Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan05g0081 | ATGGCGACGTACTTTCACGGTGGTTCAGAAATCCAAGCGAATTCAGAAGGAATTCACACTCTTTACCTCATGAACCCCAATTATGTACCTTACTCTGACACCCACTCTCAGACGCCTCCCAATATGCTCTTTCTCAACCCTTCCAGCCACGCGCTTACCCCTTCCACTCTCCCTCACGCGCCTCCTTCTAACAACCACTTCGTCGGTATTCCCCTTCCCACCACCGACGCTCCTCGTCCATCCTACCACCACGAAATCTCCGCCCTCCATTCCCTTCCAGCTCAGCGTCTCCACTACAATCTATGGGCTCCTATGGACCCATCCCACCAACACCAAGGAATCTCCGCCACCACCAGCGAGTCCGCCGATTTAAGCTTCCGCCGACCGGGCACACAGCAGGGTGGTTTGTCGTTGACCCTGTCCTCCCAACAGTCGCTCTACCGGACACTATCGGCAGAGCAGGAGATCCAAGGCGGCGGTGGTACGGCGGGTATATCGCCGAGGAGTACTGGGGATGAAATAAGAGTGTCGGGAAACTCGGCGACGTCGGTGTCGGTGTCGGTGGTGTCGTCGAGTGGGTTAACGGGTGTTCAAAGCGTGATATTGGGGTCCAAGTACTTGAAAGCTGCACAAGAACTTTTGGATGAAGTGGTTCATGTTGGGAAAGGAAATTTAGATAAAAGCGACAAAGGGGATGAGACAAAGGACAAAATGAAGATGAAGATGAAGAAAGAATTCTCCAGTAGTACTCCTTCTGCCATTGCTGAAACTACTACTTCCCCTGATCTCACCACCGCTCAAAGACAGGATCTTCAGATGAAGAAAGCTAAGCTTATTGGCATGCTTGATGAGGTGGAGCAAAAATACAGAGAATACCATCAGCAAATGCAAGGAGTGGTAAGTAGTTTCGAGCAGGCGGCAGGGTTGGGGTCAGCGAAATCATACGCATGGCTTGCTTTACAAACAATTTCAAAGCAATTTCGGTGCTTAAAAGATGCAATATGTGCACAAATTAAAGCCACTGGTAAAAGCTTAGGGGAATTAGATCAGGATAATTGGTTGGGTCAGGGTGGTGGTGGTAAAATTGAAGGGTCACGATTGAGATACGTGGACCATCATCTACGGCAGCAAAGAGCTTTGCAACAATTGGGAATGATTCAACACAATACTTGGAGACCCCAACGAGGTTTGCCTGAACGTGCTGTTTCTGTTCTTCGTGCTTGGCTCTTTGAGCATTTCCTTCACCCATATCCCAAAGATTCAGACAAGATCATTCTCGCCAAACAAACCGGACTCACAAGGAGCCAAGTTTCTAATTGGTTTATAAATGCAAGAGTTCGTCTATGGAAGCCAATGGTAGAAGAAATGTACTTGGAAGAAATCAAAGATCAAGAACAAAATGGCGATTCCCACGACATGAACAGAAACAACAAAAAGGAAACCAACAAGCAACATGGAGGAGATGAGAATAATAATAATGTATCATCAGAAGCTTTTAAACTAAACCACCACCAAATGAAGGATCCACAATCCAAGACAGAAAATTTGATGAACAATCAAAACAACAACGTCTCCAACTCTTCAATCTCATCCTCCTCAATATTAGGATCCTTACAAATTACTCATTCAGGCTTCAACCTCGTACGACCATCCTCCGACATACTCTCAAGTCCCAAAAAACAAAGAACGACAAACAACCAGCTCGAAACCACCCCATCCACAAAAACCTACTCGTCCATGCTTTGTAGAGACATTAGTGACACAAAACACCTAATTCAGACCACTGCAGAGATGAACATGAATTCTTCTTCTACTACTACTGATAATAATAATCATAAATATAATCATGGAGGTGGATTTGGTTCGTACCCCATTGGTGAAATTGGATCAAGGTTCAATTCTGAGCTGTTGACACCAAGATTTCATGCAAATGGCGTCTCTCTCACTCTTGGCCTTCCACATTCAGATCATAATCTATCTCTTTCAGGAACCCAACAAAATTACCTCTCCAACCGAAACCTTCACTTGGCCAATCGACAACCCGATCATTTCTCCGACATCAATCCCGCCCCTCCGCCGCCTCATTCTGCCTCCACCACCGCCTACGACGCCGTCGATATTCAAACCACAAAAAGGTTTGCCGCCCAATTATTGCCTGATTTTGTCGCCTGA | 2172 | 46.27 | MATYFHGGSEIQANSEGIHTLYLMNPNYVPYSDTHSQTPPNMLFLNPSSHALTPSTLPHAPPSNNHFVGIPLPTTDAPRPSYHHEISALHSLPAQRLHYNLWAPMDPSHQHQGISATTSESADLSFRRPGTQQGGLSLTLSSQQSLYRTLSAEQEIQGGGGTAGISPRSTGDEIRVSGNSATSVSVSVVSSSGLTGVQSVILGSKYLKAAQELLDEVVHVGKGNLDKSDKGDETKDKMKMKMKKEFSSSTPSAIAETTTSPDLTTAQRQDLQMKKAKLIGMLDEVEQKYREYHQQMQGVVSSFEQAAGLGSAKSYAWLALQTISKQFRCLKDAICAQIKATGKSLGELDQDNWLGQGGGGKIEGSRLRYVDHHLRQQRALQQLGMIQHNTWRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKIILAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEIKDQEQNGDSHDMNRNNKKETNKQHGGDENNNNVSSEAFKLNHHQMKDPQSKTENLMNNQNNNVSNSSISSSSILGSLQITHSGFNLVRPSSDILSSPKKQRTTNNQLETTPSTKTYSSMLCRDISDTKHLIQTTAEMNMNSSSTTTDNNNHKYNHGGGFGSYPIGEIGSRFNSELLTPRFHANGVSLTLGLPHSDHNLSLSGTQQNYLSNRNLHLANRQPDHFSDINPAPPPPHSASTTAYDAVDIQTTKRFAAQLLPDFVA | 723 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 745653 | 748719 | - | Tan0010340.1 | Tan05g0081 | 751389 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan05g0081 | 723 | ProSiteProfiles | 'Homeobox' domain profile. | 388 | 451 | IPR001356 | GO:0003677(InterPro) | |
Tan05g0081 | 723 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 143 | 491 | IPR050224 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER) | |
Tan05g0081 | 723 | SMART | prehox3 | 195 | 336 | IPR006563 | - | |
Tan05g0081 | 723 | MobiDBLite | consensus disorder prediction | 245 | 267 | - | - | |
Tan05g0081 | 723 | Gene3D | - | 386 | 465 | - | - | |
Tan05g0081 | 723 | SMART | HOX_1 | 391 | 455 | IPR001356 | GO:0003677(InterPro) | |
Tan05g0081 | 723 | Pfam | Associated with HOX | 200 | 334 | IPR006563 | - | |
Tan05g0081 | 723 | Pfam | Homeobox KN domain | 408 | 447 | IPR008422 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Tan05g0081 | 723 | SUPERFAMILY | Homeodomain-like | 392 | 457 | IPR009057 | - | |
Tan05g0081 | 723 | MobiDBLite | consensus disorder prediction | 243 | 267 | - | - | |
Tan05g0081 | 723 | CDD | homeodomain | 391 | 452 | IPR001356 | GO:0003677(InterPro) | |
Tan05g0081 | 723 | Coils | Coil | 268 | 295 | - | - | |
Tan05g0081 | 723 | MobiDBLite | consensus disorder prediction | 464 | 486 | - | - | |
Tan05g0081 | 723 | MobiDBLite | consensus disorder prediction | 464 | 523 | - | - | |
Tan05g0081 | 723 | MobiDBLite | consensus disorder prediction | 550 | 572 | - | - | |
Tan05g0081 | 723 | MobiDBLite | consensus disorder prediction | 155 | 176 | - | - | |
Tan05g0081 | 723 | FunFam | BEL1-like homeodomain protein 9 | 394 | 456 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g0894 | Tan-Chr3:65173577 | Tan05g0081 | Tan-Chr5:745653 | 3.40E-51 | dispersed | |
Tan05g0081 | Tan-Chr5:745653 | Tan08g1624 | Tan-Chr8:65871483 | 9.20E-138 | dispersed | |
Tan05g0081 | Tan-Chr5:745653 | Tan08g1623 | Tan-Chr8:65871483 | 9.20E-138 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
27364 | PF07526 | POX | 1.90E-46 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan05g0081 | - | - | - | 0.0 |