Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g2750 ATGGATTGTTTGTGGTTTATTGTGGAGCTCATCACAGCTGCAGCTTTCATAATATTTTCAACCATAATCATAATCCTCAAAACCTTGAAACCCATCTCCTCCAACTCTTCCCTGCAGCTTCCTTCCGGCTCCGTCGGCCTCCCTTTCGTCGGCGAAACCCTCCAGTTCGTTTCCTCCGCTTACTCTCCCCGCCCCGAAAGCTTCATGGACAAACGTCGCCATCGGTATGGGAAGGTTTTCAAGTCCCATATATTTGGAAGTCCAACAATTATTTCAACTGATGGTGAAGTGAGTAGGTTTATTCTACAAAGTGATGCAAAGAGTTTTGTGCCATCTTATCCAAAATCTTTGACAGAGTTGATGGGGAAGTCTTCTATTTTGCTCATCAATGGCAATTTCCATAGGAAAATTCATGGTCTTATTGGAGCCTTCTTCAAATCATCTCATCTCAAATCTCAATTAACTAAAGATATGCAAATATATCTTCAAAAATCCATCTCTATTTGGAGTTCTTCTCAACACAATCCTATCCACATACAAGATGAAGCCAAAAATATTGCCTTTGAAGTACTAGTAAAGACACTGATTAGTTTGGACCCTGGTGAAGAAATGGAATATTTGAAGAAACAATTTCAAGAATTCATTGTTGGGCTTATGGCTTTCCCAATAAACATTCCAGGAAGCAGACTTTACAAATCATTACAGGCCAAAAGGAAAATGGTTAAATTTGTGGAAGAAATTATAGAAGCTAGAAGAAAGAAGATGGATGAAAATTTGAATAATAATTATAATTATAATATTAATACAGTCCCAAATGATGTTGTGGATGTTTTGTTGAATGATGGAAGCCAACAAGTTACAAATGAATTAATAGCAGAAAATGTGATTGATATGATGATTCCAGGCCATGATTCAGTCCCAATTCTCATATCTTTGGCCATAAAATACCTTTCTGATTGCCCATCTTCCCTTCAACAATTGATGGAAGAAAACATGGAGTTGAAAAGACTTAAATCTCAGCTTGGAGAGCCATTGAAGTGGAATGATTACTTGTTCTTACCATTTACACAAAATGTCATATCGGAGACGTTAAGGATGGGAAACATTATAACAGGAGTGATGAGAAAGGCTATGAAAGACATTGAAATAAAAGGGTATTTAATACCTAAAGGATGGTGTGTCCTTACATATTTTAGGTCAGTTCATCTTGATGAAAACCACTTTGAAAGCCCTTACCATTTCAATCCATGGAGGTGGCAAAATAAAGACTCAAACAACTCAAATTTCACTCCTTTTGGAGGGGGACTAAGGTTGTGCCCTGGACTTGACTTGGCTAGATTGGAAGCTTCCATTTTCTTACACCACTTTGTCACTGAATTCAGGTGGGTGGCTGAAGAAGACAATATTATCAACTTCCCAACAGTAAGAATGAAGAAGAGAATGACAGTTTGGGTAAAGAAGAGAGAGGATAATTGTTGA 1479 37.66 MDCLWFIVELITAAAFIIFSTIIIILKTLKPISSNSSLQLPSGSVGLPFVGETLQFVSSAYSPRPESFMDKRRHRYGKVFKSHIFGSPTIISTDGEVSRFILQSDAKSFVPSYPKSLTELMGKSSILLINGNFHRKIHGLIGAFFKSSHLKSQLTKDMQIYLQKSISIWSSSQHNPIHIQDEAKNIAFEVLVKTLISLDPGEEMEYLKKQFQEFIVGLMAFPINIPGSRLYKSLQAKRKMVKFVEEIIEARRKKMDENLNNNYNYNINTVPNDVVDVLLNDGSQQVTNELIAENVIDMMIPGHDSVPILISLAIKYLSDCPSSLQQLMEENMELKRLKSQLGEPLKWNDYLFLPFTQNVISETLRMGNIITGVMRKAMKDIEIKGYLIPKGWCVLTYFRSVHLDENHFESPYHFNPWRWQNKDSNNSNFTPFGGGLRLCPGLDLARLEASIFLHHFVTEFRWVAEEDNIINFPTVRMKKRMTVWVKKREDNC 492
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 86931863 86939540 - Tan0003304.1 Tan04g2750 751154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g2750 492 Pfam Cytochrome P450 41 468 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g2750 492 Gene3D Cytochrome P450 30 488 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g2750 492 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 31 488 - -
Tan04g2750 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Tan04g2750 492 CDD CYP90-like 72 481 - -
Tan04g2750 492 PANTHER CYTOCHROME P450 26 39 460 - GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)|GO:0016709(PANTHER)
Tan04g2750 492 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g2750 492 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g2750 492 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g2750 492 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g2750 492 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g2750 492 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan04g2750 492 SUPERFAMILY Cytochrome P450 36 488 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2035 Tan-Chr3:75339534 Tan04g2750 Tan-Chr4:86931863 6.00E-141 dispersed
Tan04g0177 Tan-Chr4:1380257 Tan04g2750 Tan-Chr4:86931863 2.70E-101 dispersed
Tan04g2750 Tan-Chr4:86931863 Tan11g0420 Tan-Chr11:3357964 1.30E-74 dispersed
Tan04g2750 Tan-Chr4:86931863 Tan06g0181 Tan-Chr6:1603976 9.50E-195 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g2750 K12638 - csv:101212581 749.584