Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan05g0014 | ATGCCTGATATTAGAGGCAAGAGATCTCCCTGTCAATTATTGTGTGAAGAAGGAGGTACTACCATGTCTTCAATGTTCTATAGATGGAATCCTTTAAGATTTATCATTCAGGGGCTGCTACTGTTTTCATTGTTGAGGTTGAATTATGCATCCACAGATCCTGATGTGGAAGGAGAAGCTTTGGTTGATTTGTTAGGGGCACTAAATGATTCCAATCATCACATAACTGATTGGAATTATCATTTTGTAAGCCCTTGCTTTAGCTGGTCGCATATTACCTGCCGAAATGGAAATGTCATATCCTTGAGCTTGGGTTCAGTAGGATTTTCAGGATCACTCTCTCGTTCAATTACCAAACTGAAATTTTTGGCCAGCTTGGATTTGCAGAATAATAATATAGCAGGTGATCTACCAGATTATCTAGCTAACATGACCCACCTACAGAATTTGAATCTTGCTAATAATAACTTCAATGGCCCTATACCTGCGGCTTGGGGTCATCTTGTTGGTCTAAAGCATCTGGATCTCTCAGATAACAACTTAACAGGAGAAGTTCCAGCACAGTTCTTTTCAATTCCAATGTTCAACTTTTCAGGAACTGGTTTAAATTGTGGCTTTAGGTTGGATAAACCTTGTGTTTCTACCTCTCCCCATCGAGCTTCTGTTAAGAATTCAAAGTTTGGGGTAGTGGCAAGCACTGCAACTTGTGGGGGATTCATACTTCTGTCAATTGGTGCCTTCTTTGCTTATAGATGCTTCTACATGCATAAGCTTAAGGATTCTGTGTTTGTTGATGTTGCTGGTGAAGATGAATGTAAACTTTGCTTTGGGCAAATCAGAAGATTTTCGTGGCGGGAAATACAACTTGCTACTGATAACTTTAATGAAACAAACATCATCGGCCAAGGAGGCTTTGGAAAAGTATACAAAGGCATCCTCTCAGATGCCTCCAAGGTGGCTGTGAAACGGTTAACAGACTACAATAGTCCTGGTGGGGAGGCTGCATTCCTAAGAGAAGTTCAACTAATAAGCGTTGCTGTGCATAGAAATCTCCTCCGGTTGATTGGGTTCTGCACAACCACATCTGAGAGAATCCTTGTTTATCCATTCATGCAAAATCTTAGCGTGGCACATCGCTTGAGAGATTTAAAACCTGGAGAAAGAAGCTTGGACTGGGTCACGAGGAAACGGATTGCTTTTGGTGCAGCACATGGTTTGGAGTACTTGCATGAGCATTGTAATCCTAAGATCATTCATCGTGATCTGAAGGCTGCAAATATCTTATTAGACGATGACTTTGAAGCTGTTCTTGGAGATTTCGGGCTGGCCAAGCTAGTCGATACTAAAGTGACTCATATTACCACTCAAGTGCGCGGTACAATGGGCCACATTGCCCCAGAATACTTGTCCACAGGAAAATCGTCTGAAAAGACCGATGTTTTTGGATATGGTATAACCCTCCTTGAACTTGTCACTGGTCAGCGAGCAATAGACTTCTCCCGGCTTGAAGAGGAGGAAGATGTTCTTCTCCTTGATCATATAAAGAAGCTGCAGAGGGAGAATAGGCTTGAAGATGTTGTGGACAAAAACTTAAAGAGCTATGACGAGAAAGAAGTCGAAAACATAGTTCAGGTGGCATTGCTTTGCACTCAAAGTTCACCGGAGGACCGACCGAAAATGGCGGAAGTTGTGAACCTACTACATGGAGAAGGGCTGGCAGATAGGTGGGCAGAGTGGATGCAGCTTGAAGGGGTAAGAGATCAGGAAGTGTCTCTCTTGTGTCACCAATTTGTTTGGGGTGAAGAGTCAAGCCATGATCAAGAAGCCATACAGTTGTCTAAAGCCAGATAG | 1851 | 42.63 | MPDIRGKRSPCQLLCEEGGTTMSSMFYRWNPLRFIIQGLLLFSLLRLNYASTDPDVEGEALVDLLGALNDSNHHITDWNYHFVSPCFSWSHITCRNGNVISLSLGSVGFSGSLSRSITKLKFLASLDLQNNNIAGDLPDYLANMTHLQNLNLANNNFNGPIPAAWGHLVGLKHLDLSDNNLTGEVPAQFFSIPMFNFSGTGLNCGFRLDKPCVSTSPHRASVKNSKFGVVASTATCGGFILLSIGAFFAYRCFYMHKLKDSVFVDVAGEDECKLCFGQIRRFSWREIQLATDNFNETNIIGQGGFGKVYKGILSDASKVAVKRLTDYNSPGGEAAFLREVQLISVAVHRNLLRLIGFCTTTSERILVYPFMQNLSVAHRLRDLKPGERSLDWVTRKRIAFGAAHGLEYLHEHCNPKIIHRDLKAANILLDDDFEAVLGDFGLAKLVDTKVTHITTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRLEEEEDVLLLDHIKKLQRENRLEDVVDKNLKSYDEKEVENIVQVALLCTQSSPEDRPKMAEVVNLLHGEGLADRWAEWMQLEGVRDQEVSLLCHQFVWGEESSHDQEAIQLSKAR | 616 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 220920 | 227763 | - | Tan0018123.1 | Tan05g0014 | 751322 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan05g0014 | 616 | SUPERFAMILY | L domain-like | 58 | 193 | - | - | |
Tan05g0014 | 616 | FunFam | Somatic embryogenesis receptor-like kinase 1 | 371 | 587 | - | - | |
Tan05g0014 | 616 | FunFam | Somatic embryogenesis receptor kinase 1 | 263 | 370 | - | - | |
Tan05g0014 | 616 | SMART | serkin_6 | 294 | 567 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan05g0014 | 616 | Gene3D | Ribonuclease Inhibitor | 54 | 213 | IPR032675 | - | |
Tan05g0014 | 616 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 417 | 429 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan05g0014 | 616 | FunFam | Leucine-rich repeat receptor-like kinase | 56 | 165 | - | - | |
Tan05g0014 | 616 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 42 | 615 | - | - | |
Tan05g0014 | 616 | SUPERFAMILY | Protein kinase-like (PK-like) | 275 | 567 | IPR011009 | - | |
Tan05g0014 | 616 | Pfam | Protein tyrosine and serine/threonine kinase | 298 | 566 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan05g0014 | 616 | Pfam | Leucine rich repeat | 123 | 181 | IPR001611 | GO:0005515(InterPro) | |
Tan05g0014 | 616 | ProSitePatterns | Protein kinases ATP-binding region signature. | 300 | 322 | IPR017441 | GO:0005524(InterPro) | |
Tan05g0014 | 616 | Gene3D | Phosphorylase Kinase; domain 1 | 263 | 370 | - | - | |
Tan05g0014 | 616 | ProSiteProfiles | Protein kinase domain profile. | 294 | 580 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan05g0014 | 616 | Pfam | Leucine rich repeat N-terminal domain | 57 | 94 | IPR013210 | - | |
Tan05g0014 | 616 | Gene3D | Transferase(Phosphotransferase) domain 1 | 371 | 586 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g1395 | Tan-Chr1:13867517 | Tan05g0014 | Tan-Chr5:220920 | 4.50E-170 | dispersed | |
Tan01g1396 | Tan-Chr1:13867517 | Tan05g0014 | Tan-Chr5:220920 | 4.50E-170 | dispersed | |
Tan05g0014 | Tan-Chr5:220920 | Tan10g1711 | Tan-Chr10:43391278 | 8.20E-127 | dispersed | |
Tan05g0014 | Tan-Chr5:220920 | Tan05g0015 | Tan-Chr5:220920 | 1.7e-310 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67532 | PF00069 | Pkinase | 6.90E-44 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan05g0014 | - | - | - | 0.0 |