Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0048 ATGACTGCAAACGTGGCGTCGCCTCCGTTGAAGCTTTACTCGTACTGGAGGAGTTCTTGTTCTCACCGTGTACGAATCGCCCTAAACTTGAAAGGGCTAAATTTTGATTACAAAGCCGTTAATCTACTGAAAGGAGAGCAATTCACTCCCGAATATGAAAAGCTCAATCCTATCGGTTATGTACCTACTCTCGTCGATGGGGATGTTGTTATTGCCGACTCTTTTGCTATATTAATGTATTTGGAGGAGAAGTATCCTCAGCATCCTCTGTTGCCTCGTGATCTTAGTAAAAGAGCTGTTAATTATCAGGCTGCAAACATTGTTAGTTCTAGCATACAGCCTCTTCAAAATCTAGCTGTCCTGAAGTACGTTGAGGAAAAATCTGGTCCAGAGGAAAAACTTCATTGGGTTCAACGTGTGATCGAAAAGGGTTTTGCAGCACTTGAAAAGCTGCTAAAAGCTCATGCTGGAAAATTTGCTACTGGAGATGAAATATTTCTGGCGGACTTGTTTTTGGCTCCTCAAATTCATGGCGCCATTAATAGATTCAGTGTTGACATGTCCAAATTTCCCATTTTGTCCAGGTTGAATGAGGAATACAATGCTATACCAGCATTTCAAGATGCAGAGCCAGCAAGGCAGCCTGATGCTCCTAAAAGCTCTAGCTAA 669 42.3 MTANVASPPLKLYSYWRSSCSHRVRIALNLKGLNFDYKAVNLLKGEQFTPEYEKLNPIGYVPTLVDGDVVIADSFAILMYLEEKYPQHPLLPRDLSKRAVNYQAANIVSSSIQPLQNLAVLKYVEEKSGPEEKLHWVQRVIEKGFAALEKLLKAHAGKFATGDEIFLADLFLAPQIHGAINRFSVDMSKFPILSRLNEEYNAIPAFQDAEPARQPDAPKSSS 222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 560484 564090 + Tan0014532.1 Tan05g0048 751356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0048 222 SFLD Glutathione Transferase (cytosolic) 10 195 IPR040079 -
Tan05g0048 222 NCBIfam maleylacetoacetate isomerase 11 217 IPR005955 GO:0003824(InterPro)|GO:0005737(InterPro)|GO:0009072(InterPro)
Tan05g0048 222 FunFam Glutathione S-transferase Z1 9 92 - -
Tan05g0048 222 SUPERFAMILY Thioredoxin-like 6 93 IPR036249 -
Tan05g0048 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 8 89 IPR004045 -
Tan05g0048 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 94 219 IPR010987 -
Tan05g0048 222 Pfam Glutathione S-transferase, C-terminal domain 121 205 IPR004046 -
Tan05g0048 222 SUPERFAMILY GST C-terminal domain-like 89 218 IPR036282 -
Tan05g0048 222 CDD GST_N_Zeta 10 82 IPR034333 -
Tan05g0048 222 Pfam Glutathione S-transferase, N-terminal domain 9 82 IPR004045 -
Tan05g0048 222 CDD GST_C_Zeta 97 214 IPR034330 -
Tan05g0048 222 Gene3D - 93 220 - -
Tan05g0048 222 Gene3D Glutaredoxin 9 92 - -
Tan05g0048 222 PANTHER MALEYLACETOACETATE ISOMERASE 9 217 - GO:0004364(PANTHER)|GO:0006559(PANTHER)|GO:0006749(PANTHER)|GO:0016034(PANTHER)
Tan05g0048 222 FunFam Maleylacetoacetate isomerase 93 220 - -
Tan05g0048 222 SFLD Main (cytGST) 10 195 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0045 Tan-Chr5:551853 Tan05g0048 Tan-Chr5:560484 5.00E-95 dispersed
Tan05g0048 Tan-Chr5:560484 Tan05g0051 Tan-Chr5:560484 1.60E-93 dispersed
Tan05g0048 Tan-Chr5:560484 Tan05g0049 Tan-Chr5:560484 1.20E-104 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0048 K01800 - csv:101213302 374.015