Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g2774 ATGATGGAAGAGATGTCTCCTGCTGTTTCTTTGACCCTTAGTTTGGGTAATCCAAAGTCTGATTGCTCAGGAAGTCCCAGCCATGTCGAATTTACACGCCTAAAGTTGGTGACAGACACGGTAAATTTGTTCTCTGCAGCGTCCCCTGACTCGGGTTCTTTTGGTAATGGTAGTTGCCATGATTTTAGTGGTATAGCTGATAGTGTAACTGTGTTGCAACCGAGTGATAGTGGTCAAGGTAGAGACGGTTTTTGGGGGTTGTTGCCAAAGAATGGCACGAATTTAACTGCAGATAAGGAAGATGTAACCTTATCTCCTATGGATAACCCTGATGAAATGATAGATGATGGGTTGTTTGCTATTGATGGTGGTGCTAATATTAATGTGCAAGAAGTTGTCAAGATTGGAGATGTTAGTAATGGTCATATTGTTGCCAAGGCTATAATCTTAGTGGAATCAGGGAAGATTCCTACTAGTGAACTTATTGTGGCGACAGTGAGCCCAGATTTAGAAGTATCGGCATCGTCAAAGCTAAACGTCCCTGCAGTAGTTTTCCAATCGAAAGGGGGGGATGGTGTTCATAAAGGTATTCGTAGTGTCTTTGAACGGGATTGTGTTCCCCTTTGGGGTTCTGTATCGATTTGTGGTAGAAGACCAGAAATGGAAGATGCAATTGCCGCGGTTCCTTGTTTTTCAAAGATTCCTATCAAAATGCTTGTAGGAAATGGTTTGCTTAATGGAATGGGACAAAGTTTAACACATCTCAACAGCCATTTTTTTGGTGTTTATGATGGACATGGGGGCTCTCAGGTTGCTGATTATTGTCGAGAGCGCCTACACTTGGCATTAGCTGAAGAGATAAGAGGCTTCAAACAAAATCTAAATAATGGAAGCAATGGAGAAAACTGGCAGCAGGATTGGGAGAGAACCTTTAACAATTGCTTTCTTAGGGTGGATGATGAAATAGAAGGAAAAGTTGGTAGAACAGTCAGTGGGAGTGATGGGGATGTTTCCGATATTAGCTTCGAGCCTGTTGCCCCGGAAACTGTTGGCTCTACCGCCATTGTTGCCTTGGTCTGTTCATCACACATCATAGTTGCAAACTGTGGTGATTCAAGAGCAGTCCTATGCCGTGGCAAAGAACCCATGGCGCTATCGGTCGACCATAAACCAAATCGGGAAGATGAATACGCTAGAATTGAATCATCAGGAGGCAAGGTCATCCAGTGGAACGGACATCGTGTGTTCGGTGTTCTTGCAATGTCAAGATCCATTGGTGATAGGTATTTGAAACCATGGATCATTCCCGATCCAGAAGTCATGTTCGTTCCTCGTGCGAAAGAAGACGAATGTCTTATTTTAGCCAGCGATGGTCTTTGGGATGTGATGACAAACGAGGAAGTCTGTGAAGTAGCTCGAAGACGGATTCTTCTTTGGCACAAAAAACATGGTGCTTCATCTCTCGCCAATCGGGGCACGGGAGTTGACCCAGCTGCACAAGCTGCAGCAGATTACCTTTCAATGCTTGCTCTCCAAAAGGGAAGCAAAGACAACATCTCTGTGATTGTAGTGGACTTGAAAGCTCAAAGGAAGTTCAAGGCCAAATCTTGA 1611 44.13 MMEEMSPAVSLTLSLGNPKSDCSGSPSHVEFTRLKLVTDTVNLFSAASPDSGSFGNGSCHDFSGIADSVTVLQPSDSGQGRDGFWGLLPKNGTNLTADKEDVTLSPMDNPDEMIDDGLFAIDGGANINVQEVVKIGDVSNGHIVAKAIILVESGKIPTSELIVATVSPDLEVSASSKLNVPAVVFQSKGGDGVHKGIRSVFERDCVPLWGSVSICGRRPEMEDAIAAVPCFSKIPIKMLVGNGLLNGMGQSLTHLNSHFFGVYDGHGGSQVADYCRERLHLALAEEIRGFKQNLNNGSNGENWQQDWERTFNNCFLRVDDEIEGKVGRTVSGSDGDVSDISFEPVAPETVGSTAIVALVCSSHIIVANCGDSRAVLCRGKEPMALSVDHKPNREDEYARIESSGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPDPEVMFVPRAKEDECLILASDGLWDVMTNEEVCEVARRRILLWHKKHGASSLANRGTGVDPAAQAAADYLSMLALQKGSKDNISVIVVDLKAQRKFKAKS 536
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 87199440 87203153 - Tan0010862.1 Tan04g2774 751178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g2774 536 SUPERFAMILY PP2C-like 201 527 IPR036457 -
Tan04g2774 536 ProSitePatterns PPM-type phosphatase domain signature. 259 267 IPR000222 GO:0043169(InterPro)
Tan04g2774 536 Gene3D - 195 536 IPR036457 -
Tan04g2774 536 CDD PP2Cc 210 526 IPR001932 -
Tan04g2774 536 Pfam Protein phosphatase 2C 229 519 IPR001932 -
Tan04g2774 536 ProSiteProfiles PPM-type phosphatase domain profile. 208 526 IPR001932 -
Tan04g2774 536 SMART PP2C_4 198 524 IPR001932 -
Tan04g2774 536 FunFam Protein phosphatase 2C 16 196 536 - -
Tan04g2774 536 PANTHER PROTEIN PHOSPHATASE 179 525 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1613 Tan-Chr2:74820624 Tan04g2774 Tan-Chr4:87199440 1.70E-147 dispersed
Tan02g1614 Tan-Chr2:74820624 Tan04g2774 Tan-Chr4:87199440 1.70E-147 dispersed
Tan04g2774 Tan-Chr4:87199440 Tan09g1217 Tan-Chr9:64519173 5.30E-74 dispersed
Tan04g2774 Tan-Chr4:87199440 Tan04g1322 Tan-Chr4:13953942 2.30E-32 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g2774 K14497 - csv:101203499 970.304