Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0236 ATGAAGCACCAAGTGGCAACCACCTTCATTTCTTTAATGAGCTTTATCTTGATGCAACAAGCCTTTTGTGCTGACACTTCTAATACATCCACCCCTGGCAACTGGACGTGTAGTTGTTTTTCTCCATACCAAGAAAATCAGAGATTAACACTTGGTGCAAACTGTTCTACATCTTGTTCATGTACGCAAGATGTTGGGGGAACTGGATTGTGGACATGCATTTGTGCAACTGATGGCTTTCCAAAAGTTGCAGCCGATCACCGTGATTCTAATTGTTTTACGTCCTGCAACTGCTCTTCTGGACTGCTTCCGGAGTCCCCATCTTCTAAAAGTCATCTTTCAAGCAATGTGGTTGTGATTATTCTCTTACTATGTGTAATAATCATAACATTAGCATTCCTCGTCTTAGTGGTTTGCTATCTTTCTCAAAGAGACAAGTGCCGTGCTCGAACTCCAATATTTTCATTAGATAAGCAATTGAGCTACAACAGCTTGACCAACCTAATTAGTCACAAGAGTTCTTCAACACCAGATAGCAAGGTTATGATGGGTTCCCCTGTGAATAACATCAAGGGATGCTTTTACATGAACCAATGCTTGTTGAGGGCTAAATCTAGGAGTATATGTGGGATCATCATCCAATTCTCATACTCGGAGTTGGAAAATGCAACAAATAAGTTTGCAGCCTCCCATCTTGTAGGACGTGGGGGAAGTAGCTTTGTTTATCGTGGTGAGTTGATGGACGGTAGAACAGTGGCAGTAAAACGGCTCAATGTTCAAGGAGGACCGGATGTGGACTACTTGTTCTTAACAGAAATACAATTGTTATCAAGACTTCATCATTGTCACGTGGTGCCTCTACTTGGTTATTGCACAGAATCAAGGGGGAAACATACTGAAAGGCTTTTGGTATATGAATACATGCCAAAGGGTAATCTAAGAGACTGTTTGGATGCAGCTTCAGGGGAAAAAATGGATTGGAGTTCTCGTGTTACAATTGCTTTAGGAGCTGCTAGAGGCTTGGAATATCTTCATGAAGCAGCTGCTCCCAGAATTTTGCATAGAGACGTCAAGTCAACAAATATTCTTTTGGACAAAGATTGGAGAGCAAAAATAACAGACCTTGGTATGGCTACAAGGTTAAGAGGTGATGATCTTCCTAGCTGTTCCAGTTCTCCTGCAAGAATGCAGGGAACTTTTGGGTATTTTGCACCAGAGTATGCAATTGTTGGAAGAGCATCTTTGAAGTCTGATGTCTTTAGTTTTGGAGTAGTTCTTCTTGAGCTTATAACGGGTCAGCATCCCATCCATAAATCAGCAAGCAAAGGAGAGGAAAGCCTTGCAATATGGGTAGAATAA 1359 41.57 MKHQVATTFISLMSFILMQQAFCADTSNTSTPGNWTCSCFSPYQENQRLTLGANCSTSCSCTQDVGGTGLWTCICATDGFPKVAADHRDSNCFTSCNCSSGLLPESPSSKSHLSSNVVVIILLLCVIIITLAFLVLVVCYLSQRDKCRARTPIFSLDKQLSYNSLTNLISHKSSSTPDSKVMMGSPVNNIKGCFYMNQCLLRAKSRSICGIIIQFSYSELENATNKFAASHLVGRGGSSFVYRGELMDGRTVAVKRLNVQGGPDVDYLFLTEIQLLSRLHHCHVVPLLGYCTESRGKHTERLLVYEYMPKGNLRDCLDAASGEKMDWSSRVTIALGAARGLEYLHEAAAPRILHRDVKSTNILLDKDWRAKITDLGMATRLRGDDLPSCSSSPARMQGTFGYFAPEYAIVGRASLKSDVFSFGVVLLELITGQHPIHKSASKGEESLAIWVE 452
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1802700 1808531 + Tan0019191.5 Tan05g0236 751544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0236 452 Pfam Protein kinase domain 230 443 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0236 452 PANTHER OS01G0750732 PROTEIN 23 450 IPR050885 -
Tan05g0236 452 ProSitePatterns Protein kinases ATP-binding region signature. 233 255 IPR017441 GO:0005524(InterPro)
Tan05g0236 452 Gene3D Phosphorylase Kinase; domain 1 201 307 - -
Tan05g0236 452 FunFam Os07g0541700 protein 310 399 - -
Tan05g0236 452 SMART serkin_6 227 451 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0236 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 352 364 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g0236 452 Gene3D Transferase(Phosphotransferase) domain 1 308 452 - -
Tan05g0236 452 ProSiteProfiles Protein kinase domain profile. 227 452 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0236 452 SUPERFAMILY Protein kinase-like (PK-like) 210 439 IPR011009 -
Tan05g0236 452 FunFam receptor-like serine/threonine-protein kinase NCRK 201 307 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0234 Tan-Chr5:1801858 Tan05g0236 Tan-Chr5:1802700 2.30E-259 dispersed
Tan05g0236 Tan-Chr5:1802700 Tan05g0238 Tan-Chr5:1803175 2.30E-259 dispersed
Tan05g0235 Tan-Chr5:1802700 Tan05g0236 Tan-Chr5:1802700 4.60E-258 tandem
Tan05g0236 Tan-Chr5:1802700 Tan05g0237 Tan-Chr5:1803175 2.50E-258 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67548 PF00069 Pkinase 4.20E-39 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0236 - - - 0.0