Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0142 ATGGAGTCTTCTCCCGACGACATCGCCGACGACCTTCAGAGCTTGAGCTTCAACTCCACCAACACCAATCGCAGCACCAGCTCCGGCTCCGAGACCACTCTCACCGCCTCCTCCTCCTCCTTCGTTCACATCCCTTCCATACTCAACAAGCCTCACGCGCCTTCCTCCGACCCTTGCTGGTCCGCTGTTAACCGGATCCGATCCGAATCGTCCACTCGCCAACTCGCCTTCTCCGACCTCAAGTTCTCGAGCCGTCTCGGCTCTGGCGACATTGGCTCCGTCTACCTCGCCGGCCTCAAGTCCGCCGGTGCCGACGGATGCCTCTTCGCGGCGAAGGTAATGGACAAGAAGGAACTGGCGAGTCGGAGTAAAGAAGGCAGAGCGAGGACTGAGAGGGAGATTTTGGAGTCTTTGGACCATCCGTTTCTTCCGACGCTTTATGCCAGTATTGACTCGCCGAAGTGGCTCTGTCTCTTGACTGAGTTCTGTCCCGGCGGCGACCTCCATGTTCTCCGGCAACGGCAGCCTAACAAACGCTTCGATGAACTCGCCGTGAGATTCTATGCATCGGAGATAGTAGTTGCTATCGAGTACCTTCACATGATGGGGATCGTTTACCGTGATTTGAAGCCGGAAAATGTGCTGGTACGATCGGACGGCCATATCATGCTCACTGACTTTGATCTCTCCTTGAAGTGTGAGGATTCAACGGCTACCCCCCAGGTTATCACTGCCAAAAATCCGACAAATGGTACCGCCCCGCCAAAGGACTACCAAATCGATGCCCCTCCTTTCACATCCTCCTCCTGTATACTTCCAAACTGCATAGTTCCCGCCGTGTCGTGTTTCAATCCTAAACGCAAGCGCAAGAAGAAGTCCGGCCACCGCAATGGACCCGAGTTCGTTGCCGAGCCAGTCGATGTCCGGTCCATGTCGTTTGTCGGCACCCACGAGTACTTGGCACCGGAGATTGTCTCTGGTGAGGGCCACGGAAGTGCAGTAGACTGGTGGACTCTAGGAGTGTTTGTGTTTGAGTTGTTTTATGGAGTGACACCCTTTAGAGGCATGGACAATGAGCTCACCTTGGCCAACATAGTGGCCAGAGCCCTTGAATTCCCTAAAGAACCAGCCGTGCCGGCAGCGGCAAAGGACCTCATCTCGCAGTTACTGGTCAAAGATCCGGCGAGGCGGTTGGGGTCAACGACAGGGTCGTCGGCGATCAAGCACCATTCATTTTTTCAAGGGGTAAATTGGGCATTATTGAGATGTACGACGCCACCATTTATTCCTCCACCTTTTAGTAGAGAAGTTGCATCGAATGAAAGCTGCCCAGAGGCCCCAGTGGACTATTATTAG 1356 54.42 MESSPDDIADDLQSLSFNSTNTNRSTSSGSETTLTASSSSFVHIPSILNKPHAPSSDPCWSAVNRIRSESSTRQLAFSDLKFSSRLGSGDIGSVYLAGLKSAGADGCLFAAKVMDKKELASRSKEGRARTEREILESLDHPFLPTLYASIDSPKWLCLLTEFCPGGDLHVLRQRQPNKRFDELAVRFYASEIVVAIEYLHMMGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCEDSTATPQVITAKNPTNGTAPPKDYQIDAPPFTSSSCILPNCIVPAVSCFNPKRKRKKKSGHRNGPEFVAEPVDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGVFVFELFYGVTPFRGMDNELTLANIVARALEFPKEPAVPAAAKDLISQLLVKDPARRLGSTTGSSAIKHHSFFQGVNWALLRCTTPPFIPPPFSREVASNESCPEAPVDYY 451
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1118756 1122664 - Tan0017557.1 Tan05g0142 751450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0142 451 SUPERFAMILY Protein kinase-like (PK-like) 58 439 IPR011009 -
Tan05g0142 451 FunFam serine/threonine-protein kinase D6PK-like 167 234 - -
Tan05g0142 451 Pfam Protein kinase domain 310 413 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0142 451 Pfam Protein kinase domain 82 244 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0142 451 FunFam serine/threonine-protein kinase D6PK-like 308 431 - -
Tan05g0142 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g0142 451 Gene3D Phosphorylase Kinase; domain 1 79 166 - -
Tan05g0142 451 MobiDBLite consensus disorder prediction 9 32 - -
Tan05g0142 451 SMART serkin_6 80 413 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0142 451 PANTHER FLIPPASE KINASE 1-RELATED 24 432 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Tan05g0142 451 Gene3D Transferase(Phosphotransferase) domain 1 167 241 - -
Tan05g0142 451 Gene3D Transferase(Phosphotransferase) domain 1 309 431 - -
Tan05g0142 451 ProSiteProfiles Protein kinase domain profile. 80 413 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0142 451 FunFam serine/threonine-protein kinase D6PKL2 79 166 - -
Tan05g0142 451 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0142 Tan-Chr5:1118756 Tan10g0017 Tan-Chr10:455220 8.40E-113 dispersed
Tan05g0142 Tan-Chr5:1118756 Tan05g0143 Tan-Chr5:1135434 3.80E-113 tandem
Tan07g0730 Tan-Chr7:11679552 Tan05g0142 Tan-Chr5:1118756 2.20E-67 transposed
Tan03g1186 Tan-Chr3:68168131 Tan05g0142 Tan-Chr5:1118756 6.60E-106 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67539 PF00069 Pkinase 7.40E-35 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0142 K08286 - csv:101207262 850.892