobiDBLite consensus disorder prediction 342 360 - -
Tan04g2747 749 Gene3D HUPs 3 151 IPR014729 -
Tan04g2747 749 FunFam Dual-specific kinase DSK1-like 11 165 - -
Tan04g2747 749 Pfam Protein tyrosine and serine/threonine kinase 409 674 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan04g2747 749 CDD STKc_IRAK 411 677 - -
Tan04g2747 749 ProSitePatterns Tyrosine protein kinases specific active-site signature. 526 538 IPR008266 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan04g2747 749 MobiDBLite consensus disorder prediction 220 254 - -
Tan04g2747 749 MobiDBLite consensus disorder prediction 308 369 - -
Tan04g2747 749 MobiDBLite consensus disorder prediction 176 255 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4874 Tan-Chr1:114737251 Tan04g2747 Tan-Chr4:86910117 6.10E-161 dispersed
Tan01g4875 Tan-Chr1:114737251 Tan04g2747 Tan-Chr4:86910117 2.00E-136 dispersed
Tan04g0473 Tan-Chr4:3871529 Tan04g2747 Tan-Chr4:86910117 3.30E-80 dispersed
Tan04g2747 Tan-Chr4:86910117 Tan09g1162 Tan-Chr9:63947351 1.80E-229 dispersed
Tan04g2747 Tan-Chr4:86910117 Tan08g0167 Tan-Chr8:1415873 1.70E-86 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67518 PF07714 PK_Tyr_Ser-Thr 9.00E-41 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g2747 - - - 0.0