Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan05g0138 | ATGAGCGGCGAAAGCCGAAGGCGAGGCCGCGCAGACAAGACTAGGTCGAAGAAGCAGAGGGTAATCCGGTCCGCCGAGGAGGAGATCGAATCAAAGCTTGGATTTGATCTCTTCTCTGAAGGCGATAAGAGGCTTGGATGGTTGCTCACATTCGCTCCTTCATCTTTGGAGGATCAGGATACCGGAAAGGTCTATAGCTGTGTTGATCTTTATTTTGTGGCACAGGATGGCAGCAGTTTCAAGTCAAAATATAAATTCCGTCCTTATATCTATGCAGCCACAAAGGATAAAATGGGAACTGATGTGGAGGCTTATTTGAGACGACGTTACGAACGTCAAATAGCTGATATCGAGATTTTAGAAAAGGAAGACCTTGATCTTAAGAATCATCTGTCAGGCTTGCGCAAGGCATATTTAAAGCTATCATTTGACACAGTTCAAGAATTGATGAATGTGAAGAGTGAACTATTGCATGTTGTTGAAAGCAATTGGGCAAAGTCTGATGCTGCAGAAGCATATGATTCTATTTTATTTGGGAAAAGGGAACAAAAGCCTCAAGATTTTCTAGAATGCATTGTTGATCTTCGAGAGTATGATGTTCCTTACCATGTTCGTTTTGCTATTGATCATGATTTGCGCTGTGGACAATGGTACGATGTTAGTGTATCAAGCACTGGTGTTACACTTGAGAAGAGAAAAGATCTTCTGCAACGTGCTGAAGTTCACATATGTGCATTTGATATAGAGACCACAAAGCTACCATTAAAATTTCCAGATGCTGAATATGACATGATAATGATGATTTCCTACATGGTTGATGGACAAGGGTACTTGATTATCAACAGAGAGTGTGTTGGAGAAGATATTGAGAATTTGGAGTATACTCCAAAACCAGAATATGAAGGGTTCTTTAAAGTGACCAATGTGAAAAATGAGTTGGAGCTTCTCAAACTGTGGTTTGCCCATATGCGAGAGGTGAAACCTGGTATCTACGTCACCTACAATGGTGATTATTTTGACTGGCCATTCATTGAAAGCAGAGCAGCCTATCATGGATTTAAAATGAGTGATGAAGTAGGATTTCAATGTGACAAGAATCAGGGGGAATGCCGTTCAAAATTTGCTTGTCATTTGGATTGCTTTGCCTGGGTAAAGCGTGATAGTTATCTTCCTCAGGGTAGCCATGGTTTGAAGGCTGTCACAAAAGCTAAATTGGGTTATGATCCTCTTGAAGTGAATCCCGAGGATATGGTGCGGTTTGCAAAGGAAAAGCCTCAGATGATGGCTTCCTATTCTGTTTCAGATGCTGTTGCTACATACTACTTGTACATGACCTATGTTCACCCTTTCATCTTTTCTCTAGCAACCATTATTCCAATGTCACCAGATGAGGTGTTGCGCAAGGGAAGTGGGACCCTTTGTGAAATGCTTCTAATGGTTCAGGCTTACCAGGCTAATGTTGTGTGTCCGAACAAACATCAATCAGATCCAGAGAAGTTCTATAACAACCGGCTTCTTGAAAGTGAGACGTACATAGGTGGTCATGTAGAATGCCTGGAGAGTGGCGTATTTAGATCCGACCTTCCTACCAGTTTTAGGCTTGATCCATCTGCCTATGATCAATTGATAGACAATCTGGATCGAGATCTGCAGTATGCCATACAAGTAGAAGGAAAGATGGACTTGGAGTTGGTGTCAAATTATAGTGATGTGAAGAATGCTATTATGGAAAAGCTTATTAGGTTAAGGGATGAACCTGTACGTGAAGAGGGCCCTCTGATATATCACCTTGATGTAGCTGCGATGTATCCTAACATTATTTTAACAAATAGACTTCAGCCACCATCAATAGTTACAGATGAGGTTTGTACTGCTTGTGATTTCAATCGTCCTGGGAAAACTTGCCTACGAAAACTTGAATGGGTTTGGCGTGGAGAGGTATTCATGGCTAAGAAAAGTGACTATTATCATCTGAAGAAGCAAATTGAGTCTGAGTTTGTTGATAGCGGTAGTGTTCGGTTGTCAAAATCATTTCTTGAACTTCCAAAGTTGGAGCAACAGGCAAAGCTCAAAGAACGTCTAAAGAAATACTGTCAGAAGGCTTATAAACGAGTACTTGATAAGCCAGTCACTGAAGTTCGAGAAGCAGGGATCTGCATGAAAGAAAACTCTTTCTATATTGACACCGTTCGTAGTTTTCGAGATAGAAGGTATGAATACAAAGGGCTCAATAAAGTATGGAAAGGAAAATTATCAGAAGCTAAAGCGAGTGGAAATTCAATCAAGATCCAGGAAGCCCAAGACATGGTAGTTCTTTATGATTCTCTACAACTTGCTCATAAATGTATTCTCAACTCCTTTTATGGATATGTGATGCGAAAGGGTGCTCGATGGTACTCAATGGAAATGGCTGGGGTAGTTACATATACTGGAGCAAAAATCATTCAGAATGCTCGTCTATTAATTGAGAAAATTGGAAAACCATTGGAGTTAGACACTGATGGTATCTGGTGTGCACTACCTGGATCATTTCCAGAGAACTTTACCTTCAAAACAAAAGATTTGAAGAAGTTGACAATTTCATATCCATGTGTTATGCTTAATGTTGATGTGGCAAGGAACAACACAAATGACCAATACCAGACGCTTATAGATCCTGTGAAGAAAGAATACAAAACACATAGTGAATGCTCAATTGAATTTGAAGTAGATGGACCATACAAGGCAATGATTCTTCCTGCTTCCAAGGAAGAAGGCATTTTGATCAAGAAGAGATATGCTGTCTTCAATGATGATGGAACACTTGCGGAGCTAAAAGGCTTTGAGATTAAGCGTAGGGGGGAGTTGAAGCTCATCAAAGTTTTCCAGGCTGAACTTTTTGACAAGTTTCTTCATGGTTCCACCTTAGAAGAATGCTATTCAGTTGTTGCATCTGTTGCAAATCGCTGGCTAGATCTTCTAGATAATCAAGGAAAAGATATTGCAGATAGTGAGTTGCTTGATTATATATCTGAATCCAGTACCATGAGCAAATCTTTGGCAGATTATGGGGAGCAGAAGTCTTGTGCTGTTACCACTGCTAGACGTCTTGCAGATTTCCTTGGTGATACAATGGTCAGGGATAAAGGCCTACGTTGCCAATACATAGTTGCATGTGAACCTAAGGGAACACCTGTAAGTGAGCGTGCTGTTCCAGTTGCAATCTTTGAGACTGATTCAGAGATTATGAAATTTTATGTACGTAAATGGTGCAAGATTTCATCTGAAGTCGGCATCCGATCCATCATTGACTGGTCCTACTACAAGCAACGTCTAAGCTCAGCCATTCAAAAAATTATAACAATTCCCGCGGCCATGCAAAAGGTTGCAAATCCTGTTCCTAGGGTGGTCCATCCCGATTGGTTACATAAGAAAGTTCGTGAGAAGGATGATAAATTTCGCCAACAGAAAGTAGCTGATATGTTTGCATCCTCAAACAGAGGTAAATATTCAAAGAAGAATAGTGATGTCAGCTGCAGCAAACATGTGATGAATGAAGATAATTCTGGAGATATAGAAGATTTTCAAAAGAAAACAAGTTCTACAAGTGGCCCCAAACCAGTTGCCCGATGTTATGATGTCAGAGGCATGAAACATTCAGTCACAAGCGATAGCGAAATAAAATCCATGATGCAGGAGAATTTTAATGATGGAGGATGTGAGCCTTCTTCACCCTTGCATGTTGAAAACATTGACCAAAATGTCGATTACAATGGATGGCTTGAAATGAAGAAGCGGAAGTGGAAGAATACTTTGGACAAGAGGAAGAAGCAAAGGTTGGTAAGTTTAAAGACTCCACGTGCTGCTAATGATGTTACACGGGAGTTAAATAGTGCCGTGAATAATAAGGAGGCTCCTAAAACAGGTGTTGGTTCATATTTTAAGAGGCATGAAGGATCTATAACACGTTGCCATTGGCAGATTTTACAGCTTGTTCATAGTGCACAGAGTGGCCAATATTTTGCTTGGGCTGTTGTTGAAGGAGTGATGCTAAAGATTCCTATTACTATTCCCAGAGTTTTTTACCTTAATTCTAAAGTACCTATTACAGATGAATTTGTGGGTAGGCGTGTTAACAAAACTCTTCCCCATGGAAGGCACAGCCATAACCTGTATGAGGTTGTGACTGATGAAGGTCAATTTAGGACACAGAGGAATAAACTTGCAGCCCTCCTTGCAGATCCAGAAGTAGAGGGAATCTACGAAAGCAAGGTACCATTGGAGTTCAAGTCCATCTTTCAAATTGGTTGTGTCTGTAAAGTTGATAAAACTGCTAAAAAACGAAACATTCAAGACGGATGGAGTCTGGATGAACTGCAAATGAAGACTACAACAGAATGCAGTTATCTGGAAAAGCCAATCTCCTTCTTCTATGTGTATCATAGCATTTCTGAAGGAAGAGCTATCTACATTACTTATTTTCCCTCCACAAGATCAATACATGTGGTGGTGGTTAGTCCATACCAAAACAAAGACTTGTCATCAACTTTTCTTGAAAGGCAATTTCGTGAAGCTTGTCAAATAGTGTCTGGTGAATCACAACCTCTTAAGTGTGGTATAACTTGCAAGGTTGACTATGTTGTTAACATTAAAGAAGCTGAAGTGATTTTGCCAAGATCGATAATAGAACACAGGAGCATAAATCATGGACCTATTGTAGCTGTAATTCAATGCCCAAATGTGCAACTGCTGAAGTCAGGTGTTAGAGCATTAGATGATTTTCCATGCGTGAGCATTCCTTCTAATGCTCGTGATAGCCAATATCAGGTTCTTGGTTGGCAACAAACAGCTGCAAAGATTGGAATGCAACGCTGTGCTGCATCATCCCATTGGTTGAATGAGAGAATCTCTCTTGCAAGATATGCCCATGTACCATTAGGAAATTTTGAACTTGATTGGCTAATTTTTACAGCAGATATATTTTTTTCAAGAGCGTTACATGATCAACAGCAGGTACTTTGGGTATCGGATGATGGTGTTCCAGACATAGGAGGCATTAACATGGAAGACATATGTTTCGTGGATGAGGTTGAACAACGTGTTCTGAAGTACCCTGGAGCATATAGAAAAGTTTCCGTGGAGCTGAAGATCCATCATTTGGCTGTCAATGCTCTGTTGAAGAGCAACCAAGTGAATGAAATGGAAGGAGGTAGTTTGTTTGGCTTTGAACGTGATATGCAATGTGGGGGCCAACTCTCCAATGAAGAAGGTAGCTTCGATGAGGCTTCGTCTGCGCCAGCATTTCGCATCCTGAAACAATTGATACAAAGGTGTCTTGCAGATGCAGTTACATCTGGAAATGTATATGCTGATGCAATTTTGCAGCATCTGTACCGATGGATTTGCAGCCCCCAATCAAAACTTCATGACCCAGCTCTTCATCGCTTGCTCCACAAGGTTATGCAAAAGGTGTTTGCTCTTTTGTTGGCTGAACTACGCAAATTAGGGGCCACCATTATATTTGCAAACTTCTCAAAAATTATTATAGGCACGGGAAAGTTTGATCTCTCTGCTGCTAAAGCATACTGTGATAGCTTGCTGAAAACAGTGCAAACAAGGGATCTGTTTGAGTGGATTGAGCTGGAACCATTGCAATTCTGGCACTCCCTGTTGTTTATGGATCAGTATAACTATGGTGGAATCCCAGCAAAGGACGATGAAAGCACAGATGTTGAATCTCAAGTTGACATAGTGGCCAACTGGAACATTGCCGAATATCTACCCAAGAAGATTCAGGATCACTTTGTTTTTATCATCTCTCAATTTTTGTATATACCATGGAATTATGCAACCAAGCAAGCTGCAGAAAGAGCAACATTGCAGCGTGGTGACACATGTACCCCATCCATTACTGTTGTAGCCGCTGAATTGTTTGAATCACATGTGACCGAACATCTCAAAGAACAGCTAAGCTCTTACTTCAGCGACAAACTGCTGGGAATTGTGCGTGATATTGTTCTTCATATGAAAGGGATGGACAAGAACGCCCAGGATATTTTACCAGAACAACCTTCTAGTAATATCCACAAAGGAGATGCTGCATTGGAATTTATTAAGCACGTCTGCGCTGTTTTGGCCCTCGATCAAAATGTCCAGCATGATGTTCTGGTAATGAGGAAGAATTTACTGAAGTATGTACGTGTAAGAGAGTTTGCACCAGAAGCTGAGTTTTCTGATCCCTGCTCGTCCATAATCTTACCCAACGTTATTTGCAGCTACTGCGACGATTGTCGAGATTTGGACTTGTGTCGCGACTCGGCTTTATTAGCACAGGAATGGCGTTGTGCTGTGCCACAATGTGGACAACCATACAACCATGAAGTGATGGAGAACGCTCTGCTTCAAATCGTGCGGCAGAGGGAGCGCCTCTATCACGTACAGGATCTGGTTTGCGATCGCTGCAAGCAAGTCAAAGCAGCTCATTTGTCAGAACTTTGTGATTGTGCTGGCACATTTAAATGCAAAGAAGATGCGAAATTATTTTCCAGCAAGATGCAGCTTTTCCTCAACATAGCCATTCGTCAAAATTTTCAACTGTTGCAAGAGCTCACCTCGTGGATATTAGAATTCTCATAG | 6615 | 41.06 | MSGESRRRGRADKTRSKKQRVIRSAEEEIESKLGFDLFSEGDKRLGWLLTFAPSSLEDQDTGKVYSCVDLYFVAQDGSSFKSKYKFRPYIYAATKDKMGTDVEAYLRRRYERQIADIEILEKEDLDLKNHLSGLRKAYLKLSFDTVQELMNVKSELLHVVESNWAKSDAAEAYDSILFGKREQKPQDFLECIVDLREYDVPYHVRFAIDHDLRCGQWYDVSVSSTGVTLEKRKDLLQRAEVHICAFDIETTKLPLKFPDAEYDMIMMISYMVDGQGYLIINRECVGEDIENLEYTPKPEYEGFFKVTNVKNELELLKLWFAHMREVKPGIYVTYNGDYFDWPFIESRAAYHGFKMSDEVGFQCDKNQGECRSKFACHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYQANVVCPNKHQSDPEKFYNNRLLESETYIGGHVECLESGVFRSDLPTSFRLDPSAYDQLIDNLDRDLQYAIQVEGKMDLELVSNYSDVKNAIMEKLIRLRDEPVREEGPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEVFMAKKSDYYHLKKQIESEFVDSGSVRLSKSFLELPKLEQQAKLKERLKKYCQKAYKRVLDKPVTEVREAGICMKENSFYIDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCALPGSFPENFTFKTKDLKKLTISYPCVMLNVDVARNNTNDQYQTLIDPVKKEYKTHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTLEECYSVVASVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLADYGEQKSCAVTTARRLADFLGDTMVRDKGLRCQYIVACEPKGTPVSERAVPVAIFETDSEIMKFYVRKWCKISSEVGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKVREKDDKFRQQKVADMFASSNRGKYSKKNSDVSCSKHVMNEDNSGDIEDFQKKTSSTSGPKPVARCYDVRGMKHSVTSDSEIKSMMQENFNDGGCEPSSPLHVENIDQNVDYNGWLEMKKRKWKNTLDKRKKQRLVSLKTPRAANDVTRELNSAVNNKEAPKTGVGSYFKRHEGSITRCHWQILQLVHSAQSGQYFAWAVVEGVMLKIPITIPRVFYLNSKVPITDEFVGRRVNKTLPHGRHSHNLYEVVTDEGQFRTQRNKLAALLADPEVEGIYESKVPLEFKSIFQIGCVCKVDKTAKKRNIQDGWSLDELQMKTTTECSYLEKPISFFYVYHSISEGRAIYITYFPSTRSIHVVVVSPYQNKDLSSTFLERQFREACQIVSGESQPLKCGITCKVDYVVNIKEAEVILPRSIIEHRSINHGPIVAVIQCPNVQLLKSGVRALDDFPCVSIPSNARDSQYQVLGWQQTAAKIGMQRCAASSHWLNERISLARYAHVPLGNFELDWLIFTADIFFSRALHDQQQVLWVSDDGVPDIGGINMEDICFVDEVEQRVLKYPGAYRKVSVELKIHHLAVNALLKSNQVNEMEGGSLFGFERDMQCGGQLSNEEGSFDEASSAPAFRILKQLIQRCLADAVTSGNVYADAILQHLYRWICSPQSKLHDPALHRLLHKVMQKVFALLLAELRKLGATIIFANFSKIIIGTGKFDLSAAKAYCDSLLKTVQTRDLFEWIELEPLQFWHSLLFMDQYNYGGIPAKDDESTDVESQVDIVANWNIAEYLPKKIQDHFVFIISQFLYIPWNYATKQAAERATLQRGDTCTPSITVVAAELFESHVTEHLKEQLSSYFSDKLLGIVRDIVLHMKGMDKNAQDILPEQPSSNIHKGDAALEFIKHVCAVLALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFSDPCSSIILPNVICSYCDDCRDLDLCRDSALLAQEWRCAVPQCGQPYNHEVMENALLQIVRQRERLYHVQDLVCDRCKQVKAAHLSELCDCAGTFKCKEDAKLFSSKMQLFLNIAIRQNFQLLQELTSWILEFS | 2204 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 1077891 | 1113381 | - | Tan0014603.1 | Tan05g0138 | 751446 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan05g0138 | 2204 | Gene3D | - | 940 | 1124 | IPR042087 | - | |
| Tan05g0138 | 2204 | Gene3D | Palm domain of DNA polymerase | 752 | 936 | IPR023211 | - | |
| Tan05g0138 | 2204 | PANTHER | DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A | 3 | 2171 | IPR029703 | GO:0000278(PANTHER)|GO:0003677(PANTHER)|GO:0003677(InterPro)|GO:0003887(PANTHER)|GO:0003887(InterPro)|GO:0006260(InterPro)|GO:0006272(PANTHER)|GO:0006281(InterPro)|GO:0006287(PANTHER)|GO:0006297(PANTHER)|GO:0008310(PANTHER)|GO:0008622(PANTHER)|GO:0008622(InterPro)|GO:0045004(PANTHER) | |
| Tan05g0138 | 2204 | FunFam | DNA polymerase epsilon catalytic subunit | 940 | 1124 | - | - | |
| Tan05g0138 | 2204 | FunFam | DNA polymerase epsilon catalytic subunit | 723 | 798 | - | - | |
| Tan05g0138 | 2204 | MobiDBLite | consensus disorder prediction | 1167 | 1187 | - | - | |
| Tan05g0138 | 2204 | CDD | POLBc_epsilon | 503 | 1121 | - | - | |
| Tan05g0138 | 2204 | Pfam | Zinc finger domain of DNA polymerase-epsilon | 2139 | 2201 | IPR054475 | - | |
| Tan05g0138 | 2204 | FunFam | DNA polymerase epsilon catalytic subunit | 756 | 936 | - | - | |
| Tan05g0138 | 2204 | Gene3D | - | 238 | 468 | IPR036397 | GO:0003676(InterPro) | |
| Tan05g0138 | 2204 | Pfam | Domain of unknown function (DUF1744) | 1530 | 1894 | IPR013697 | GO:0003887(InterPro)|GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0008270(InterPro) | |
| Tan05g0138 | 2204 | CDD | DNA_polB_epsilon_exo | 240 | 444 | - | - | |
| Tan05g0138 | 2204 | Pfam | DNA polymerase family B, exonuclease domain | 194 | 400 | IPR006133 | - | |
| Tan05g0138 | 2204 | FunFam | DNA polymerase epsilon catalytic subunit | 56 | 227 | - | - | |
| Tan05g0138 | 2204 | SUPERFAMILY | DNA/RNA polymerases | 486 | 1114 | IPR043502 | - | |
| Tan05g0138 | 2204 | FunFam | DNA polymerase epsilon catalytic subunit | 240 | 468 | - | - | |
| Tan05g0138 | 2204 | Pfam | DNA polymerase epsilon catalytic subunit A, thumb domain | 945 | 1120 | - | - | |
| Tan05g0138 | 2204 | SMART | polmehr3 | 239 | 842 | IPR006172 | GO:0000166(InterPro)|GO:0003676(InterPro)|GO:0003887(InterPro) | |
| Tan05g0138 | 2204 | SMART | DUF1744_2 | 1510 | 1894 | IPR013697 | GO:0003887(InterPro)|GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0008270(InterPro) | |
| Tan05g0138 | 2204 | MobiDBLite | consensus disorder prediction | 1157 | 1202 | - | - | |
| Tan05g0138 | 2204 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Tan05g0138 | 2204 | SUPERFAMILY | Ribonuclease H-like | 66 | 467 | IPR012337 | - | |
| Tan05g0138 | 2204 | Gene3D | DNA Polymerase, chain B, domain 1 | 56 | 233 | - | - |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan05g0138 | K02324 | - | - | csv:101208568 | 4106.6 |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan05g0138 | Tan-Chr5:1077891 | Tan05g2135 | Tan-Chr5:72054809 | 0.00E+00 | dispersed |
Deco-Alignment
| Select | Vvi1 | Blo1 | Blo2 | Bda1 | Bda2 | Bpe1 | Bpe2 | Bma1 | Bma2 | Cmo1 | Cmo2 | Cma1 | Cma2 | Car1 | Car2 | Sed1 | Cpe1 | Cpe2 | Bhi1 | Tan1 | Cmetu1 | Lac1 | Hepe1 | Mch1 | Lcy1 | Cla1 | Cam1 | Cec1 | Cco1 | Clacu1 | Cmu1 | Cre1 | Cone1 | Cone2 | Cone3 | Cone4 | Lsi1 | Csa1 | Chy1 | Cme1 | Blo3 | Blo4 | Bda3 | Bda4 | Bpe3 | Bpe4 | Bma3 | Bma4 | Sed2 | Cmo3 | Cmo4 | Cma3 | Cma4 | Car3 | Car4 | Cpe3 | Cpe4 | Bhi2 | Tan2 | Cmetu2 | Lac2 | Hepe2 | Mch2 | Lcy2 | Cla2 | Cam2 | Cec2 | Cco2 | Clacu2 | Cmu2 | Cre2 | Lsi2 | Csa2 | Chy2 | Cme2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vvi6g1182 | . | . | Bda02g00714 | . | Bpe01g00239 | . | . | . | . | . | . | . | . | . | . | Cpe05g00419 | . | . | . | . | . | . | . | . | Cla02g02143 | Cam02g2276 | Cec02g2314 | Cco02g2358 | Clacu02g2254 | Cmu02g2187 | Cre02g2512 | . | . | . | . | . | Csa06g01291 | Chy11g00894 | . | . | Blo14g00223 | . | . | . | . | . | Bma11g00219 | Sed05g1215 | Cmo02g01374 | . | Cma02g01335 | . | Car02g01122 | . | . | . | Bhi10g00063 | Tan05g0138 | Cmetu11g2291 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Syn-Families
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Tan10g2129 | . | 106 | 798 | Core DNA Replication Machinery Family | AT4G14700 | 67.5 | 7.6e-274 | 940.6 | |
| Tan10g2131 | . | 140 | 832 | Core DNA Replication Machinery Family | AT4G14700 | 67.5 | 7.6e-274 | 940.6 | |
| Tan10g2130 | . | 106 | 757 | Core DNA Replication Machinery Family | AT4G14700 | 63.3 | 5.0e-249 | 858.2 | |
| Tan10g2129 | . | 73 | 798 | Core DNA Replication Machinery Family | AT4G12620 | 68.2 | 1.8e-283 | 972.6 | |
| Tan10g2131 | . | 107 | 832 | Core DNA Replication Machinery Family | AT4G12620 | 68.2 | 1.8e-283 | 972.6 | |
| Tan10g2130 | . | 73 | 757 | Core DNA Replication Machinery Family | AT4G12620 | 64.2 | 9.1e-259 | 890.6 | |
| Tan02g1876 | . | 2 | 362 | Core DNA Replication Machinery Family | AT2G37560 | 65.7 | 1.9e-141 | 499.6 | |
| Tan02g1877 | . | 1 | 277 | Core DNA Replication Machinery Family | AT2G37560 | 66.1 | 1.3e-108 | 390.6 | |
| Tan04g1369 | . | 9 | 418 | Core DNA Replication Machinery Family | AT2G01120 | 65.5 | 1.7e-155 | 546.6 | |
| Tan04g1370 | . | 9 | 418 | Core DNA Replication Machinery Family | AT2G01120 | 65.5 | 1.7e-155 | 546.6 | |
| Tan04g1371 | . | 9 | 418 | Core DNA Replication Machinery Family | AT2G01120 | 65.5 | 1.7e-155 | 546.6 | |
| Tan04g1373 | . | 9 | 418 | Core DNA Replication Machinery Family | AT2G01120 | 65.5 | 1.7e-155 | 546.6 | |
| Tan04g1374 | . | 9 | 362 | Core DNA Replication Machinery Family | AT2G01120 | 66.8 | 4.3e-135 | 478.8 | |
| Tan04g1372 | . | 2 | 351 | Core DNA Replication Machinery Family | AT2G01120 | 65.5 | 4.9e-131 | 465.3 | |
| Tan04g1375 | . | 9 | 382 | Core DNA Replication Machinery Family | AT2G01120 | 58.0 | 3.2e-130 | 462.6 | |
| Tan06g2023 | . | 3 | 536 | Core DNA Replication Machinery Family | AT4G29910 | 58.6 | 1.9e-175 | 613.2 | |
| Tan06g2024 | . | 3 | 536 | Core DNA Replication Machinery Family | AT4G29910 | 58.6 | 1.9e-175 | 613.2 | |
| Tan06g2025 | . | 3 | 536 | Core DNA Replication Machinery Family | AT4G29910 | 58.6 | 1.9e-175 | 613.2 | |
| Tan06g2026 | . | 3 | 536 | Core DNA Replication Machinery Family | AT4G29910 | 58.6 | 1.9e-175 | 613.2 | |
| Tan08g0428 | . | 50 | 333 | Core DNA Replication Machinery Family | AT1G26840 | 62.8 | 5.5e-94 | 341.7 | |
| Tan08g0893 | . | 1 | 282 | Core DNA Replication Machinery Family | AT1G26840 | 63.7 | 6.1e-93 | 338.2 | |
| Tan08g0895 | . | 1 | 282 | Core DNA Replication Machinery Family | AT1G26840 | 63.7 | 6.1e-93 | 338.2 | |
| Tan08g0429 | . | 50 | 311 | Core DNA Replication Machinery Family | AT1G26840 | 61.8 | 3.9e-84 | 308.9 | |
| Tan08g0894 | . | 1 | 211 | Core DNA Replication Machinery Family | AT1G26840 | 62.0 | 4.5e-64 | 242.3 | |
| Tan02g0055 | . | 1 | 798 | Core DNA Replication Machinery Family | AT1G79150 | 59.3 | 3.0e-249 | 859.0 | |
| Tan10g1476 | . | 1 | 939 | Core DNA Replication Machinery Family | AT1G44900 | 75.0 | 0.0e+00 | 1345.5 | |
| Tan03g2685 | . | 1 | 575 | Core DNA Replication Machinery Family | AT5G46280 | 80.7 | 8.3e-267 | 916.8 | |
| Tan02g0770 | . | 1 | 845 | Core DNA Replication Machinery Family | AT2G16440 | 75.8 | 0.0e+00 | 1174.5 | |
| Tan08g0333 | . | 974 | 1708 | Core DNA Replication Machinery Family | AT2G07690 | 78.0 | 0.0e+00 | 1109.7 | |
| Tan03g2893 | . | 7 | 821 | Core DNA Replication Machinery Family | AT5G44635 | 72.2 | 0.0e+00 | 1181.8 | |
| Tan06g0728 | . | 11 | 722 | Core DNA Replication Machinery Family | AT4G02060 | 85.1 | 0.0e+00 | 1210.3 | |
| Tan05g0459 | . | 43 | 468 | Core DNA Replication Machinery Family | AT2G29680 | 62.2 | 7.9e-152 | 534.6 | |
| Tan05g0460 | . | 43 | 468 | Core DNA Replication Machinery Family | AT2G29680 | 62.2 | 7.9e-152 | 534.6 | |
| Tan11g0836 | . | 32 | 441 | Core DNA Replication Machinery Family | AT2G29680 | 62.4 | 9.0e-148 | 521.2 | |
| Tan11g0837 | . | 32 | 441 | Core DNA Replication Machinery Family | AT2G29680 | 62.4 | 9.0e-148 | 521.2 | |
| Tan11g0838 | . | 32 | 441 | Core DNA Replication Machinery Family | AT2G29680 | 62.4 | 9.0e-148 | 521.2 | |
| Tan11g0840 | . | 32 | 441 | Core DNA Replication Machinery Family | AT2G29680 | 62.4 | 9.0e-148 | 521.2 | |
| Tan11g0843 | . | 32 | 441 | Core DNA Replication Machinery Family | AT2G29680 | 62.4 | 9.0e-148 | 521.2 | |
| Tan11g0839 | . | 32 | 434 | Core DNA Replication Machinery Family | AT2G29680 | 61.5 | 8.8e-143 | 504.6 | |
| Tan05g0461 | . | 43 | 431 | Core DNA Replication Machinery Family | AT2G29680 | 61.2 | 6.7e-135 | 478.4 | |
| Tan11g0841 | . | 32 | 406 | Core DNA Replication Machinery Family | AT2G29680 | 61.3 | 2.6e-131 | 466.5 | |
| Tan11g0842 | . | 32 | 376 | Core DNA Replication Machinery Family | AT2G29680 | 60.9 | 8.8e-119 | 424.9 | |
| Tan05g0461 | . | 52 | 430 | Core DNA Replication Machinery Family | AT1G07270 | 64.1 | 3.0e-137 | 486.1 | |
| Tan05g0459 | . | 52 | 429 | Core DNA Replication Machinery Family | AT1G07270 | 64.0 | 8.7e-137 | 484.6 | |
| Tan05g0460 | . | 52 | 429 | Core DNA Replication Machinery Family | AT1G07270 | 64.0 | 8.7e-137 | 484.6 | |
| Tan11g0841 | . | 32 | 403 | Core DNA Replication Machinery Family | AT1G07270 | 63.4 | 6.5e-132 | 468.4 | |
| Tan11g0836 | . | 32 | 402 | Core DNA Replication Machinery Family | AT1G07270 | 63.3 | 1.9e-131 | 466.8 | |
| Tan11g0837 | . | 32 | 402 | Core DNA Replication Machinery Family | AT1G07270 | 63.3 | 1.9e-131 | 466.8 | |
| Tan11g0838 | . | 32 | 402 | Core DNA Replication Machinery Family | AT1G07270 | 63.3 | 1.9e-131 | 466.8 | |
| Tan11g0839 | . | 32 | 402 | Core DNA Replication Machinery Family | AT1G07270 | 63.3 | 1.9e-131 | 466.8 | |
| Tan11g0840 | . | 32 | 402 | Core DNA Replication Machinery Family | AT1G07270 | 63.3 | 1.9e-131 | 466.8 | |
| Tan11g0843 | . | 32 | 402 | Core DNA Replication Machinery Family | AT1G07270 | 63.3 | 1.9e-131 | 466.8 | |
| Tan11g0842 | . | 32 | 376 | Core DNA Replication Machinery Family | AT1G07270 | 62.9 | 4.3e-120 | 429.1 | |
| Tan06g1260 | . | 1 | 593 | Core DNA Replication Machinery Family | AT3G25100 | 77.3 | 2.7e-260 | 895.2 | |
| Tan08g1920 | . | 26 | 792 | Core DNA Replication Machinery Family | AT3G09660 | 75.6 | 0.0e+00 | 1128.2 | |
| Tan08g1921 | . | 9 | 661 | Core DNA Replication Machinery Family | AT3G09660 | 80.3 | 7.5e-298 | 1020.4 | |
| Tan02g1195 | . | 16 | 645 | Core DNA Replication Machinery Family | AT2G14050 | 78.5 | 1.3e-289 | 992.6 | |
| Tan02g1194 | . | 16 | 642 | Core DNA Replication Machinery Family | AT2G14050 | 78.4 | 2.2e-287 | 985.3 | |
| Tan05g1140 | . | 1 | 411 | Core DNA Replication Machinery Family | AT2G20980 | 55.9 | 9.0e-119 | 424.5 | |
| Tan05g1141 | . | 1 | 333 | Core DNA Replication Machinery Family | AT2G20980 | 60.4 | 8.1e-112 | 401.4 | |
| Tan01g4061 | . | 7 | 968 | Core DNA Replication Machinery Family | AT1G77320 | 50.8 | 2.8e-262 | 902.5 | |
| Tan06g0389 | . | 1 | 197 | Core DNA Replication Machinery Family | AT1G80190 | 67.0 | 5.9e-74 | 274.6 | |
| Tan06g0390 | . | 1 | 197 | Core DNA Replication Machinery Family | AT1G80190 | 67.0 | 5.9e-74 | 274.6 | |
| Tan01g0535 | . | 1 | 145 | Core DNA Replication Machinery Family | AT3G12530 | 72.4 | 1.2e-60 | 229.9 | |
| Tan11g0277 | . | 1 | 184 | Core DNA Replication Machinery Family | AT1G19080 | 61.4 | 2.2e-59 | 226.1 | |
| Tan11g0278 | . | 1 | 184 | Core DNA Replication Machinery Family | AT1G19080 | 61.4 | 2.2e-59 | 226.1 | |
| Tan11g0277 | . | 1 | 184 | Core DNA Replication Machinery Family | AT3G55490 | 61.4 | 2.2e-59 | 226.1 | |
| Tan11g0278 | . | 1 | 184 | Core DNA Replication Machinery Family | AT3G55490 | 61.4 | 2.2e-59 | 226.1 | |
| Tan10g0235 | . | 15 | 164 | Core DNA Replication Machinery Family | AT5G49010 | 66.0 | 3.3e-50 | 195.7 | |
| Tan05g1616 | . | 1 | 1547 | Core DNA Replication Machinery Family | AT5G67100 | 60.2 | 0.0e+00 | 1758.8 | |
| Tan04g0094 | . | 2 | 622 | Core DNA Replication Machinery Family | AT1G67630 | 62.7 | 4.0e-222 | 768.5 | |
| Tan04g0095 | . | 2 | 590 | Core DNA Replication Machinery Family | AT1G67630 | 59.5 | 8.9e-206 | 714.1 | |
| Tan06g1509 | . | 1 | 447 | Core DNA Replication Machinery Family | AT1G67320 | 65.3 | 2.2e-183 | 639.4 | |
| Tan10g1855 | . | 1 | 450 | Core DNA Replication Machinery Family | AT5G41880 | 64.6 | 7.0e-176 | 614.4 | |
| Tan10g1856 | . | 117 | 566 | Core DNA Replication Machinery Family | AT5G41880 | 64.6 | 7.0e-176 | 614.4 | |
| Tan10g1857 | . | 1 | 450 | Core DNA Replication Machinery Family | AT5G41880 | 64.6 | 7.0e-176 | 614.4 | |
| Tan03g1272 | . | 1 | 1086 | Core DNA Replication Machinery Family | AT5G63960 | 80.7 | 0.0e+00 | 1800.4 | |
| Tan08g1499 | . | 1 | 438 | Core DNA Replication Machinery Family | AT2G42120 | 76.3 | 1.1e-205 | 713.4 | |
| Tan06g1509 | . | 1 | 447 | Core DNA Replication Machinery Family | AT1G67320 | 65.3 | 2.2e-183 | 639.4 | |
| Tan05g0138 | . | 1 | 2094 | Core DNA Replication Machinery Family | AT1G08260 | 71.6 | 0.0e+00 | 2974.1 | |
| Tan05g2135 | . | 1 | 1612 | Core DNA Replication Machinery Family | AT1G08260 | 66.1 | 0.0e+00 | 2120.5 | |
| Tan05g0138 | . | 9 | 2201 | Core DNA Replication Machinery Family | AT2G27120 | 67.8 | 0.0e+00 | 2936.7 | |
| Tan05g2135 | . | 1 | 1719 | Core DNA Replication Machinery Family | AT2G27120 | 63.7 | 0.0e+00 | 2141.7 | |
| Tan05g1723 | . | 7 | 486 | Core DNA Replication Machinery Family | AT5G22110 | 69.0 | 1.5e-192 | 669.8 | |
| Tan05g1724 | . | 7 | 486 | Core DNA Replication Machinery Family | AT5G22110 | 69.0 | 1.5e-192 | 669.8 | |
| Tan05g0066 | . | 1 | 926 | Core DNA Replication Machinery Family | AT5G22010 | 64.6 | 1.1e-305 | 1046.6 | |
| Tan01g1944 | . | 1 | 332 | Core DNA Replication Machinery Family | AT1G63160 | 90.4 | 1.6e-172 | 602.8 | |
| Tan03g0578 | . | 1 | 354 | Core DNA Replication Machinery Family | AT5G27740 | 86.4 | 1.6e-180 | 629.4 | |
| Tan03g0579 | . | 1 | 354 | Core DNA Replication Machinery Family | AT5G27740 | 86.4 | 1.6e-180 | 629.4 | |
| Tan03g0580 | . | 11 | 288 | Core DNA Replication Machinery Family | AT5G27740 | 88.1 | 8.3e-140 | 494.2 | |
| Tan03g0581 | . | 11 | 288 | Core DNA Replication Machinery Family | AT5G27740 | 88.1 | 8.3e-140 | 494.2 | |
| Tan01g4059 | . | 1 | 334 | Core DNA Replication Machinery Family | AT1G21690 | 81.2 | 8.8e-152 | 533.9 | |
| Tan11g1257 | . | 1 | 243 | Core DNA Replication Machinery Family | AT1G77470 | 77.4 | 5.6e-99 | 358.6 | |
| Tan08g0026 | . | 26 | 618 | Core DNA Replication Machinery Family | AT2G06510 | 68.5 | 8.2e-252 | 867.1 | |
| Tan01g2266 | . | 34 | 700 | Core DNA Replication Machinery Family | AT2G06510 | 50.7 | 7.8e-194 | 674.5 | |
| Tan09g2042 | . | 1 | 623 | Core DNA Replication Machinery Family | AT5G08020 | 67.6 | 4.2e-245 | 844.7 | |
| Tan01g2266 | . | 10 | 802 | Core DNA Replication Machinery Family | AT5G45400 | 51.3 | 5.5e-222 | 768.5 | |
| Tan09g2042 | . | 1 | 618 | Core DNA Replication Machinery Family | AT5G61000 | 65.3 | 3.1e-238 | 822.0 | |
| Tan01g2266 | . | 5 | 796 | Core DNA Replication Machinery Family | AT4G19130 | 52.6 | 5.7e-218 | 755.0 | |
| Tan09g0027 | . | 1 | 172 | Core DNA Replication Machinery Family | AT5G26680 | 90.7 | 1.2e-84 | 311.2 | |
| Tan09g0026 | . | 1 | 251 | Core DNA Replication Machinery Family | AT5G26680 | 62.3 | 6.9e-77 | 285.4 | |
| Tan10g0439 | . | 1 | 1113 | Core DNA Replication Machinery Family | AT1G08840 | 52.4 | 7.0e-296 | 1014.2 | |
| Tan10g1283 | . | 1 | 297 | Core DNA Replication Machinery Family | AT2G25100 | 66.7 | 1.0e-113 | 407.1 | |
| Tan05g0202 | . | 168 | 804 | Core DNA Replication Machinery Family | AT1G08130 | 77.6 | 9.0e-296 | 1013.4 | |
| Tan05g0202 | . | 204 | 804 | Core DNA Replication Machinery Family | AT1G49250 | 69.3 | 6.7e-244 | 840.9 |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0003287 | 1 | 3 | 1 | 1 | 1 | 2 | 1 | 2 | 2 | 1 | 2 | 2 | 1 | 2 | 1 | 1 | 3 | 1 | 1 | 2 | 1 | 1 | 2 | 2 | 2 | 2 | 2 | 4 | 2 | 1 | 50 |