Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0081 ATGGCGACGTACTTTCACGGTGGTTCAGAAATCCAAGCGAATTCAGAAGGAATTCACACTCTTTACCTCATGAACCCCAATTATGTACCTTACTCTGACACCCACTCTCAGACGCCTCCCAATATGCTCTTTCTCAACCCTTCCAGCCACGCGCTTACCCCTTCCACTCTCCCTCACGCGCCTCCTTCTAACAACCACTTCGTCGGTATTCCCCTTCCCACCACCGACGCTCCTCGTCCATCCTACCACCACGAAATCTCCGCCCTCCATTCCCTTCCAGCTCAGCGTCTCCACTACAATCTATGGGCTCCTATGGACCCATCCCACCAACACCAAGGAATCTCCGCCACCACCAGCGAGTCCGCCGATTTAAGCTTCCGCCGACCGGGCACACAGCAGGGTGGTTTGTCGTTGACCCTGTCCTCCCAACAGTCGCTCTACCGGACACTATCGGCAGAGCAGGAGATCCAAGGCGGCGGTGGTACGGCGGGTATATCGCCGAGGAGTACTGGGGATGAAATAAGAGTGTCGGGAAACTCGGCGACGTCGGTGTCGGTGTCGGTGGTGTCGTCGAGTGGGTTAACGGGTGTTCAAAGCGTGATATTGGGGTCCAAGTACTTGAAAGCTGCACAAGAACTTTTGGATGAAGTGGTTCATGTTGGGAAAGGAAATTTAGATAAAAGCGACAAAGGGGATGAGACAAAGGACAAAATGAAGATGAAGATGAAGAAAGAATTCTCCAGTAGTACTCCTTCTGCCATTGCTGAAACTACTACTTCCCCTGATCTCACCACCGCTCAAAGACAGGATCTTCAGATGAAGAAAGCTAAGCTTATTGGCATGCTTGATGAGGTGGAGCAAAAATACAGAGAATACCATCAGCAAATGCAAGGAGTGGTAAGTAGTTTCGAGCAGGCGGCAGGGTTGGGGTCAGCGAAATCATACGCATGGCTTGCTTTACAAACAATTTCAAAGCAATTTCGGTGCTTAAAAGATGCAATATGTGCACAAATTAAAGCCACTGGTAAAAGCTTAGGGGAATTAGATCAGGATAATTGGTTGGGTCAGGGTGGTGGTGGTAAAATTGAAGGGTCACGATTGAGATACGTGGACCATCATCTACGGCAGCAAAGAGCTTTGCAACAATTGGGAATGATTCAACACAATACTTGGAGACCCCAACGAGGTTTGCCTGAACGTGCTGTTTCTGTTCTTCGTGCTTGGCTCTTTGAGCATTTCCTTCACCCATATCCCAAAGATTCAGACAAGATCATTCTCGCCAAACAAACCGGACTCACAAGGAGCCAAGTTTCTAATTGGTTTATAAATGCAAGAGTTCGTCTATGGAAGCCAATGGTAGAAGAAATGTACTTGGAAGAAATCAAAGATCAAGAACAAAATGGCGATTCCCACGACATGAACAGAAACAACAAAAAGGAAACCAACAAGCAACATGGAGGAGATGAGAATAATAATAATGTATCATCAGAAGCTTTTAAACTAAACCACCACCAAATGAAGGATCCACAATCCAAGACAGAAAATTTGATGAACAATCAAAACAACAACGTCTCCAACTCTTCAATCTCATCCTCCTCAATATTAGGATCCTTACAAATTACTCATTCAGGCTTCAACCTCGTACGACCATCCTCCGACATACTCTCAAGTCCCAAAAAACAAAGAACGACAAACAACCAGCTCGAAACCACCCCATCCACAAAAACCTACTCGTCCATGCTTTGTAGAGACATTAGTGACACAAAACACCTAATTCAGACCACTGCAGAGATGAACATGAATTCTTCTTCTACTACTACTGATAATAATAATCATAAATATAATCATGGAGGTGGATTTGGTTCGTACCCCATTGGTGAAATTGGATCAAGGTTCAATTCTGAGCTGTTGACACCAAGATTTCATGCAAATGGCGTCTCTCTCACTCTTGGCCTTCCACATTCAGATCATAATCTATCTCTTTCAGGAACCCAACAAAATTACCTCTCCAACCGAAACCTTCACTTGGCCAATCGACAACCCGATCATTTCTCCGACATCAATCCCGCCCCTCCGCCGCCTCATTCTGCCTCCACCACCGCCTACGACGCCGTCGATATTCAAACCACAAAAAGGTTTGCCGCCCAATTATTGCCTGATTTTGTCGCCTGA 2172 46.27 MATYFHGGSEIQANSEGIHTLYLMNPNYVPYSDTHSQTPPNMLFLNPSSHALTPSTLPHAPPSNNHFVGIPLPTTDAPRPSYHHEISALHSLPAQRLHYNLWAPMDPSHQHQGISATTSESADLSFRRPGTQQGGLSLTLSSQQSLYRTLSAEQEIQGGGGTAGISPRSTGDEIRVSGNSATSVSVSVVSSSGLTGVQSVILGSKYLKAAQELLDEVVHVGKGNLDKSDKGDETKDKMKMKMKKEFSSSTPSAIAETTTSPDLTTAQRQDLQMKKAKLIGMLDEVEQKYREYHQQMQGVVSSFEQAAGLGSAKSYAWLALQTISKQFRCLKDAICAQIKATGKSLGELDQDNWLGQGGGGKIEGSRLRYVDHHLRQQRALQQLGMIQHNTWRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKIILAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEIKDQEQNGDSHDMNRNNKKETNKQHGGDENNNNVSSEAFKLNHHQMKDPQSKTENLMNNQNNNVSNSSISSSSILGSLQITHSGFNLVRPSSDILSSPKKQRTTNNQLETTPSTKTYSSMLCRDISDTKHLIQTTAEMNMNSSSTTTDNNNHKYNHGGGFGSYPIGEIGSRFNSELLTPRFHANGVSLTLGLPHSDHNLSLSGTQQNYLSNRNLHLANRQPDHFSDINPAPPPPHSASTTAYDAVDIQTTKRFAAQLLPDFVA 723
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 745653 748719 - Tan0010340.1 Tan05g0081 751389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0081 723 ProSiteProfiles 'Homeobox' domain profile. 388 451 IPR001356 GO:0003677(InterPro)
Tan05g0081 723 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 143 491 IPR050224 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER)
Tan05g0081 723 SMART prehox3 195 336 IPR006563 -
Tan05g0081 723 MobiDBLite consensus disorder prediction 245 267 - -
Tan05g0081 723 Gene3D - 386 465 - -
Tan05g0081 723 SMART HOX_1 391 455 IPR001356 GO:0003677(InterPro)
Tan05g0081 723 Pfam Associated with HOX 200 334 IPR006563 -
Tan05g0081 723 Pfam Homeobox KN domain 408 447 IPR008422 GO:0003677(InterPro)|GO:0006355(InterPro)
Tan05g0081 723 SUPERFAMILY Homeodomain-like 392 457 IPR009057 -
Tan05g0081 723 MobiDBLite consensus disorder prediction 243 267 - -
Tan05g0081 723 CDD homeodomain 391 452 IPR001356 GO:0003677(InterPro)
Tan05g0081 723 Coils Coil 268 295 - -
Tan05g0081 723 MobiDBLite consensus disorder prediction 464 486 - -
Tan05g0081 723 MobiDBLite consensus disorder prediction 464 523 - -
Tan05g0081 723 MobiDBLite consensus disorder prediction 550 572 - -
Tan05g0081 723 MobiDBLite consensus disorder prediction 155 176 - -
Tan05g0081 723 FunFam BEL1-like homeodomain protein 9 394 456 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0894 Tan-Chr3:65173577 Tan05g0081 Tan-Chr5:745653 3.40E-51 dispersed
Tan05g0081 Tan-Chr5:745653 Tan08g1624 Tan-Chr8:65871483 9.20E-138 dispersed
Tan05g0081 Tan-Chr5:745653 Tan08g1623 Tan-Chr8:65871483 9.20E-138 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27364 PF07526 POX 1.90E-46 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0081 - - - 0.0