Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0251 ATGGCCATGGCTATAGCTCATCACAGAGAGAGTAGTAGTGGGAGCATAACCAGGCATCTTGACAGTACTGGAAAGTACGTTCGATACACTTCAGAGCAGGTTGAGGCTCTTGAGCGAGTCTATGCTGAGTGCCCGAAGCCAAGTTCCCTTCGAAGGCAGCAGCTCATCCGAGAATGCCCAATTCTTTCGAACATAGAGCCCAAACAGATCAAAGTTTGGTTTCAGAATCGCAGATGTAGGGAGAAGCAAAGGAAGGAGGCTTCTCGGCTGCAAACGGTGAACAGGAAATTGAATGCTATGAACAAGTTGTTGATGGAGGAGAATGATCGGCTGCAGAAACAAGTGTCGCAATTGGTGTGTGAAAATGGGTTTATGCGGCAGCAATTGCAAACAGTGCCAGCAGCAACTACTGATGCAAGCTGTGATTCTGTGGTCACCACTCCTCAACCCTCTCGAAGAGATGCTAATAACCCAGCTGGACTCCTCTCAATTGCAGAGGAGACCTTGGCAGAGTTCCTTTCAAAGGCTACAGGAACTGCTGTTGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCTGTTGGGATCTTTGCTATTTCACAAAGTTGCGGCGGAGTGGCAGCAAGAGCCTGTGGTCTTGTAAGTTTGGAGCCTTCAAAGATTGCAGAGATCCTTAAAGATCGTCCATCGTGGTTTCGTGATTGTCGAAGCCTTGAGGTTTTTACCATGTTTCCAGCTGGAAATGGTGGGACAATTGAACTTGTTTACACACAGGTATATGCTCCAACTACCCTTGCTCCTGCACGTGATTTTTGGACCCTAAGATACACAATAACTTTGGAAAACGGCAGCCTTGTGGTCTGCGAGAGATCTCTCTCTGGTTCTGGTGCTGGTCCTAGTGCAGCAGCTGCTGCTCAGTTTGTTAGAGCTGAGATGCTCCCAAGTGGTTATTTGATTCGACCATGTGAGGGTGGTGGGTCCATCATACACATTGTAGATCACTTAAATCTTGAGGCATGGAATGTTCCTGAGGTGCTGCGACCACTTTATGAATCATCAAAAGTAGTGGCTCAGAAGATGACTATAGCAGCACTACGGTACGTTAGGCAAATAGCTCAGGAGACGAGTGGTGAAGTGGTTTATGGTTTGGGCCGTCAACCTGCTGTTCTGCGAACCTTTAGCCAAAGATTGAGCAGGGGTTTTAATGATGCAGTGAATGGATTTAACGACAATGGATGGTCATTGATTAATTGTGAAGGCGCTGAGGATGTGGTACTTGCTGTGAACTCTACGAAAAATTTGGGCACAACATCGAACCCTGCTAACTCCTTAACGTATCCCGGGGGAGTTCTTTGTGCAAAGGCTTCCATGCTACTCCAAAATGTTCCTCCTGCTGTGTTAGTTCGTTTCTTGAGAGAACACCGCTCAGAATGGGCCGATTTCAACATTGATGCATACTCTGCAGCAACCCTTAAAGCCAATTCATACGCATATCCAGGGATGAGACCCACAAGGTTTACTGGTAGTCAAATTATCATGCCACTCGGCCACACAATCGAGCATGAAGAGTTCCTTGAAGTTATTCGACTTGAAGGACATCCTATGGTACAAGAAGATGCTTTTGTTTCGAGGGACATTCATCTTCTTCAGATATGTAGTGGAATTGATGAGAATGCTGTAGGAGCCTGTTCAGAACTCATTTTTGCCCCAATTGATGAGATGTTTCCAGACGATGCTCCATTGCTTCCTTCTGGCTTTCGAATCATCCCATTGGATTCCAGAACAAGTGATCCTAAAGGTACGATGACTACACAACGGACCCTGGATCTAACATCGAGCCTTGAAGTGGGTTCTGGAACAAGCAATGCTGCTGGAGATGCATCGACAAGTCAGAGCCCTAGATCAGTGTTAACTATCGCATTCCAGTTTCCTTTCGAAAGCAGCATGCAGGATAACGTAGCAAACATGGCTCACCAGTACGTACGTAGTGTCATTTCCTCGGTGCAGAGAGTTGCGATGGCCATATCTCCTTCTGGGGGCAGTCCAGCACTGGGTCCAAAGCTGTCTCCTGGTTCTCCAGAAGCTCTCACTCTTGCACATTGGATATGCAAGAGTTATAGTTACCAAATGGGAACGGAGTTGATCAGGTCAGATTCCTTGGAGAGTGATTCCCTATTGAAAAATCTCTGGAATCATCAGGATGCAATATTGTGCTGTTCGTTGAAGCAGTCACTACCTGTTTTCATGTTTGCCAACCAAGCTGGGCTTGACATGTTGGAAACAACTCTAGTAGCCTTACAAGACATCACATTGGATAAGATTTTCGACGAGGCGGGTCGCAAAGCCTTGTGTTCTGATTTCCCAAAGTTAATGCAGCAGGGATTTGCATACTTGCCTGGAGGAATCTGTGCATCAACAATGGGGCGACACGTTTCGTACGAACAAGCCATTGCATGGAAAGTCCTCGAGGCAGACGAAACGACAGTACACTGCCTTGCCTTCTCGTTCATAAACTGGTCTTTTGTTTGA 2535 46.79 MAMAIAHHRESSSGSITRHLDSTGKYVRYTSEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLNAMNKLLMEENDRLQKQVSQLVCENGFMRQQLQTVPAATTDASCDSVVTTPQPSRRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCGGVAARACGLVSLEPSKIAEILKDRPSWFRDCRSLEVFTMFPAGNGGTIELVYTQVYAPTTLAPARDFWTLRYTITLENGSLVVCERSLSGSGAGPSAAAAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWNVPEVLRPLYESSKVVAQKMTIAALRYVRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDNGWSLINCEGAEDVVLAVNSTKNLGTTSNPANSLTYPGGVLCAKASMLLQNVPPAVLVRFLREHRSEWADFNIDAYSAATLKANSYAYPGMRPTRFTGSQIIMPLGHTIEHEEFLEVIRLEGHPMVQEDAFVSRDIHLLQICSGIDENAVGACSELIFAPIDEMFPDDAPLLPSGFRIIPLDSRTSDPKGTMTTQRTLDLTSSLEVGSGTSNAAGDASTSQSPRSVLTIAFQFPFESSMQDNVANMAHQYVRSVISSVQRVAMAISPSGGSPALGPKLSPGSPEALTLAHWICKSYSYQMGTELIRSDSLESDSLLKNLWNHQDAILCCSLKQSLPVFMFANQAGLDMLETTLVALQDITLDKIFDEAGRKALCSDFPKLMQQGFAYLPGGICASTMGRHVSYEQAIAWKVLEADETTVHCLAFSFINWSFV 844
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1908925 1916117 - Tan0020324.2 Tan05g0251 751559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0251 844 Coils Coil 80 121 - -
Tan05g0251 844 Pfam START domain 164 372 IPR002913 GO:0008289(InterPro)
Tan05g0251 844 Pfam Homeodomain 25 83 IPR001356 GO:0003677(InterPro)
Tan05g0251 844 CDD homeodomain 25 85 IPR001356 GO:0003677(InterPro)
Tan05g0251 844 SUPERFAMILY Homeodomain-like 23 87 IPR009057 -
Tan05g0251 844 Gene3D - 19 91 - -
Tan05g0251 844 ProSiteProfiles 'Homeobox' domain profile. 20 84 IPR001356 GO:0003677(InterPro)
Tan05g0251 844 SMART START_1 163 373 IPR002913 GO:0008289(InterPro)
Tan05g0251 844 SMART HOX_1 22 88 IPR001356 GO:0003677(InterPro)
Tan05g0251 844 CDD bZIP 77 116 - -
Tan05g0251 844 FunFam Homeobox-leucine zipper protein REVOLUTA 25 80 - -
Tan05g0251 844 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 19 844 IPR044830 GO:0003700(InterPro)
Tan05g0251 844 SUPERFAMILY Bet v1-like 163 375 - -
Tan05g0251 844 MobiDBLite consensus disorder prediction 598 632 - -
Tan05g0251 844 CDD START_ArGLABRA2_like 158 374 - -
Tan05g0251 844 MobiDBLite consensus disorder prediction 595 632 - -
Tan05g0251 844 ProSiteProfiles START domain profile. 154 382 IPR002913 GO:0008289(InterPro)
Tan05g0251 844 Pfam MEKHLA domain 699 843 IPR013978 -
Tan05g0251 844 Gene3D - 200 378 IPR023393 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2779 Tan-Chr3:80801218 Tan05g0251 Tan-Chr5:1908925 0.00E+00 dispersed
Tan05g0251 Tan-Chr5:1908925 Tan08g1178 Tan-Chr8:27536019 0.00E+00 dispersed
Tan05g0250 Tan-Chr5:1908925 Tan05g0251 Tan-Chr5:1908925 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27389 PF01852 START 4.20E-46 CL0209 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0251 K09338 - csv:101215773 1612.82