Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0124 ATGATTCTTGCAGGCTTTTTCTCAGGCAGGCCTGCAGCAACTCTGGAAATGTTCCCTTCTTGGCCAATCAAATTCCAACAAACTCCAAGAGGAATTAGTTTGAGAGGAAGAGAAGAGAGCACAGATGAGTCAGGATCAGCTGTGAACACTCATACAATAAGCAAATCTGATCATCAATATCATCAACAACAACATAATCAATTGGAATTGGAATTGGAATTGGAACAAGAATCTTCAATGAGTAAAAAGGCATGTTCTTCTTCTTCTTCAGGTCATCAGGGCTTTATTCAGAAGCATCTGCAGCAGCAGATTCAACCTGAAATCATGCTCAGTGATGTTTCAACAACTGCACTATCACAACAACATCAGTCCCCTCAACCAAAGAGAAAAGGATGTGGTTCGATTTCAACATCACAGAAACAACTTGACGCTAAGACATTGAGACGTTTGGCTCAGAACAGAGAGGCTGCGAGGAAGAGTCGACTAAGAAAAAAGGCTTACGTACAGCAACTTGAGAGCAGTAGAATCAAGCTTACGCAGCTTGAACAAGACCTTCAACGGGCACGATCTCAGGGTTTGTTTCTGGGTGCTGGCGGCGGCATTGTCACCTCCGGAGCTGCAATGTTTGATATGGAATATGCAAGGTGGTTGGAAGAGGACCACCGGCAGACGGCGGAGCTGCGTGGGGGATTGGAGGCGCGTCTACCGGACGGGGAGCTGAGAGTGATGGTAGACGCCTGCATTTGCCATTACGACGAAATTTTCCGGCTGAAAGAAGAGGCTGCTAAGTCCGACGTCTTCCATCTCATCACCGGAATTTGGATGTCGCCGGCCGAGCGTTGCTTCCTTTGGATGGGCGGTTTCCGACCATCCGATCTCATTAAGATGTTAATGTCACAATTGGACCCAATAACAGAACAGCAAGTAATGGAAATTTACAAGCTACAGCATTCGTCGCAGCAGGCTGAGGATGCTTTATCCCAAGGCCTGGATCAGCTCCACCACTCTTTAACGGAGACCATCGCCGGCGGTCCGGTCATCGACGGAATCAACCACATGGTTTTGGCCATGGATAAGCTCTCAAATCTCCAAGGCTTTGTTCATCAGGCAGACATTTTGAGACAACAAACGCTTCACCAACTGCATAGGATACTCACTGTTCGACAAGCAGCCAAATGTTTTGTGGTCATTGGTGAATATTATAGTAGATTGAGAGCCCTAAGTTCCATATGGTCCTCTCGTCCAAAGGATGGTTGGGTGATGAGTGGTGAAGATAATTCATGTCAAACATCTACACATCATCAAGTGCATATGGTTGATCAAGCCAACTCGCAGCATCCCTTCTCAAGCATCTAA 1356 46.53 MILAGFFSGRPAATLEMFPSWPIKFQQTPRGISLRGREESTDESGSAVNTHTISKSDHQYHQQQHNQLELELELEQESSMSKKACSSSSSGHQGFIQKHLQQQIQPEIMLSDVSTTALSQQHQSPQPKRKGCGSISTSQKQLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQDLQRARSQGLFLGAGGGIVTSGAAMFDMEYARWLEEDHRQTAELRGGLEARLPDGELRVMVDACICHYDEIFRLKEEAAKSDVFHLITGIWMSPAERCFLWMGGFRPSDLIKMLMSQLDPITEQQVMEIYKLQHSSQQAEDALSQGLDQLHHSLTETIAGGPVIDGINHMVLAMDKLSNLQGFVHQADILRQQTLHQLHRILTVRQAAKCFVVIGEYYSRLRALSSIWSSRPKDGWVMSGEDNSCQTSTHHQVHMVDQANSQHPFSSI 451
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 981518 988629 - Tan0004550.2 Tan05g0124 751432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0124 451 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 148 163 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan05g0124 451 MobiDBLite consensus disorder prediction 79 100 - -
Tan05g0124 451 CDD bZIP_HBP1b-like 145 196 - -
Tan05g0124 451 Gene3D - 144 193 - -
Tan05g0124 451 MobiDBLite consensus disorder prediction 114 146 - -
Tan05g0124 451 PANTHER TRANSCRIPTION FACTOR TGA9 75 417 - -
Tan05g0124 451 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 143 187 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan05g0124 451 MobiDBLite consensus disorder prediction 62 78 - -
Tan05g0124 451 SUPERFAMILY Leucine zipper domain 145 188 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan05g0124 451 Coils Coil 164 191 - -
Tan05g0124 451 FunFam BZIP family transcription factor 144 193 - -
Tan05g0124 451 MobiDBLite consensus disorder prediction 45 61 - -
Tan05g0124 451 ProSiteProfiles DOG1 domain profile. 206 414 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Tan05g0124 451 SMART brlzneu 141 215 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan05g0124 451 MobiDBLite consensus disorder prediction 29 100 - -
Tan05g0124 451 Pfam bZIP transcription factor 144 186 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan05g0124 451 Pfam Seed dormancy control 224 299 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0124 Tan-Chr5:981518 Tan05g0126 Tan-Chr5:981518 3.10E-224 dispersed
Tan05g0123 Tan-Chr5:981518 Tan05g0124 Tan-Chr5:981518 3.40E-243 tandem
Tan05g0124 Tan-Chr5:981518 Tan05g0125 Tan-Chr5:981518 1.40E-221 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27375 PF14144 DOG1 3.70E-29 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0124 K14431 - csv:101223216 584.719