Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0144 ATGAGGGCGTTGCGATTGCAGCTTAGAGTTGACGCCAATCTTGTAAATCCATTCAGTCATTTCTGCCCTGCTTCATCACTAAATCCCTCGCCATTGCTTGTTTTTCAACCTATAAAATACTCCCATCTTCGAAAATTCAAGCCTTCTCGAAGTTCTCGACGAACCCTTTTCTCTACTCCATCGCCATCTTTCTTCGTAGCTTCCATGGCCGATTCCTCCCTTTCCACAAGCTCAGAGACAGAGACGAAACCTTTCTCTGTGCTCTTTGTGTGCTTGGGCAACATCTGCAGAAGCCCAGCTGCTGAAGGAGTATTCAGGGACCTGGTGAGGAAGAAGGGTCTCGATTCCAAATTCATAATCGATTCTGCTGGCACAATTGGTTACCATGAGGGTAATGAGGCCGACTCAAGAATGAGGGCAGCCTCTAAACGACGCGGGATAGCGATAACGTCCATATCGAGGCCAATCCAGCCTTCTGATTTTGTAAATTTTGATCTTATTCTTGCCATGGACAAGCAAAACAGAGAGGATATTTTAGGGGCTTTTGAACGGTGGAGAATTAAGAATACCCTTCCTCCTGATTCACATAAGAAGGTCAAATTAATGTGCTCGTATTGTAGAAAGCATGATGAAACAGAAGTACCGGATCCTTATTATGGTGGGCAACAAGGTTTTGAGAAGGTTCTGGACTTGCTTGAAGATGCATGTGAATCACTGTTGGAAAGCATCTTAGCAGAGAACAAACACATTTCAGATTAA 759 44.27 MRALRLQLRVDANLVNPFSHFCPASSLNPSPLLVFQPIKYSHLRKFKPSRSSRRTLFSTPSPSFFVASMADSSLSTSSETETKPFSVLFVCLGNICRSPAAEGVFRDLVRKKGLDSKFIIDSAGTIGYHEGNEADSRMRAASKRRGIAITSISRPIQPSDFVNFDLILAMDKQNREDILGAFERWRIKNTLPPDSHKKVKLMCSYCRKHDETEVPDPYYGGQQGFEKVLDLLEDACESLLESILAENKHISD 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1138852 1140675 + Tan0014687.1 Tan05g0144 751452

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0144 252 SUPERFAMILY Phosphotyrosine protein phosphatases I 83 243 IPR036196 -
Tan05g0144 252 CDD LMWPTP 86 241 - -
Tan05g0144 252 SMART LMWPc_2 85 242 IPR023485 -
Tan05g0144 252 PRINTS LMW phosphotyrosine protein phosphatase signature 130 146 IPR017867 GO:0004725(InterPro)|GO:0006470(InterPro)
Tan05g0144 252 PRINTS LMW phosphotyrosine protein phosphatase signature 214 229 IPR017867 GO:0004725(InterPro)|GO:0006470(InterPro)
Tan05g0144 252 PRINTS LMW phosphotyrosine protein phosphatase signature 87 104 IPR017867 GO:0004725(InterPro)|GO:0006470(InterPro)
Tan05g0144 252 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 68 249 IPR052995 -
Tan05g0144 252 Gene3D - 68 248 - -
Tan05g0144 252 FunFam Low molecular weight protein-tyrosine-phosphatase 84 248 - -
Tan05g0144 252 Pfam Low molecular weight phosphotyrosine protein phosphatase 87 240 IPR023485 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0144 K25307 - - csv:101207515 427.172
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi6g1176 Blo03g01059 . . . . . Bma14g00419 . . . . . . . . . . . . . . . . . Cla02g02139 Cam02g2272 Cec02g2310 Cco02g2353 Clacu02g2250 Cmu02g2183 Cre02g2507 . . Cone18ag0218 Cone11ag1360 . Csa06g01286 Chy11g00890 . . . Bda07g00669 . . Bpe11g00849 . . Sed05g1209 Cmo02g01379 . Cma02g01340 . Car02g01126 . . . Bhi10g00068 Tan05g0144 Cmetu11g0267 . Hepe08g0239 . . . . . . . . . . . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Tan03g1590 . 33 605 Protein tyrosine phosphatase (PTP) family AT3G50110 60.7 2.2e-188 656.4
Tan03g1575 . 33 457 Protein tyrosine phosphatase (PTP) family AT3G50110 72.1 3.3e-184 642.5
Tan03g1577 . 33 457 Protein tyrosine phosphatase (PTP) family AT3G50110 72.1 3.3e-184 642.5
Tan02g0941 . 19 610 Protein tyrosine phosphatase (PTP) family AT3G50110 57.1 5.9e-181 631.7
Tan03g1576 . 33 482 Protein tyrosine phosphatase (PTP) family AT3G50110 68.1 5.0e-180 628.6
Tan03g1578 . 33 482 Protein tyrosine phosphatase (PTP) family AT3G50110 68.1 5.0e-180 628.6
Tan02g1430 . 9 395 Protein tyrosine phosphatase (PTP) family AT5G39400 64.6 3.3e-148 522.3
Tan11g0955 . 1 854 Protein tyrosine phosphatase (PTP) family AT3G10550 68.6 0.0e+00 1168.3
Tan11g0955 . 1 854 Protein tyrosine phosphatase (PTP) family AT5G04540 66.0 0.0e+00 1114.8
Tan09g1556 . 1 1271 Protein tyrosine phosphatase (PTP) family AT5G58160 54.6 0.0e+00 1093.2
Tan01g3567 . 1 1386 Protein tyrosine phosphatase (PTP) family AT5G58160 50.8 5.5e-303 1038.1
Tan09g1557 . 2 1202 Protein tyrosine phosphatase (PTP) family AT5G58160 53.8 2.5e-287 986.1
Tan01g3002 . 87 393 Protein tyrosine phosphatase (PTP) family AT1G71860 66.1 1.2e-119 427.2
Tan01g3003 . 87 328 Protein tyrosine phosphatase (PTP) family AT1G71860 61.6 8.6e-86 314.7
Tan09g2433 . 13 904 Protein tyrosine phosphatase (PTP) family AT5G23720 64.8 4.3e-313 1071.2
Tan06g2562 . 33 172 Protein tyrosine phosphatase (PTP) family AT3G06110 57.1 2.9e-42 169.1
Tan06g2563 . 33 172 Protein tyrosine phosphatase (PTP) family AT3G06110 57.1 2.9e-42 169.1
Tan02g0125 . 1 166 Protein tyrosine phosphatase (PTP) family AT2G04550 76.9 3.5e-70 261.9
Tan02g0126 . 1 166 Protein tyrosine phosphatase (PTP) family AT2G04550 76.9 3.5e-70 261.9
Tan04g0664 . 96 376 Protein tyrosine phosphatase (PTP) family AT3G52180 70.5 8.7e-116 414.1
Tan04g1399 . 4 282 Protein tyrosine phosphatase (PTP) family AT3G10940 68.0 3.8e-111 398.7
Tan04g1400 . 4 282 Protein tyrosine phosphatase (PTP) family AT3G10940 68.0 3.8e-111 398.7
Tan07g1359 . 141 589 Protein tyrosine phosphatase (PTP) family AT3G01510 73.9 7.6e-207 717.2
Tan05g0689 . 9 210 Protein tyrosine phosphatase (PTP) family AT2G32960 59.9 2.6e-74 276.2
Tan05g0690 . 9 210 Protein tyrosine phosphatase (PTP) family AT2G32960 59.9 2.6e-74 276.2
Tan02g0134 . 1 241 Protein tyrosine phosphatase (PTP) family AT2G32960 56.0 6.3e-73 271.6
Tan02g0133 . 1 211 Protein tyrosine phosphatase (PTP) family AT2G32960 55.3 1.6e-71 266.9
Tan09g0602 . 14 170 Protein tyrosine phosphatase (PTP) family AT2G32960 50.8 2.8e-52 203.0
Tan05g0691 . 9 151 Protein tyrosine phosphatase (PTP) family AT2G32960 53.4 9.9e-42 167.9
Tan05g0692 . 9 151 Protein tyrosine phosphatase (PTP) family AT2G32960 53.4 9.9e-42 167.9
Tan01g2070 . 1 333 Protein tyrosine phosphatase (PTP) family AT2G35680 56.8 1.7e-102 370.2
Tan08g0099 . 12 263 Protein tyrosine phosphatase (PTP) family AT2G35680 54.0 1.2e-79 294.3
Tan08g0100 . 12 263 Protein tyrosine phosphatase (PTP) family AT2G35680 54.0 1.2e-79 294.3
Tan08g0101 . 12 263 Protein tyrosine phosphatase (PTP) family AT2G35680 54.0 1.2e-79 294.3
Tan08g0102 . 12 195 Protein tyrosine phosphatase (PTP) family AT2G35680 70.7 2.3e-75 280.0
Tan08g0102 . 27 198 Protein tyrosine phosphatase (PTP) family AT5G56610 52.9 2.2e-43 172.9
Tan01g2070 . 37 209 Protein tyrosine phosphatase (PTP) family AT5G56610 50.9 1.4e-42 170.2
Tan05g0689 . 43 211 Protein tyrosine phosphatase (PTP) family AT4G03960 78.1 1.5e-77 286.6
Tan05g0690 . 43 211 Protein tyrosine phosphatase (PTP) family AT4G03960 78.1 1.5e-77 286.6
Tan02g0133 . 42 211 Protein tyrosine phosphatase (PTP) family AT4G03960 75.9 1.8e-75 279.6
Tan02g0134 . 42 241 Protein tyrosine phosphatase (PTP) family AT4G03960 64.5 1.0e-70 263.8
Tan09g0602 . 12 183 Protein tyrosine phosphatase (PTP) family AT4G03960 57.0 2.7e-55 212.6
Tan05g0691 . 43 151 Protein tyrosine phosphatase (PTP) family AT4G03960 72.5 9.0e-43 171.0
Tan05g0692 . 43 151 Protein tyrosine phosphatase (PTP) family AT4G03960 72.5 9.0e-43 171.0
Tan09g0602 . 12 196 Protein tyrosine phosphatase (PTP) family AT3G02800 71.9 2.3e-78 289.3
Tan05g0689 . 40 206 Protein tyrosine phosphatase (PTP) family AT3G02800 61.1 1.5e-56 216.9
Tan05g0690 . 40 206 Protein tyrosine phosphatase (PTP) family AT3G02800 61.1 1.5e-56 216.9
Tan02g0133 . 47 200 Protein tyrosine phosphatase (PTP) family AT3G02800 61.0 8.0e-55 211.1
Tan02g0134 . 47 230 Protein tyrosine phosphatase (PTP) family AT3G02800 51.1 4.6e-50 195.3
Tan04g0328 . 1 188 Protein tyrosine phosphatase (PTP) family AT3G55270 65.6 1.4e-62 238.8
Tan04g0329 . 1 188 Protein tyrosine phosphatase (PTP) family AT3G55270 65.6 1.4e-62 238.8
Tan04g0330 . 1 188 Protein tyrosine phosphatase (PTP) family AT3G55270 65.6 1.4e-62 238.8
Tan04g0331 . 1 188 Protein tyrosine phosphatase (PTP) family AT3G55270 65.6 1.4e-62 238.8
Tan02g1430 . 9 395 Protein tyrosine phosphatase (PTP) family AT5G39400 64.6 3.3e-148 522.3
Tan02g0941 . 31 610 Protein tyrosine phosphatase (PTP) family AT3G19420 66.2 1.4e-219 760.0
Tan03g1590 . 31 605 Protein tyrosine phosphatase (PTP) family AT3G19420 62.7 2.6e-197 686.0
Tan03g1575 . 31 454 Protein tyrosine phosphatase (PTP) family AT3G19420 73.4 2.3e-190 662.9
Tan03g1577 . 31 454 Protein tyrosine phosphatase (PTP) family AT3G19420 73.4 2.3e-190 662.9
Tan03g1576 . 31 479 Protein tyrosine phosphatase (PTP) family AT3G19420 69.3 3.5e-186 649.0
Tan03g1578 . 31 479 Protein tyrosine phosphatase (PTP) family AT3G19420 69.3 3.5e-186 649.0
Tan03g1590 . 33 605 Protein tyrosine phosphatase (PTP) family AT3G50110 60.7 2.2e-188 656.4
Tan03g1575 . 33 457 Protein tyrosine phosphatase (PTP) family AT3G50110 72.1 3.3e-184 642.5
Tan03g1577 . 33 457 Protein tyrosine phosphatase (PTP) family AT3G50110 72.1 3.3e-184 642.5
Tan02g0941 . 19 610 Protein tyrosine phosphatase (PTP) family AT3G50110 57.1 5.9e-181 631.7
Tan03g1576 . 33 482 Protein tyrosine phosphatase (PTP) family AT3G50110 68.1 5.0e-180 628.6
Tan03g1578 . 33 482 Protein tyrosine phosphatase (PTP) family AT3G50110 68.1 5.0e-180 628.6
Tan09g1556 . 1 1271 Protein tyrosine phosphatase (PTP) family AT5G58160 54.6 0.0e+00 1093.2
Tan01g3567 . 1 1386 Protein tyrosine phosphatase (PTP) family AT5G58160 50.8 5.5e-303 1038.1
Tan09g1557 . 2 1202 Protein tyrosine phosphatase (PTP) family AT5G58160 53.8 2.5e-287 986.1
Tan11g0955 . 1 854 Protein tyrosine phosphatase (PTP) family AT3G10550 68.6 0.0e+00 1168.3
Tan11g0955 . 1 854 Protein tyrosine phosphatase (PTP) family AT5G04540 66.0 0.0e+00 1114.8
Tan05g0144 . 42 247 Protein tyrosine phosphatase (PTP) family AT3G44620 57.9 3.3e-69 259.2
Tan01g2161 . 22 318 Protein tyrosine phosphatase (PTP) family AT2G35320 63.3 1.2e-110 397.1
Tan03g0829 . 1 673 Protein tyrosine phosphatase (PTP) family AT3G09100 70.3 2.2e-282 968.8
Tan03g0830 . 1 673 Protein tyrosine phosphatase (PTP) family AT3G09100 70.3 2.2e-282 968.8
Tan03g0831 . 1 673 Protein tyrosine phosphatase (PTP) family AT3G09100 70.3 2.2e-282 968.8
Tan03g0832 . 1 673 Protein tyrosine phosphatase (PTP) family AT3G09100 70.3 2.2e-282 968.8
Tan03g0833 . 1 673 Protein tyrosine phosphatase (PTP) family AT3G09100 70.3 2.2e-282 968.8
Tan03g0834 . 1 673 Protein tyrosine phosphatase (PTP) family AT3G09100 70.3 2.2e-282 968.8
Tan03g0829 . 5 673 Protein tyrosine phosphatase (PTP) family AT5G01290 66.7 1.1e-257 886.7
Tan03g0830 . 5 673 Protein tyrosine phosphatase (PTP) family AT5G01290 66.7 1.1e-257 886.7
Tan03g0831 . 5 673 Protein tyrosine phosphatase (PTP) family AT5G01290 66.7 1.1e-257 886.7
Tan03g0832 . 5 673 Protein tyrosine phosphatase (PTP) family AT5G01290 66.7 1.1e-257 886.7
Tan03g0833 . 5 673 Protein tyrosine phosphatase (PTP) family AT5G01290 66.7 1.1e-257 886.7
Tan03g0834 . 5 673 Protein tyrosine phosphatase (PTP) family AT5G01290 66.7 1.1e-257 886.7
Tan03g0829 . 86 673 Protein tyrosine phosphatase (PTP) family AT5G28210 57.0 1.3e-183 640.6
Tan03g0830 . 86 673 Protein tyrosine phosphatase (PTP) family AT5G28210 57.0 1.3e-183 640.6
Tan03g0831 . 86 673 Protein tyrosine phosphatase (PTP) family AT5G28210 57.0 1.3e-183 640.6
Tan03g0832 . 86 673 Protein tyrosine phosphatase (PTP) family AT5G28210 57.0 1.3e-183 640.6
Tan03g0833 . 86 673 Protein tyrosine phosphatase (PTP) family AT5G28210 57.0 1.3e-183 640.6
Tan03g0834 . 86 673 Protein tyrosine phosphatase (PTP) family AT5G28210 57.0 1.3e-183 640.6
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011691 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 0 1 1 1 1 1 1 1 0 2 1 1 30