Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0138 ATGAGCGGCGAAAGCCGAAGGCGAGGCCGCGCAGACAAGACTAGGTCGAAGAAGCAGAGGGTAATCCGGTCCGCCGAGGAGGAGATCGAATCAAAGCTTGGATTTGATCTCTTCTCTGAAGGCGATAAGAGGCTTGGATGGTTGCTCACATTCGCTCCTTCATCTTTGGAGGATCAGGATACCGGAAAGGTCTATAGCTGTGTTGATCTTTATTTTGTGGCACAGGATGGCAGCAGTTTCAAGTCAAAATATAAATTCCGTCCTTATATCTATGCAGCCACAAAGGATAAAATGGGAACTGATGTGGAGGCTTATTTGAGACGACGTTACGAACGTCAAATAGCTGATATCGAGATTTTAGAAAAGGAAGACCTTGATCTTAAGAATCATCTGTCAGGCTTGCGCAAGGCATATTTAAAGCTATCATTTGACACAGTTCAAGAATTGATGAATGTGAAGAGTGAACTATTGCATGTTGTTGAAAGCAATTGGGCAAAGTCTGATGCTGCAGAAGCATATGATTCTATTTTATTTGGGAAAAGGGAACAAAAGCCTCAAGATTTTCTAGAATGCATTGTTGATCTTCGAGAGTATGATGTTCCTTACCATGTTCGTTTTGCTATTGATCATGATTTGCGCTGTGGACAATGGTACGATGTTAGTGTATCAAGCACTGGTGTTACACTTGAGAAGAGAAAAGATCTTCTGCAACGTGCTGAAGTTCACATATGTGCATTTGATATAGAGACCACAAAGCTACCATTAAAATTTCCAGATGCTGAATATGACATGATAATGATGATTTCCTACATGGTTGATGGACAAGGGTACTTGATTATCAACAGAGAGTGTGTTGGAGAAGATATTGAGAATTTGGAGTATACTCCAAAACCAGAATATGAAGGGTTCTTTAAAGTGACCAATGTGAAAAATGAGTTGGAGCTTCTCAAACTGTGGTTTGCCCATATGCGAGAGGTGAAACCTGGTATCTACGTCACCTACAATGGTGATTATTTTGACTGGCCATTCATTGAAAGCAGAGCAGCCTATCATGGATTTAAAATGAGTGATGAAGTAGGATTTCAATGTGACAAGAATCAGGGGGAATGCCGTTCAAAATTTGCTTGTCATTTGGATTGCTTTGCCTGGGTAAAGCGTGATAGTTATCTTCCTCAGGGTAGCCATGGTTTGAAGGCTGTCACAAAAGCTAAATTGGGTTATGATCCTCTTGAAGTGAATCCCGAGGATATGGTGCGGTTTGCAAAGGAAAAGCCTCAGATGATGGCTTCCTATTCTGTTTCAGATGCTGTTGCTACATACTACTTGTACATGACCTATGTTCACCCTTTCATCTTTTCTCTAGCAACCATTATTCCAATGTCACCAGATGAGGTGTTGCGCAAGGGAAGTGGGACCCTTTGTGAAATGCTTCTAATGGTTCAGGCTTACCAGGCTAATGTTGTGTGTCCGAACAAACATCAATCAGATCCAGAGAAGTTCTATAACAACCGGCTTCTTGAAAGTGAGACGTACATAGGTGGTCATGTAGAATGCCTGGAGAGTGGCGTATTTAGATCCGACCTTCCTACCAGTTTTAGGCTTGATCCATCTGCCTATGATCAATTGATAGACAATCTGGATCGAGATCTGCAGTATGCCATACAAGTAGAAGGAAAGATGGACTTGGAGTTGGTGTCAAATTATAGTGATGTGAAGAATGCTATTATGGAAAAGCTTATTAGGTTAAGGGATGAACCTGTACGTGAAGAGGGCCCTCTGATATATCACCTTGATGTAGCTGCGATGTATCCTAACATTATTTTAACAAATAGACTTCAGCCACCATCAATAGTTACAGATGAGGTTTGTACTGCTTGTGATTTCAATCGTCCTGGGAAAACTTGCCTACGAAAACTTGAATGGGTTTGGCGTGGAGAGGTATTCATGGCTAAGAAAAGTGACTATTATCATCTGAAGAAGCAAATTGAGTCTGAGTTTGTTGATAGCGGTAGTGTTCGGTTGTCAAAATCATTTCTTGAACTTCCAAAGTTGGAGCAACAGGCAAAGCTCAAAGAACGTCTAAAGAAATACTGTCAGAAGGCTTATAAACGAGTACTTGATAAGCCAGTCACTGAAGTTCGAGAAGCAGGGATCTGCATGAAAGAAAACTCTTTCTATATTGACACCGTTCGTAGTTTTCGAGATAGAAGGTATGAATACAAAGGGCTCAATAAAGTATGGAAAGGAAAATTATCAGAAGCTAAAGCGAGTGGAAATTCAATCAAGATCCAGGAAGCCCAAGACATGGTAGTTCTTTATGATTCTCTACAACTTGCTCATAAATGTATTCTCAACTCCTTTTATGGATATGTGATGCGAAAGGGTGCTCGATGGTACTCAATGGAAATGGCTGGGGTAGTTACATATACTGGAGCAAAAATCATTCAGAATGCTCGTCTATTAATTGAGAAAATTGGAAAACCATTGGAGTTAGACACTGATGGTATCTGGTGTGCACTACCTGGATCATTTCCAGAGAACTTTACCTTCAAAACAAAAGATTTGAAGAAGTTGACAATTTCATATCCATGTGTTATGCTTAATGTTGATGTGGCAAGGAACAACACAAATGACCAATACCAGACGCTTATAGATCCTGTGAAGAAAGAATACAAAACACATAGTGAATGCTCAATTGAATTTGAAGTAGATGGACCATACAAGGCAATGATTCTTCCTGCTTCCAAGGAAGAAGGCATTTTGATCAAGAAGAGATATGCTGTCTTCAATGATGATGGAACACTTGCGGAGCTAAAAGGCTTTGAGATTAAGCGTAGGGGGGAGTTGAAGCTCATCAAAGTTTTCCAGGCTGAACTTTTTGACAAGTTTCTTCATGGTTCCACCTTAGAAGAATGCTATTCAGTTGTTGCATCTGTTGCAAATCGCTGGCTAGATCTTCTAGATAATCAAGGAAAAGATATTGCAGATAGTGAGTTGCTTGATTATATATCTGAATCCAGTACCATGAGCAAATCTTTGGCAGATTATGGGGAGCAGAAGTCTTGTGCTGTTACCACTGCTAGACGTCTTGCAGATTTCCTTGGTGATACAATGGTCAGGGATAAAGGCCTACGTTGCCAATACATAGTTGCATGTGAACCTAAGGGAACACCTGTAAGTGAGCGTGCTGTTCCAGTTGCAATCTTTGAGACTGATTCAGAGATTATGAAATTTTATGTACGTAAATGGTGCAAGATTTCATCTGAAGTCGGCATCCGATCCATCATTGACTGGTCCTACTACAAGCAACGTCTAAGCTCAGCCATTCAAAAAATTATAACAATTCCCGCGGCCATGCAAAAGGTTGCAAATCCTGTTCCTAGGGTGGTCCATCCCGATTGGTTACATAAGAAAGTTCGTGAGAAGGATGATAAATTTCGCCAACAGAAAGTAGCTGATATGTTTGCATCCTCAAACAGAGGTAAATATTCAAAGAAGAATAGTGATGTCAGCTGCAGCAAACATGTGATGAATGAAGATAATTCTGGAGATATAGAAGATTTTCAAAAGAAAACAAGTTCTACAAGTGGCCCCAAACCAGTTGCCCGATGTTATGATGTCAGAGGCATGAAACATTCAGTCACAAGCGATAGCGAAATAAAATCCATGATGCAGGAGAATTTTAATGATGGAGGATGTGAGCCTTCTTCACCCTTGCATGTTGAAAACATTGACCAAAATGTCGATTACAATGGATGGCTTGAAATGAAGAAGCGGAAGTGGAAGAATACTTTGGACAAGAGGAAGAAGCAAAGGTTGGTAAGTTTAAAGACTCCACGTGCTGCTAATGATGTTACACGGGAGTTAAATAGTGCCGTGAATAATAAGGAGGCTCCTAAAACAGGTGTTGGTTCATATTTTAAGAGGCATGAAGGATCTATAACACGTTGCCATTGGCAGATTTTACAGCTTGTTCATAGTGCACAGAGTGGCCAATATTTTGCTTGGGCTGTTGTTGAAGGAGTGATGCTAAAGATTCCTATTACTATTCCCAGAGTTTTTTACCTTAATTCTAAAGTACCTATTACAGATGAATTTGTGGGTAGGCGTGTTAACAAAACTCTTCCCCATGGAAGGCACAGCCATAACCTGTATGAGGTTGTGACTGATGAAGGTCAATTTAGGACACAGAGGAATAAACTTGCAGCCCTCCTTGCAGATCCAGAAGTAGAGGGAATCTACGAAAGCAAGGTACCATTGGAGTTCAAGTCCATCTTTCAAATTGGTTGTGTCTGTAAAGTTGATAAAACTGCTAAAAAACGAAACATTCAAGACGGATGGAGTCTGGATGAACTGCAAATGAAGACTACAACAGAATGCAGTTATCTGGAAAAGCCAATCTCCTTCTTCTATGTGTATCATAGCATTTCTGAAGGAAGAGCTATCTACATTACTTATTTTCCCTCCACAAGATCAATACATGTGGTGGTGGTTAGTCCATACCAAAACAAAGACTTGTCATCAACTTTTCTTGAAAGGCAATTTCGTGAAGCTTGTCAAATAGTGTCTGGTGAATCACAACCTCTTAAGTGTGGTATAACTTGCAAGGTTGACTATGTTGTTAACATTAAAGAAGCTGAAGTGATTTTGCCAAGATCGATAATAGAACACAGGAGCATAAATCATGGACCTATTGTAGCTGTAATTCAATGCCCAAATGTGCAACTGCTGAAGTCAGGTGTTAGAGCATTAGATGATTTTCCATGCGTGAGCATTCCTTCTAATGCTCGTGATAGCCAATATCAGGTTCTTGGTTGGCAACAAACAGCTGCAAAGATTGGAATGCAACGCTGTGCTGCATCATCCCATTGGTTGAATGAGAGAATCTCTCTTGCAAGATATGCCCATGTACCATTAGGAAATTTTGAACTTGATTGGCTAATTTTTACAGCAGATATATTTTTTTCAAGAGCGTTACATGATCAACAGCAGGTACTTTGGGTATCGGATGATGGTGTTCCAGACATAGGAGGCATTAACATGGAAGACATATGTTTCGTGGATGAGGTTGAACAACGTGTTCTGAAGTACCCTGGAGCATATAGAAAAGTTTCCGTGGAGCTGAAGATCCATCATTTGGCTGTCAATGCTCTGTTGAAGAGCAACCAAGTGAATGAAATGGAAGGAGGTAGTTTGTTTGGCTTTGAACGTGATATGCAATGTGGGGGCCAACTCTCCAATGAAGAAGGTAGCTTCGATGAGGCTTCGTCTGCGCCAGCATTTCGCATCCTGAAACAATTGATACAAAGGTGTCTTGCAGATGCAGTTACATCTGGAAATGTATATGCTGATGCAATTTTGCAGCATCTGTACCGATGGATTTGCAGCCCCCAATCAAAACTTCATGACCCAGCTCTTCATCGCTTGCTCCACAAGGTTATGCAAAAGGTGTTTGCTCTTTTGTTGGCTGAACTACGCAAATTAGGGGCCACCATTATATTTGCAAACTTCTCAAAAATTATTATAGGCACGGGAAAGTTTGATCTCTCTGCTGCTAAAGCATACTGTGATAGCTTGCTGAAAACAGTGCAAACAAGGGATCTGTTTGAGTGGATTGAGCTGGAACCATTGCAATTCTGGCACTCCCTGTTGTTTATGGATCAGTATAACTATGGTGGAATCCCAGCAAAGGACGATGAAAGCACAGATGTTGAATCTCAAGTTGACATAGTGGCCAACTGGAACATTGCCGAATATCTACCCAAGAAGATTCAGGATCACTTTGTTTTTATCATCTCTCAATTTTTGTATATACCATGGAATTATGCAACCAAGCAAGCTGCAGAAAGAGCAACATTGCAGCGTGGTGACACATGTACCCCATCCATTACTGTTGTAGCCGCTGAATTGTTTGAATCACATGTGACCGAACATCTCAAAGAACAGCTAAGCTCTTACTTCAGCGACAAACTGCTGGGAATTGTGCGTGATATTGTTCTTCATATGAAAGGGATGGACAAGAACGCCCAGGATATTTTACCAGAACAACCTTCTAGTAATATCCACAAAGGAGATGCTGCATTGGAATTTATTAAGCACGTCTGCGCTGTTTTGGCCCTCGATCAAAATGTCCAGCATGATGTTCTGGTAATGAGGAAGAATTTACTGAAGTATGTACGTGTAAGAGAGTTTGCACCAGAAGCTGAGTTTTCTGATCCCTGCTCGTCCATAATCTTACCCAACGTTATTTGCAGCTACTGCGACGATTGTCGAGATTTGGACTTGTGTCGCGACTCGGCTTTATTAGCACAGGAATGGCGTTGTGCTGTGCCACAATGTGGACAACCATACAACCATGAAGTGATGGAGAACGCTCTGCTTCAAATCGTGCGGCAGAGGGAGCGCCTCTATCACGTACAGGATCTGGTTTGCGATCGCTGCAAGCAAGTCAAAGCAGCTCATTTGTCAGAACTTTGTGATTGTGCTGGCACATTTAAATGCAAAGAAGATGCGAAATTATTTTCCAGCAAGATGCAGCTTTTCCTCAACATAGCCATTCGTCAAAATTTTCAACTGTTGCAAGAGCTCACCTCGTGGATATTAGAATTCTCATAG 6615 41.06 MSGESRRRGRADKTRSKKQRVIRSAEEEIESKLGFDLFSEGDKRLGWLLTFAPSSLEDQDTGKVYSCVDLYFVAQDGSSFKSKYKFRPYIYAATKDKMGTDVEAYLRRRYERQIADIEILEKEDLDLKNHLSGLRKAYLKLSFDTVQELMNVKSELLHVVESNWAKSDAAEAYDSILFGKREQKPQDFLECIVDLREYDVPYHVRFAIDHDLRCGQWYDVSVSSTGVTLEKRKDLLQRAEVHICAFDIETTKLPLKFPDAEYDMIMMISYMVDGQGYLIINRECVGEDIENLEYTPKPEYEGFFKVTNVKNELELLKLWFAHMREVKPGIYVTYNGDYFDWPFIESRAAYHGFKMSDEVGFQCDKNQGECRSKFACHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYQANVVCPNKHQSDPEKFYNNRLLESETYIGGHVECLESGVFRSDLPTSFRLDPSAYDQLIDNLDRDLQYAIQVEGKMDLELVSNYSDVKNAIMEKLIRLRDEPVREEGPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEVFMAKKSDYYHLKKQIESEFVDSGSVRLSKSFLELPKLEQQAKLKERLKKYCQKAYKRVLDKPVTEVREAGICMKENSFYIDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCALPGSFPENFTFKTKDLKKLTISYPCVMLNVDVARNNTNDQYQTLIDPVKKEYKTHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTLEECYSVVASVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLADYGEQKSCAVTTARRLADFLGDTMVRDKGLRCQYIVACEPKGTPVSERAVPVAIFETDSEIMKFYVRKWCKISSEVGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKVREKDDKFRQQKVADMFASSNRGKYSKKNSDVSCSKHVMNEDNSGDIEDFQKKTSSTSGPKPVARCYDVRGMKHSVTSDSEIKSMMQENFNDGGCEPSSPLHVENIDQNVDYNGWLEMKKRKWKNTLDKRKKQRLVSLKTPRAANDVTRELNSAVNNKEAPKTGVGSYFKRHEGSITRCHWQILQLVHSAQSGQYFAWAVVEGVMLKIPITIPRVFYLNSKVPITDEFVGRRVNKTLPHGRHSHNLYEVVTDEGQFRTQRNKLAALLADPEVEGIYESKVPLEFKSIFQIGCVCKVDKTAKKRNIQDGWSLDELQMKTTTECSYLEKPISFFYVYHSISEGRAIYITYFPSTRSIHVVVVSPYQNKDLSSTFLERQFREACQIVSGESQPLKCGITCKVDYVVNIKEAEVILPRSIIEHRSINHGPIVAVIQCPNVQLLKSGVRALDDFPCVSIPSNARDSQYQVLGWQQTAAKIGMQRCAASSHWLNERISLARYAHVPLGNFELDWLIFTADIFFSRALHDQQQVLWVSDDGVPDIGGINMEDICFVDEVEQRVLKYPGAYRKVSVELKIHHLAVNALLKSNQVNEMEGGSLFGFERDMQCGGQLSNEEGSFDEASSAPAFRILKQLIQRCLADAVTSGNVYADAILQHLYRWICSPQSKLHDPALHRLLHKVMQKVFALLLAELRKLGATIIFANFSKIIIGTGKFDLSAAKAYCDSLLKTVQTRDLFEWIELEPLQFWHSLLFMDQYNYGGIPAKDDESTDVESQVDIVANWNIAEYLPKKIQDHFVFIISQFLYIPWNYATKQAAERATLQRGDTCTPSITVVAAELFESHVTEHLKEQLSSYFSDKLLGIVRDIVLHMKGMDKNAQDILPEQPSSNIHKGDAALEFIKHVCAVLALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFSDPCSSIILPNVICSYCDDCRDLDLCRDSALLAQEWRCAVPQCGQPYNHEVMENALLQIVRQRERLYHVQDLVCDRCKQVKAAHLSELCDCAGTFKCKEDAKLFSSKMQLFLNIAIRQNFQLLQELTSWILEFS 2204
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1077891 1113381 - Tan0014603.1 Tan05g0138 751446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0138 2204 Gene3D - 940 1124 IPR042087 -
Tan05g0138 2204 Gene3D Palm domain of DNA polymerase 752 936 IPR023211 -
Tan05g0138 2204 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 3 2171 IPR029703 GO:0000278(PANTHER)|GO:0003677(PANTHER)|GO:0003677(InterPro)|GO:0003887(PANTHER)|GO:0003887(InterPro)|GO:0006260(InterPro)|GO:0006272(PANTHER)|GO:0006281(InterPro)|GO:0006287(PANTHER)|GO:0006297(PANTHER)|GO:0008310(PANTHER)|GO:0008622(PANTHER)|GO:0008622(InterPro)|GO:0045004(PANTHER)
Tan05g0138 2204 FunFam DNA polymerase epsilon catalytic subunit 940 1124 - -
Tan05g0138 2204 FunFam DNA polymerase epsilon catalytic subunit 723 798 - -
Tan05g0138 2204 MobiDBLite consensus disorder prediction 1167 1187 - -
Tan05g0138 2204 CDD POLBc_epsilon 503 1121 - -
Tan05g0138 2204 Pfam Zinc finger domain of DNA polymerase-epsilon 2139 2201 IPR054475 -
Tan05g0138 2204 FunFam DNA polymerase epsilon catalytic subunit 756 936 - -
Tan05g0138 2204 Gene3D - 238 468 IPR036397 GO:0003676(InterPro)
Tan05g0138 2204 Pfam Domain of unknown function (DUF1744) 1530 1894 IPR013697 GO:0003887(InterPro)|GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0008270(InterPro)
Tan05g0138 2204 CDD DNA_polB_epsilon_exo 240 444 - -
Tan05g0138 2204 Pfam DNA polymerase family B, exonuclease domain 194 400 IPR006133 -
Tan05g0138 2204 FunFam DNA polymerase epsilon catalytic subunit 56 227 - -
Tan05g0138 2204 SUPERFAMILY DNA/RNA polymerases 486 1114 IPR043502 -
Tan05g0138 2204 FunFam DNA polymerase epsilon catalytic subunit 240 468 - -
Tan05g0138 2204 Pfam DNA polymerase epsilon catalytic subunit A, thumb domain 945 1120 - -
Tan05g0138 2204 SMART polmehr3 239 842 IPR006172 GO:0000166(InterPro)|GO:0003676(InterPro)|GO:0003887(InterPro)
Tan05g0138 2204 SMART DUF1744_2 1510 1894 IPR013697 GO:0003887(InterPro)|GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0008270(InterPro)
Tan05g0138 2204 MobiDBLite consensus disorder prediction 1157 1202 - -
Tan05g0138 2204 MobiDBLite consensus disorder prediction 1 23 - -
Tan05g0138 2204 SUPERFAMILY Ribonuclease H-like 66 467 IPR012337 -
Tan05g0138 2204 Gene3D DNA Polymerase, chain B, domain 1 56 233 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0138 Tan-Chr5:1077891 Tan05g2135 Tan-Chr5:72054809 0.00E+00 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0138 K02324 - csv:101208568 4106.6