Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0144 ATGAGGGCGTTGCGATTGCAGCTTAGAGTTGACGCCAATCTTGTAAATCCATTCAGTCATTTCTGCCCTGCTTCATCACTAAATCCCTCGCCATTGCTTGTTTTTCAACCTATAAAATACTCCCATCTTCGAAAATTCAAGCCTTCTCGAAGTTCTCGACGAACCCTTTTCTCTACTCCATCGCCATCTTTCTTCGTAGCTTCCATGGCCGATTCCTCCCTTTCCACAAGCTCAGAGACAGAGACGAAACCTTTCTCTGTGCTCTTTGTGTGCTTGGGCAACATCTGCAGAAGCCCAGCTGCTGAAGGAGTATTCAGGGACCTGGTGAGGAAGAAGGGTCTCGATTCCAAATTCATAATCGATTCTGCTGGCACAATTGGTTACCATGAGGGTAATGAGGCCGACTCAAGAATGAGGGCAGCCTCTAAACGACGCGGGATAGCGATAACGTCCATATCGAGGCCAATCCAGCCTTCTGATTTTGTAAATTTTGATCTTATTCTTGCCATGGACAAGCAAAACAGAGAGGATATTTTAGGGGCTTTTGAACGGTGGAGAATTAAGAATACCCTTCCTCCTGATTCACATAAGAAGGTCAAATTAATGTGCTCGTATTGTAGAAAGCATGATGAAACAGAAGTACCGGATCCTTATTATGGTGGGCAACAAGGTTTTGAGAAGGTTCTGGACTTGCTTGAAGATGCATGTGAATCACTGTTGGAAAGCATCTTAGCAGAGAACAAACACATTTCAGATTAA 759 44.27 MRALRLQLRVDANLVNPFSHFCPASSLNPSPLLVFQPIKYSHLRKFKPSRSSRRTLFSTPSPSFFVASMADSSLSTSSETETKPFSVLFVCLGNICRSPAAEGVFRDLVRKKGLDSKFIIDSAGTIGYHEGNEADSRMRAASKRRGIAITSISRPIQPSDFVNFDLILAMDKQNREDILGAFERWRIKNTLPPDSHKKVKLMCSYCRKHDETEVPDPYYGGQQGFEKVLDLLEDACESLLESILAENKHISD 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1138852 1140675 + Tan0014687.1 Tan05g0144 751452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0144 252 SUPERFAMILY Phosphotyrosine protein phosphatases I 83 243 IPR036196 -
Tan05g0144 252 CDD LMWPTP 86 241 - -
Tan05g0144 252 SMART LMWPc_2 85 242 IPR023485 -
Tan05g0144 252 PRINTS LMW phosphotyrosine protein phosphatase signature 130 146 IPR017867 GO:0004725(InterPro)|GO:0006470(InterPro)
Tan05g0144 252 PRINTS LMW phosphotyrosine protein phosphatase signature 214 229 IPR017867 GO:0004725(InterPro)|GO:0006470(InterPro)
Tan05g0144 252 PRINTS LMW phosphotyrosine protein phosphatase signature 87 104 IPR017867 GO:0004725(InterPro)|GO:0006470(InterPro)
Tan05g0144 252 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 68 249 IPR052995 -
Tan05g0144 252 Gene3D - 68 248 - -
Tan05g0144 252 FunFam Low molecular weight protein-tyrosine-phosphatase 84 248 - -
Tan05g0144 252 Pfam Low molecular weight phosphotyrosine protein phosphatase 87 240 IPR023485 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0144 K25307 - csv:101207515 427.172