Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0046 ATGGCGGTTCAAGAATCTCCATTGAAGCTCTACTCCTACTGGATCAGTACTTGTGCTCAACGTGTTCGAATAGCCCTTAACTTAAAAGGGCTAAACTTTGAGTACAAAGCTGTTGACCTTATTAAGGGAGAGCATTTGAGTCCCGACTATCTAAAGCTCAATCCAGTTGGTTTTGTACCAACCCTTGTGGATGGGGATATTGTTATTGCAGACTCTTTTGCCATAATAATGTATTTGGAGGAAAAGTATCCTCAGCATCCTCTGTTGCCTAGTGATCTTCATAAAAGGGCTATTAATTACCAGGCTGCAAATATTGTTTCTTCAAGCATACAGCCTCTTCAAAATTTAATTGTTGAGAATTACGTTGAGGAAAAATGTGGTCCAGAGGAGAAACTTTCTTGGGTTCATATGATCATTGGAAAAGGTTTTTTAGCACTCGAGAAGTTGCTAAAAGTTCATTCTGGAAAATTTGCTACTGGAGACGAAATTTATCTGGTTTGTTTCAACTTTGAGTTATGCCTAAGAGCCATCCATTACATATATATGCATGGAAGATCTTTGCATATCATCTTGTTTATTTTCACTTGGAATAAACCAATGATACGGGTTCGAGAGAATTTGGTTAGATTACAAATTTAG 639 37.4 MAVQESPLKLYSYWISTCAQRVRIALNLKGLNFEYKAVDLIKGEHLSPDYLKLNPVGFVPTLVDGDIVIADSFAIIMYLEEKYPQHPLLPSDLHKRAINYQAANIVSSSIQPLQNLIVENYVEEKCGPEEKLSWVHMIIGKGFLALEKLLKVHSGKFATGDEIYLVCFNFELCLRAIHYIYMHGRSLHIILFIFTWNKPMIRVRENLVRLQI 212
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 551853 556803 + Tan0021933.3 Tan05g0046 751354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0046 212 SUPERFAMILY GST C-terminal domain-like 87 166 IPR036282 -
Tan05g0046 212 Gene3D - 91 187 - -
Tan05g0046 212 Pfam Glutathione S-transferase, N-terminal domain 10 86 IPR004045 -
Tan05g0046 212 PANTHER MALEYLACETOACETATE ISOMERASE 7 166 - GO:0004364(PANTHER)|GO:0006559(PANTHER)|GO:0006749(PANTHER)|GO:0016034(PANTHER)
Tan05g0046 212 FunFam Glutathione S-transferase Z1 6 90 - -
Tan05g0046 212 NCBIfam maleylacetoacetate isomerase 9 166 IPR005955 GO:0003824(InterPro)|GO:0005737(InterPro)|GO:0009072(InterPro)
Tan05g0046 212 Gene3D Glutaredoxin 6 90 - -
Tan05g0046 212 SFLD Glutathione Transferase (cytosolic) 8 166 IPR040079 -
Tan05g0046 212 SUPERFAMILY Thioredoxin-like 5 90 IPR036249 -
Tan05g0046 212 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 87 IPR004045 -
Tan05g0046 212 CDD GST_N_Zeta 8 80 IPR034333 -
Tan05g0046 212 SFLD Main (cytGST) 8 166 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0044 Tan-Chr5:551853 Tan05g0046 Tan-Chr5:551853 6.50E-93 dispersed
Tan05g0046 Tan-Chr5:551853 Tan05g0051 Tan-Chr5:560484 1.50E-75 dispersed
Tan05g0045 Tan-Chr5:551853 Tan05g0046 Tan-Chr5:551853 1.80E-92 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0046 K01800 - csv:116401624 289.271