Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0143 ATGACTACATTAGCCAGTACTTCTGAAATTGTTGAATCAACAGAAGAATTTGATTCTGAGAAAGCTGGGACGAGTTATGTGCGTGATGTAGGAAAAAGGTTTTCTATAGAGGATGATATTAATCGTCTGTTTCAGGCAATTGATATCAGAACCTTGCGTAAGAGAACGGGTCAGCAACGTGAAGTGGATAAAGATGCTTTGCGAAAGAGTGCGATGAAGAGACCAATTAGAGTAGGTTCATCTCACATGGCAGGGATTGGAATTTCTGAACCTGCAAGTTTAAAGCAAGCTTTGAGGGGCTTATGCATATCTCAGGCTGCAGAAATGGCTGCTACAAAGAGGTTAACGAGGTCTGTAGGTTCGCCCAGAATCTCTGAAGCAGGAACTATCAAAAGATTGTATAGGGCTGTGGTGGTTGAGGCCAATGGATCTGGCGTGCCTGTAAATGAAAGCAAAGCAAATTTGGTAGAAATTTCCATTGTTTCAGAAAGAATTATGTCAACTTTGCCTGGATTGTTACATAAAACTGAGGCAGATATATCAAACCAGGGTGCTGAGTCTTCATCTCTTAAGGACACTGGGGTATCAGAAGAGGCAAATGTGGATAGATTGATGTCAAAGGATCTTGTAGTTAATACGGCTACCAAAGTGGCAAGTATAAAGCCACCTGATGAGGTGGGAAAACTTAAGTCTCCTTCCTTTACTGCTCCTGGTGAGAAGGATCTGGCTCTGACCAGCATTGCTAATTCCTCAACTGAAGATTTGACAAAAAATTCAGTGCCGGAGAAGGAGGAGAGAGGTACAATGCGTTGTTTATCTTCTCTATCAAGCTCTGGATCTGTTGTTAGGCCGAATAAATCAGCTTTCAGTAATACACGTTTCATCAAACCTATTTTCAGGACCAAAAATTTTGTCAAGAAGAAAGCAAAACTCGAACCAAATTCCTGCCCTAGCATGTTTGATATGTGCACAATAACAGTTGACACTGATTTGGGTTCCATAGAAGAAAAGTTTGAGAACCAGATGCCAAAAAACGCACAGCATCATGAGAGTAAAGAAAAAGAGAAAGGTTCTTCTGTCTCTAGTAGCACAACTTTAGGTATTGAAGTGAGTGCAAGTGTAGTAAACACAGAGTCTAATAGACCTGGTACATCTCTCAACTGCTGTAACAGGAACAGACCAACTATTATGGCATTCGATGAGAGATCCAGATCAAGAGAGAAAGGGATGTTCTCTCAGAGCTCTAAAAGTAGTATTGGTGAATGTAGCAGTAGCCCAAGCATCAGTGGGGAAAGCATTCTCAGTGGATCAAGTCGTAGTGGAGTTAGGCCTCACATGTCAAAGGACTTGAAATGGGAAGCTATCCACCACATTCAAGATCAACATAAATGCCTAGGTCTGAGAAACTTCAAGCTGCTAAGAAGACTTGGTCTCGGGGACATTGGGACTGTGTATCTCTCTGAGCTATGCGATTCAAGCTGTCTATTTGCTATTAAAGTGATGAACAAGGAGTTATTGGCAAGCAGAAAAAAAATACTTCGGGCACAAACTGAGAGAGAGATACTGCAAATGCTCGACCATCCATTTCTCCCAACGTTATATGCTCATTTTGAGACGGATAAGCACTCATGCTTGGTCATGGACTACTGTCCTGGTGGAGATCTCCACGTGCTGCGACAGAAGCAACCATGCAAGAATTTCTCTGAGCATGCAGTCAGGTTCTATGTTGCCGAAGTTCTTCTTGCCCTGGAGTACTTACACATGCTAGGAGTTGTTTACCGAGACCTGAAACCCGAAAATGTGCTGGTTCGAGAAGATGGCCATATAATGCTCACAGATTTTGATTTGTCCCTTAGATGTGCTGTTAACCCAATGCTGCTTCAATCATCATCTCCAGTTGTGGAATCCACTAAGAGGACGTTGAATCCCTGTGATGAATCTAGTTGCATCGACCCTTTCTGCCTCCACCCATCATGGCAGGTCTCATGCTTCACTCCCAAAGTTTTATCTGCTCCATACAAATCCCGGAGAACAAAAGCAGATCATCAGGCTAGTCTGTTACCACAGCTTATAGTTGAGCCAACAGGTGCGCGGTCCAATTCGTTCGTAGGAACCCACGAATACCTCGCTCCTGAGATTGTCAAGGGTGATGGCCATGGGAGTGCTGTTGATTGGTGGACTTACGGGATTTTCCTGTTTGAGCTACTATATGGTAAGACTCCCTTCAAATGTTCAGGAAATGAGGACACATTAGCGAACATAGTATCCCAAACTCTCAAGTTCCCCGATAGCCCCATAGTTAGTTTTCATGCAAGAGATCTTATCAGATGTCTCCTAGAAAAGGAGCCTGAAAACCGATTAGGCTCGACAAAAGGGGCTATCGAGATTAAGCACCATCCTTTTTTTGAAGGCATCAATTGGGCTCTAATACGTTGTGCAGTTCCACCCGAGCTTCCCAAGTTTTTCGACGGTGGAACTGGTGCAATGCCAATGGATTCTGGCGAGAACACAAAGCGTAGAGATCTCGAAAATATAGAAGCGGATGCAGCAATCTTTGACCTGTTTTAG 2568 43.34 MTTLASTSEIVESTEEFDSEKAGTSYVRDVGKRFSIEDDINRLFQAIDIRTLRKRTGQQREVDKDALRKSAMKRPIRVGSSHMAGIGISEPASLKQALRGLCISQAAEMAATKRLTRSVGSPRISEAGTIKRLYRAVVVEANGSGVPVNESKANLVEISIVSERIMSTLPGLLHKTEADISNQGAESSSLKDTGVSEEANVDRLMSKDLVVNTATKVASIKPPDEVGKLKSPSFTAPGEKDLALTSIANSSTEDLTKNSVPEKEERGTMRCLSSLSSSGSVVRPNKSAFSNTRFIKPIFRTKNFVKKKAKLEPNSCPSMFDMCTITVDTDLGSIEEKFENQMPKNAQHHESKEKEKGSSVSSSTTLGIEVSASVVNTESNRPGTSLNCCNRNRPTIMAFDERSRSREKGMFSQSSKSSIGECSSSPSISGESILSGSSRSGVRPHMSKDLKWEAIHHIQDQHKCLGLRNFKLLRRLGLGDIGTVYLSELCDSSCLFAIKVMNKELLASRKKILRAQTEREILQMLDHPFLPTLYAHFETDKHSCLVMDYCPGGDLHVLRQKQPCKNFSEHAVRFYVAEVLLALEYLHMLGVVYRDLKPENVLVREDGHIMLTDFDLSLRCAVNPMLLQSSSPVVESTKRTLNPCDESSCIDPFCLHPSWQVSCFTPKVLSAPYKSRRTKADHQASLLPQLIVEPTGARSNSFVGTHEYLAPEIVKGDGHGSAVDWWTYGIFLFELLYGKTPFKCSGNEDTLANIVSQTLKFPDSPIVSFHARDLIRCLLEKEPENRLGSTKGAIEIKHHPFFEGINWALIRCAVPPELPKFFDGGTGAMPMDSGENTKRRDLENIEADAAIFDLF 855
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1135434 1138462 + Tan0014318.1 Tan05g0143 751451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0143 855 ProSitePatterns Serine/Threonine protein kinases active-site signature. 591 603 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g0143 855 FunFam Serine/threonine-protein kinase D6PK-like 468 553 - -
Tan05g0143 855 PANTHER FLIPPASE KINASE 1-RELATED 336 823 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Tan05g0143 855 MobiDBLite consensus disorder prediction 341 364 - -
Tan05g0143 855 MobiDBLite consensus disorder prediction 341 357 - -
Tan05g0143 855 MobiDBLite consensus disorder prediction 410 442 - -
Tan05g0143 855 CDD STKc_phototropin_like 470 820 - -
Tan05g0143 855 FunFam serine/threonine-protein kinase D6PK-like 554 621 - -
Tan05g0143 855 Gene3D Transferase(Phosphotransferase) domain 1 697 816 - -
Tan05g0143 855 SMART serkin_6 470 802 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0143 855 Gene3D Transferase(Phosphotransferase) domain 1 550 618 - -
Tan05g0143 855 FunFam serine/threonine-protein kinase D6PK-like 697 820 - -
Tan05g0143 855 Pfam Protein kinase domain 699 802 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0143 855 Pfam Protein kinase domain 471 619 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0143 855 Gene3D Phosphorylase Kinase; domain 1 468 549 - -
Tan05g0143 855 SUPERFAMILY Protein kinase-like (PK-like) 444 820 IPR011009 -
Tan05g0143 855 MobiDBLite consensus disorder prediction 402 442 - -
Tan05g0143 855 ProSiteProfiles Protein kinase domain profile. 470 802 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0143 855 MobiDBLite consensus disorder prediction 248 268 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1186 Tan-Chr3:68168131 Tan05g0143 Tan-Chr5:1135434 8.90E-196 dispersed
Tan05g0143 Tan-Chr5:1135434 Tan05g1838 Tan-Chr5:62340206 6.80E-148 dispersed
Tan05g0142 Tan-Chr5:1118756 Tan05g0143 Tan-Chr5:1135434 3.80E-113 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67540 PF00069 Pkinase 2.00E-36 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0143 - - - 0.0