Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0014 ATGCCTGATATTAGAGGCAAGAGATCTCCCTGTCAATTATTGTGTGAAGAAGGAGGTACTACCATGTCTTCAATGTTCTATAGATGGAATCCTTTAAGATTTATCATTCAGGGGCTGCTACTGTTTTCATTGTTGAGGTTGAATTATGCATCCACAGATCCTGATGTGGAAGGAGAAGCTTTGGTTGATTTGTTAGGGGCACTAAATGATTCCAATCATCACATAACTGATTGGAATTATCATTTTGTAAGCCCTTGCTTTAGCTGGTCGCATATTACCTGCCGAAATGGAAATGTCATATCCTTGAGCTTGGGTTCAGTAGGATTTTCAGGATCACTCTCTCGTTCAATTACCAAACTGAAATTTTTGGCCAGCTTGGATTTGCAGAATAATAATATAGCAGGTGATCTACCAGATTATCTAGCTAACATGACCCACCTACAGAATTTGAATCTTGCTAATAATAACTTCAATGGCCCTATACCTGCGGCTTGGGGTCATCTTGTTGGTCTAAAGCATCTGGATCTCTCAGATAACAACTTAACAGGAGAAGTTCCAGCACAGTTCTTTTCAATTCCAATGTTCAACTTTTCAGGAACTGGTTTAAATTGTGGCTTTAGGTTGGATAAACCTTGTGTTTCTACCTCTCCCCATCGAGCTTCTGTTAAGAATTCAAAGTTTGGGGTAGTGGCAAGCACTGCAACTTGTGGGGGATTCATACTTCTGTCAATTGGTGCCTTCTTTGCTTATAGATGCTTCTACATGCATAAGCTTAAGGATTCTGTGTTTGTTGATGTTGCTGGTGAAGATGAATGTAAACTTTGCTTTGGGCAAATCAGAAGATTTTCGTGGCGGGAAATACAACTTGCTACTGATAACTTTAATGAAACAAACATCATCGGCCAAGGAGGCTTTGGAAAAGTATACAAAGGCATCCTCTCAGATGCCTCCAAGGTGGCTGTGAAACGGTTAACAGACTACAATAGTCCTGGTGGGGAGGCTGCATTCCTAAGAGAAGTTCAACTAATAAGCGTTGCTGTGCATAGAAATCTCCTCCGGTTGATTGGGTTCTGCACAACCACATCTGAGAGAATCCTTGTTTATCCATTCATGCAAAATCTTAGCGTGGCACATCGCTTGAGAGATTTAAAACCTGGAGAAAGAAGCTTGGACTGGGTCACGAGGAAACGGATTGCTTTTGGTGCAGCACATGGTTTGGAGTACTTGCATGAGCATTGTAATCCTAAGATCATTCATCGTGATCTGAAGGCTGCAAATATCTTATTAGACGATGACTTTGAAGCTGTTCTTGGAGATTTCGGGCTGGCCAAGCTAGTCGATACTAAAGTGACTCATATTACCACTCAAGTGCGCGGTACAATGGGCCACATTGCCCCAGAATACTTGTCCACAGGAAAATCGTCTGAAAAGACCGATGTTTTTGGATATGGTATAACCCTCCTTGAACTTGTCACTGGTCAGCGAGCAATAGACTTCTCCCGGCTTGAAGAGGAGGAAGATGTTCTTCTCCTTGATCATATAAAGAAGCTGCAGAGGGAGAATAGGCTTGAAGATGTTGTGGACAAAAACTTAAAGAGCTATGACGAGAAAGAAGTCGAAAACATAGTTCAGGTGGCATTGCTTTGCACTCAAAGTTCACCGGAGGACCGACCGAAAATGGCGGAAGTTGTGAACCTACTACATGGAGAAGGGCTGGCAGATAGGTGGGCAGAGTGGATGCAGCTTGAAGGGGTAAGAGATCAGGAAGTGTCTCTCTTGTGTCACCAATTTGTTTGGGGTGAAGAGTCAAGCCATGATCAAGAAGCCATACAGTTGTCTAAAGCCAGATAG 1851 42.63 MPDIRGKRSPCQLLCEEGGTTMSSMFYRWNPLRFIIQGLLLFSLLRLNYASTDPDVEGEALVDLLGALNDSNHHITDWNYHFVSPCFSWSHITCRNGNVISLSLGSVGFSGSLSRSITKLKFLASLDLQNNNIAGDLPDYLANMTHLQNLNLANNNFNGPIPAAWGHLVGLKHLDLSDNNLTGEVPAQFFSIPMFNFSGTGLNCGFRLDKPCVSTSPHRASVKNSKFGVVASTATCGGFILLSIGAFFAYRCFYMHKLKDSVFVDVAGEDECKLCFGQIRRFSWREIQLATDNFNETNIIGQGGFGKVYKGILSDASKVAVKRLTDYNSPGGEAAFLREVQLISVAVHRNLLRLIGFCTTTSERILVYPFMQNLSVAHRLRDLKPGERSLDWVTRKRIAFGAAHGLEYLHEHCNPKIIHRDLKAANILLDDDFEAVLGDFGLAKLVDTKVTHITTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRLEEEEDVLLLDHIKKLQRENRLEDVVDKNLKSYDEKEVENIVQVALLCTQSSPEDRPKMAEVVNLLHGEGLADRWAEWMQLEGVRDQEVSLLCHQFVWGEESSHDQEAIQLSKAR 616
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 220920 227763 - Tan0018123.1 Tan05g0014 751322
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0014 616 SUPERFAMILY L domain-like 58 193 - -
Tan05g0014 616 FunFam Somatic embryogenesis receptor-like kinase 1 371 587 - -
Tan05g0014 616 FunFam Somatic embryogenesis receptor kinase 1 263 370 - -
Tan05g0014 616 SMART serkin_6 294 567 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0014 616 Gene3D Ribonuclease Inhibitor 54 213 IPR032675 -
Tan05g0014 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 417 429 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g0014 616 FunFam Leucine-rich repeat receptor-like kinase 56 165 - -
Tan05g0014 616 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 42 615 - -
Tan05g0014 616 SUPERFAMILY Protein kinase-like (PK-like) 275 567 IPR011009 -
Tan05g0014 616 Pfam Protein tyrosine and serine/threonine kinase 298 566 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g0014 616 Pfam Leucine rich repeat 123 181 IPR001611 GO:0005515(InterPro)
Tan05g0014 616 ProSitePatterns Protein kinases ATP-binding region signature. 300 322 IPR017441 GO:0005524(InterPro)
Tan05g0014 616 Gene3D Phosphorylase Kinase; domain 1 263 370 - -
Tan05g0014 616 ProSiteProfiles Protein kinase domain profile. 294 580 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0014 616 Pfam Leucine rich repeat N-terminal domain 57 94 IPR013210 -
Tan05g0014 616 Gene3D Transferase(Phosphotransferase) domain 1 371 586 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1395 Tan-Chr1:13867517 Tan05g0014 Tan-Chr5:220920 4.50E-170 dispersed
Tan01g1396 Tan-Chr1:13867517 Tan05g0014 Tan-Chr5:220920 4.50E-170 dispersed
Tan05g0014 Tan-Chr5:220920 Tan10g1711 Tan-Chr10:43391278 8.20E-127 dispersed
Tan05g0014 Tan-Chr5:220920 Tan05g0015 Tan-Chr5:220920 1.7e-310 tandem
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67532 PF00069 Pkinase 6.90E-44 CL0016 Tan PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0014 - - - 0.0