Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g2865 ATGGAGCCGTCTCATGAAGTTTCAGAAACGCCGGAGCAAATTATACTACGCTGGGACTCCGCCGCGCCGGAGGAAGTAAAAGATAAGATGATTTTTGATTCCGACAGGGAAGAGATCGACCGATACTTGCAGGCCGTCGACGAAATCCAGAGGTCGATGTCGTCGGCTTCGTTATCGGATGATCAGAACAAAGTCGATTCCGCTATGCAGATCGCCATGGCCAGGCTTGAGGACGAGTTCCGTCACATTCTGTCCAGTCACACGACTCCCATCGAGGTCGAGTCGCTTACTGATCCGAGTCCTTCTTCTCGCTCCATGTCGACTAGCGCCAGTGGTGTATTCGAGGATGAAAACGACGAGGAAGCGGATTTGCCGGAAGTTCAGCTCGATTTAACTGGTAGTCCAAGTTTCGGGTCAAGTGGACGATCGAGCTATCGAGCGACGAGCAGTATTCGTGAAATTGATCTGATACCTTCGGATGCGATTATCGATCTACGAAGTATTGCCGAGCGGATGATATCGGCGGGGTACCTGCGGGAGTGCATCCAAGTCTATGGCAGTGTGCGAAAGTCCACCTTCGACTCCAGCTTCAGACGGCTTGGAATTGAGAAACTGAGCATTGGAGATATCCAGAGGTTGGATTGGAACGAGCTGGAGACGAAGATCAGAAGGTGGATTAGAGCGGCAAAGGTTTCTATTAGGACTTTGTTTTCCAGCGAGAAGAAGCTCTGCGAGCAAATCTTTTATGGCATAGGGACCGCCATAGACGATGCTTGTTTCATGGAGACTGTTAAAGGCCCTGTGACTCAGTTGTTCAATTTTGCCGAAGCGATCAGTATAAGCCGCAGATCGCCGGAGAAGCTGTTCAAGATTCTAGACCTCCACGATGCCATAACGGATTTGATACCTGACATTGATGTGATATTCGAATCAAAATCCGCGGAATATATTCGGATTCAGGCGGCGGAGATTTTGTCGCGGCTGGCGGAGGCCGTCAGAGGGACTTTATCGGAGTTTGAAAACGCGGTGCTGCGAGAGCCGTCGCTGCATCCGGTGCCCGGCGGGACGCTTCATCCGTTGACAAGGTATGTAATGAACTATGTGAGTCTGATTTCCGATTACAAAGTGACCTTAGACGAGCTCATCGTGTCCAAACCATCGACGGGCTCGAGGTACTCGGCCGACCCCACAACCCCAGATATGGATTTCGCTGAGCTAGAGGGCAAAACGCCATTAGCGCTCCATCTGATATGGAGCATCGTGATTCTGCAGTTCAATTTGGAGGGCAAGTCCAGGCACTACAAAGACCCTTCTCTAGCTCATCTCTTCATCATGAACAACGTTCATTACATCGTTCAGAAGATAAAAGGATCCCCAGAATTGCGAGAAATGATCGGAGACGTTTATCTGAAAAGGATGACCGGGAAGTTTCGACAGGCGGCGACAAACTACGAGAGAACAACATGGGTGAATGTGCTGTATTGCCTACGAAACGAAGGGTTGAATGTGGGCGGGAGCTTTTCTTCCGCCCCCTCAAAGAGCGCTATTAGAGAGAGATTCAAGACTTTCAACGCCATGTTTGAGGAGGTTCACAGGACACAGTCGGCATGGTTGATACCAGATTCTCAGCTGAGGGAGGAGCTTCGCATATCCATTACTGAGAAGTTGATTCCAGCATACAGGTCGTTTCTTGGCCTCCATGGCCACCACATAGAGAGTGGAAGGCACCCAGAAAATTACATCAAGTACTCGGTCGAGGAACTGGAAAATGCCATCTTGGATTTCTTTGAGGGTTGCTCAGTAACCCATAACTTGAGAAGGAGATCTCACTGA 1833 49.86 MEPSHEVSETPEQIILRWDSAAPEEVKDKMIFDSDREEIDRYLQAVDEIQRSMSSASLSDDQNKVDSAMQIAMARLEDEFRHILSSHTTPIEVESLTDPSPSSRSMSTSASGVFEDENDEEADLPEVQLDLTGSPSFGSSGRSSYRATSSIREIDLIPSDAIIDLRSIAERMISAGYLRECIQVYGSVRKSTFDSSFRRLGIEKLSIGDIQRLDWNELETKIRRWIRAAKVSIRTLFSSEKKLCEQIFYGIGTAIDDACFMETVKGPVTQLFNFAEAISISRRSPEKLFKILDLHDAITDLIPDIDVIFESKSAEYIRIQAAEILSRLAEAVRGTLSEFENAVLREPSLHPVPGGTLHPLTRYVMNYVSLISDYKVTLDELIVSKPSTGSRYSADPTTPDMDFAELEGKTPLALHLIWSIVILQFNLEGKSRHYKDPSLAHLFIMNNVHYIVQKIKGSPELREMIGDVYLKRMTGKFRQAATNYERTTWVNVLYCLRNEGLNVGGSFSSAPSKSAIRERFKTFNAMFEEVHRTQSAWLIPDSQLREELRISITEKLIPAYRSFLGLHGHHIESGRHPENYIKYSVEELENAILDFFEGCSVTHNLRRRSH 610
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 87956744 87959846 + Tan0018739.1 Tan04g2865 751269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g2865 610 Pfam Exo70 exocyst complex subunit C-terminal 224 594 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Tan04g2865 610 SUPERFAMILY Cullin repeat-like 7 597 IPR016159 -
Tan04g2865 610 MobiDBLite consensus disorder prediction 90 113 - -
Tan04g2865 610 MobiDBLite consensus disorder prediction 1 20 - -
Tan04g2865 610 Gene3D Exocyst complex component Exo70 134 606 - -
Tan04g2865 610 Gene3D Exocyst complex component Exo70 14 121 - -
Tan04g2865 610 MobiDBLite consensus disorder prediction 90 122 - -
Tan04g2865 610 PANTHER EXOCYST COMPLEX PROTEIN EXO70 12 598 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(PANTHER)|GO:0006887(InterPro)
Tan04g2865 610 Pfam Exocyst complex component Exo70 N-terminal 12 85 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2865 Tan-Chr4:87956744 Tan09g2370 Tan-Chr9:73415933 7.60E-125 dispersed
Tan04g2865 Tan-Chr4:87956744 Tan05g2961 Tan-Chr5:81690153 6.80E-126 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g2865 K07195 - csv:101204229 1119.38