Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0043 ATGGAGGGAAGAGGAGGGAGTGTTAATAATGAAGCTCCAAATGCAAAGTTTGAATTCACTCCAACATGGATTGTTGCTGTTGTTTCATCCATTATTGTTCTCATTTCCTTCTCTGTTGAACGTGGCCTTCATCGTCTTGGACAGTTGTTGAAACATAAACAACAGGATGAACTGAATCACGCGTTGCTGAAATTAAAGGAAGAGTTGATGATTTTAGGGTTTATCTCCCTATTATTGAATGTGTTTCAAGGAGCAATTGGACGTGTTTGTATGCCCAAAGATTTTGCAAACCATATGCTTCCCTGCAAGAGAACTACAACAGTGGTTAACCATTTCTCATCTCCAACTTTTTTCGACGATTATAAAATTCACCGTCATCTATTGTCAATACAAACTAATTTCCAACATTGCGGACGAAGAGGAAAGGTTCCTCTTTTGTCATTGGAAGCTCTGCATCAGCTTCATATTTTCATATTTGTGTTGGCTGTTGTTCATGTTGTCTTCTGTGCTACAACCATGCTTCTAGCTGCTGCAAAGATACAACTATGGAAGAGGTGGGAAGCATCTACACAATATCAAAATGATAATGAGTTTGGAGAACGTGCCCAAGGATATTGGAAAAACGCTGCTGTCATAGCTTGGATGGTGGCATTTGTGAAGCAGTTTTATGGATCAATCACAAAGTCCGATTACACTTCTCTTCGACGAGGCTTTATAAAGAAACATTGCCCTGAGAACCCTAATTTTAATTTCTATGAGCACATTACAAAGTCATATAAACATGATTTCAAGAAAGTTGTAGGCATAAGTTGGTATCTTTGGGTATTTGTTGTGCTCTTCTTGCTGCTTAATCTTGAAGGATGGCACACTTATTTTTGGTTGTCCTTTCTACCATTAATTATGCTACTCCTAGTGGGGGCAAAGTTGGAATACATAATAACCCGTATGGCTCAAGAATTAAACTTAAGAATAGGAGACAATGAAGAAGCACAACAACAAAATGACATTAGAATTCGAATACAACAACGTAGGGAGATGAAACGACATGGTAGCCATGCAGTGAATCCCTCGGATGAACACTTTTGGTTTGCTCGTCCTTCTCTTGTTCTTGTCTTGATTCACTTCATTCTCTTCCAAAACTCTTTCGAGATCGCTTTCTTCTTTTGGATTTGGACGACTTATGGATTTAGGTCTTGCATTATGGAGAAACCCGCGTTCGTTATAACCCGATTATTCTTAGGTGCAATTGTCCAAGTGCTATGCAGTTACAGCACATTGCCCTTGTATTCTTTAGTCACTCAGGTTGTAATCCCAAACTTACCTCTAGAAGATACACAAAACAAGCTAAGAGTCTACCTTGAACTTAAGAAAACTTGTAGCCCCTAG 1386 38.96 MEGRGGSVNNEAPNAKFEFTPTWIVAVVSSIIVLISFSVERGLHRLGQLLKHKQQDELNHALLKLKEELMILGFISLLLNVFQGAIGRVCMPKDFANHMLPCKRTTTVVNHFSSPTFFDDYKIHRHLLSIQTNFQHCGRRGKVPLLSLEALHQLHIFIFVLAVVHVVFCATTMLLAAAKIQLWKRWEASTQYQNDNEFGERAQGYWKNAAVIAWMVAFVKQFYGSITKSDYTSLRRGFIKKHCPENPNFNFYEHITKSYKHDFKKVVGISWYLWVFVVLFLLLNLEGWHTYFWLSFLPLIMLLLVGAKLEYIITRMAQELNLRIGDNEEAQQQNDIRIRIQQRREMKRHGSHAVNPSDEHFWFARPSLVLVLIHFILFQNSFEIAFFFWIWTTYGFRSCIMEKPAFVITRLFLGAIVQVLCSYSTLPLYSLVTQVVIPNLPLEDTQNKLRVYLELKKTCSP 461
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 526792 540574 - Tan0016613.1 Tan05g0043 751351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0043 461 Pfam Mlo family 16 435 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Tan05g0043 461 PANTHER MLO-LIKE PROTEIN 1 12 435 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0043 Tan-Chr5:526792 Tan06g2192 Tan-Chr6:72142528 5.40E-115 dispersed
Tan05g0043 Tan-Chr5:526792 Tan01g2581 Tan-Chr1:38371651 5.10E-89 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0043 K08472 - csv:101216903 675.626