Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0050 ATGACTGCAAACGTGGCGTCGCCTCCGTTGAAGCTTTACTCGTACTGGAGGAGTTCTTGTTCTCACCGTGTACGAATCGCCCTAAACTTGAAAGGGCTAAATTTTGATTACAAAGCCGTTAATCTACTGAAAGGAGAGCAATTCACTCCCGAATATGAAAAGCTCAATCCTATCGGTTATGTACCTACTCTCGTCGATGGGGATGTTGTTATTGCCGACTCTTTTGCTATATTAATGTATTTGGAGGAGAAGTATCCTCAGCATCCTCTGTTGCCTCGTGATCTTAGTAAAAGAGCTGTTAATTATCAGAAGTACGTTGAGGAAAAATCTGGTCCAGAGGAAAAACTTCATTGGGTTCAACGTGTGATCGAAAAGGGTTTTGCAGCACTTGAAAAGCTGCTAAAAGCTCATGCTGGAAAATTTGCTACTGGAGATGAAATATTTCTGGCGGACTTGTTTTTGGCTCCTCAAATTCATGGCGCCATTAATAGATTCAGTGTTGACATGGTATTGCTGGTTCTTAAAATTTTATGCAACTTACTCGTGTCATTGCTCTGCAAAGTTTTGTTAATAATAAAGTACTATTACACCTTGTACCACTCCGTCTATCATTGGCTCAATATTTTTTTGAAGAGCAGAGTCTATAGGCCTTCATTTGCACCTTCATTAGTTATCTTTCACATATAG 687 39.88 MTANVASPPLKLYSYWRSSCSHRVRIALNLKGLNFDYKAVNLLKGEQFTPEYEKLNPIGYVPTLVDGDVVIADSFAILMYLEEKYPQHPLLPRDLSKRAVNYQKYVEEKSGPEEKLHWVQRVIEKGFAALEKLLKAHAGKFATGDEIFLADLFLAPQIHGAINRFSVDMVLLVLKILCNLLVSLLCKVLLIIKYYYTLYHSVYHWLNIFLKSRVYRPSFAPSLVIFHI 228
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 560484 564090 + Tan0014532.3 Tan05g0050 751358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0050 228 SFLD Main (cytGST) 10 161 - -
Tan05g0050 228 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 8 89 IPR004045 -
Tan05g0050 228 Pfam Glutathione S-transferase, N-terminal domain 9 82 IPR004045 -
Tan05g0050 228 PANTHER MALEYLACETOACETATE ISOMERASE 103 169 - GO:0004364(PANTHER)|GO:0006559(PANTHER)|GO:0006749(PANTHER)|GO:0016034(PANTHER)
Tan05g0050 228 CDD GST_N_Zeta 10 82 IPR034333 -
Tan05g0050 228 SUPERFAMILY GST C-terminal domain-like 89 169 IPR036282 -
Tan05g0050 228 SFLD Glutathione Transferase (cytosolic) 10 161 IPR040079 -
Tan05g0050 228 Gene3D Glutaredoxin 9 92 - -
Tan05g0050 228 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 80 218 IPR010987 -
Tan05g0050 228 Gene3D - 93 175 - -
Tan05g0050 228 Pfam Glutathione S-transferase, C-terminal domain 94 160 IPR004046 -
Tan05g0050 228 FunFam Glutathione S-transferase Z1 9 92 - -
Tan05g0050 228 SUPERFAMILY Thioredoxin-like 6 93 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0050 Tan-Chr5:560484 Tan10g0356 Tan-Chr10:2895871 2.20E-53 dispersed
Tan05g0049 Tan-Chr5:560484 Tan05g0050 Tan-Chr5:560484 4.70E-110 tandem
Tan05g0050 Tan-Chr5:560484 Tan05g0051 Tan-Chr5:560484 2.80E-80 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0050 K01800 - csv:101213302 286.96