Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan04g2799 | ATGAATTCAAGTCCAAAGTCCTGCACCTCTCCTTTCACAGCAACTCAATGGCAAGAACTGGAACACCAAGCACTGATCTTCAAATACATGGTTTCAGGAGTACCAATCCCTCCTGATCTAATCTTCTCTGTGAAAAGAAGCTTGGATTCCTCCATTTCTGCAAGACTCTTCCCTCACCAACCCATTGGGTGGGGGTGTTTTGAGATGGGTTTTGGCAGAAAAGCAGACCCTGAGCCAGGAAGGTGCAGGAGAACAGATGGGAAAAAATGGAGATGCTCAAAAGAAGCTTATCCAGACTCCAAATACTGCGAGAGGCACATGCACAGAGGCAGAAACCGTTCAAGAAAGCCTGTGGAAATATCTTCAACGCCACCAACTCAAACGCCACCGCCTTTAATCCTCACTTCAAACAGGAGCCTCTCTTCTTCCACTCCAACCTCCTCTACCTATTCTCTCTCTACACTTTCTTCTTCTTCTTCTTCACTGACCTGTGAAACTCAGTCCTATCACCAAGCCCCTGCTGCTGCTGGTGGTTATCATGAATCCTCCATTCATCCATTTCTGTATCCTCAATCTTCCTCCTCCAGACCTCCATGTTCTGATTTCTCTCCAAACAATTCAAACCCTCAACTCTTTTTGTACTCAGGGACTCATTCTCAGGCTGACAAAGAGTACAGGGATATTAATGGTCCAAGAGAAGGTGTGGGCGTGCAGGCGTTCTTCCCCTCAGTTGCAGATTCTGCAAGAAGCATAGGTGAGGTTTATAGTCAGACAATGGGGATGGATTCTTATAAAGGATGCTCCCAATCTGTTTCCCAAAGCCACCAAATTTACAGTTCTAAACAGGCAAGGCAACAACAAGAGCAACACTGCTTTGTTTTGGGCACAGATTTCAATAAATCATCAAGATCAGCTAAAACAGAGGAAGAAGAAGATGATGCAGAAACCCAGAAGCCACTACTCCACTTCTTTGAGGATTGCCCACCAAAAAACTCAGATTCCTGGCTTGATTTAGCCTCAAATTCAAATGGTTAA | 1035 | 45.02 | MNSSPKSCTSPFTATQWQELEHQALIFKYMVSGVPIPPDLIFSVKRSLDSSISARLFPHQPIGWGCFEMGFGRKADPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEISSTPPTQTPPPLILTSNRSLSSSTPTSSTYSLSTLSSSSSSLTCETQSYHQAPAAAGGYHESSIHPFLYPQSSSSRPPCSDFSPNNSNPQLFLYSGTHSQADKEYRDINGPREGVGVQAFFPSVADSARSIGEVYSQTMGMDSYKGCSQSVSQSHQIYSSKQARQQQEQHCFVLGTDFNKSSRSAKTEEEEDDAETQKPLLHFFEDCPPKNSDSWLDLASNSNG | 344 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 87531207 | 87533326 | - | Tan0011980.1 | Tan04g2799 | 751203 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan04g2799 | 344 | MobiDBLite | consensus disorder prediction | 103 | 152 | - | - | |
Tan04g2799 | 344 | MobiDBLite | consensus disorder prediction | 132 | 152 | - | - | |
Tan04g2799 | 344 | Pfam | QLQ | 11 | 44 | IPR014978 | GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro) | |
Tan04g2799 | 344 | Pfam | WRC | 77 | 119 | IPR014977 | - | |
Tan04g2799 | 344 | SMART | QLQ_2 | 10 | 46 | IPR014978 | GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro) | |
Tan04g2799 | 344 | MobiDBLite | consensus disorder prediction | 323 | 344 | - | - | |
Tan04g2799 | 344 | ProSiteProfiles | QLQ domain profile. | 11 | 46 | IPR014978 | GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro) | |
Tan04g2799 | 344 | ProSiteProfiles | WRC domain profile. | 76 | 120 | IPR014977 | - | |
Tan04g2799 | 344 | PANTHER | GROWTH-REGULATING FACTOR 5 | 6 | 329 | IPR031137 | GO:0005634(InterPro)|GO:0006351(InterPro)|GO:0032502(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g1695 | Tan-Chr2:79638106 | Tan04g2799 | Tan-Chr4:87531207 | 1.20E-35 | dispersed | |
Tan03g1700 | Tan-Chr3:72965015 | Tan04g2799 | Tan-Chr4:87531207 | 4.80E-33 | dispersed | |
Tan04g2799 | Tan-Chr4:87531207 | Tan08g0018 | Tan-Chr8:438945 | 7.60E-66 | dispersed | |
Tan04g2799 | Tan-Chr4:87531207 | Tan04g2800 | Tan-Chr4:87531207 | 1.60E-193 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
27348 | PF08879 | WRC | 1.80E-21 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan04g2799 | - | - | - | 0.0 |