Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan05g0144 | ATGAGGGCGTTGCGATTGCAGCTTAGAGTTGACGCCAATCTTGTAAATCCATTCAGTCATTTCTGCCCTGCTTCATCACTAAATCCCTCGCCATTGCTTGTTTTTCAACCTATAAAATACTCCCATCTTCGAAAATTCAAGCCTTCTCGAAGTTCTCGACGAACCCTTTTCTCTACTCCATCGCCATCTTTCTTCGTAGCTTCCATGGCCGATTCCTCCCTTTCCACAAGCTCAGAGACAGAGACGAAACCTTTCTCTGTGCTCTTTGTGTGCTTGGGCAACATCTGCAGAAGCCCAGCTGCTGAAGGAGTATTCAGGGACCTGGTGAGGAAGAAGGGTCTCGATTCCAAATTCATAATCGATTCTGCTGGCACAATTGGTTACCATGAGGGTAATGAGGCCGACTCAAGAATGAGGGCAGCCTCTAAACGACGCGGGATAGCGATAACGTCCATATCGAGGCCAATCCAGCCTTCTGATTTTGTAAATTTTGATCTTATTCTTGCCATGGACAAGCAAAACAGAGAGGATATTTTAGGGGCTTTTGAACGGTGGAGAATTAAGAATACCCTTCCTCCTGATTCACATAAGAAGGTCAAATTAATGTGCTCGTATTGTAGAAAGCATGATGAAACAGAAGTACCGGATCCTTATTATGGTGGGCAACAAGGTTTTGAGAAGGTTCTGGACTTGCTTGAAGATGCATGTGAATCACTGTTGGAAAGCATCTTAGCAGAGAACAAACACATTTCAGATTAA | 759 | 44.27 | MRALRLQLRVDANLVNPFSHFCPASSLNPSPLLVFQPIKYSHLRKFKPSRSSRRTLFSTPSPSFFVASMADSSLSTSSETETKPFSVLFVCLGNICRSPAAEGVFRDLVRKKGLDSKFIIDSAGTIGYHEGNEADSRMRAASKRRGIAITSISRPIQPSDFVNFDLILAMDKQNREDILGAFERWRIKNTLPPDSHKKVKLMCSYCRKHDETEVPDPYYGGQQGFEKVLDLLEDACESLLESILAENKHISD | 252 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 1138852 | 1140675 | + | Tan0014687.1 | Tan05g0144 | 751452 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan05g0144 | 252 | SUPERFAMILY | Phosphotyrosine protein phosphatases I | 83 | 243 | IPR036196 | - | |
Tan05g0144 | 252 | CDD | LMWPTP | 86 | 241 | - | - | |
Tan05g0144 | 252 | SMART | LMWPc_2 | 85 | 242 | IPR023485 | - | |
Tan05g0144 | 252 | PRINTS | LMW phosphotyrosine protein phosphatase signature | 130 | 146 | IPR017867 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Tan05g0144 | 252 | PRINTS | LMW phosphotyrosine protein phosphatase signature | 214 | 229 | IPR017867 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Tan05g0144 | 252 | PRINTS | LMW phosphotyrosine protein phosphatase signature | 87 | 104 | IPR017867 | GO:0004725(InterPro)|GO:0006470(InterPro) | |
Tan05g0144 | 252 | PANTHER | LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED | 68 | 249 | IPR052995 | - | |
Tan05g0144 | 252 | Gene3D | - | 68 | 248 | - | - | |
Tan05g0144 | 252 | FunFam | Low molecular weight protein-tyrosine-phosphatase | 84 | 248 | - | - | |
Tan05g0144 | 252 | Pfam | Low molecular weight phosphotyrosine protein phosphatase | 87 | 240 | IPR023485 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan05g0144 | K25307 | - | csv:101207515 | 427.172 |