Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan05g0256 | ATGGTTTTGCTAATGCGTAGCCGAGCAACCCGAATTCCGAGCCAAAGACTACCAAGACCCGCCCCCGCCCCTCTCATCGATCCCAACGAGCTCACCCAATGGTCCCTCTACCGAGCCACCATCGCCGAGTTCATCGCCACTCTCCTCTTCCTCTACGTCACCGTTTTGACCGTCATCGGCTACTCCCACCAAAGCGACCCAACAGTATCTACCGACCCGTGTAACGGTGTCGGCATCCTCGGCATCGCTTGGGCTTTCGGTGGCATGATCTTCATCCTCGTTTACTGCACCGCCGGTATCTCCGGTGGGCACATAAATCCAGCAGTGACTTTTGGGCTGTTTTTGGGGAGGAAGGTGTCTTTGGTTAGGGCTTTGTTGTACATAATTGCTCAGTGTGCGGGTGCAATCTGTGGGTGTGGATTGGTTAAGGCTTTCCAATCGGCGTACTACGTGAGGTATAATGGTGGGGCCAACATGCTTGCCGATGGCTACAACAAAGGCACTGGCTTGGGAGCTGAAATCATCGGTACCTTTGTTCTTGTCTACACTGTCTTCTCTGCCACTGATCCAAAGAGAAACGCTAGAGATTCCCATGTTCCTGTTTTGGCACCACTTCCAATTGGATTTGCAGTGTTCATGGTTCACTTAGCTACAATCCCCATTACTGGAACTGGAATTAACCCAGCTAGAAGTTTTGGAGCTGCTGTCATATTCAACCATGAAAAGGCCTGGGATGACCAATGGATTTTCTGGGTTGGGCCATTTATTGGAGCTGCAATTGCTGCATTTTACCACCAGTATGTGCTCAGAGCTGCCGCCATTAAAGCTCTTGGATCCTTCAGGAGCAACGCTTGA | 855 | 51.11 | MVLLMRSRATRIPSQRLPRPAPAPLIDPNELTQWSLYRATIAEFIATLLFLYVTVLTVIGYSHQSDPTVSTDPCNGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLVRALLYIIAQCAGAICGCGLVKAFQSAYYVRYNGGANMLADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNHEKAWDDQWIFWVGPFIGAAIAAFYHQYVLRAAAIKALGSFRSNA | 284 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 1952043 | 1955078 | + | Tan0008193.1 | Tan05g0256 | 751564 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan05g0256 | 284 | Gene3D | Glycerol uptake facilitator protein. | 23 | 284 | IPR023271 | - | |
Tan05g0256 | 284 | SUPERFAMILY | Aquaporin-like | 29 | 270 | IPR023271 | - | |
Tan05g0256 | 284 | CDD | MIP | 38 | 268 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan05g0256 | 284 | NCBIfam | MIP family channel protein | 42 | 265 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan05g0256 | 284 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 16 | 282 | IPR034294 | GO:0005886(PANTHER)|GO:0015250(PANTHER) | |
Tan05g0256 | 284 | PRINTS | Major intrinsic protein family signature | 123 | 142 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan05g0256 | 284 | PRINTS | Major intrinsic protein family signature | 38 | 57 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan05g0256 | 284 | PRINTS | Major intrinsic protein family signature | 172 | 190 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan05g0256 | 284 | PRINTS | Major intrinsic protein family signature | 86 | 110 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan05g0256 | 284 | PRINTS | Major intrinsic protein family signature | 208 | 230 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan05g0256 | 284 | PRINTS | Major intrinsic protein family signature | 248 | 268 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan05g0256 | 284 | FunFam | Probable aquaporin PIP1-2 | 23 | 284 | - | - | |
Tan05g0256 | 284 | Pfam | Major intrinsic protein | 30 | 265 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Tan05g0256 | 284 | ProSitePatterns | MIP family signature. | 104 | 112 | IPR022357 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g1064 | Tan-Chr3:66869326 | Tan05g0256 | Tan-Chr5:1952043 | 4.70E-102 | dispersed | |
Tan04g0596 | Tan-Chr4:5061882 | Tan05g0256 | Tan-Chr5:1952043 | 5.90E-120 | dispersed | |
Tan05g0256 | Tan-Chr5:1952043 | Tan11g0853 | Tan-Chr11:7002074 | 1.40E-121 | dispersed | |
Tan03g0641 | Tan-Chr3:61657830 | Tan05g0256 | Tan-Chr5:1952043 | 6.50E-11 | transposed | |
Tan07g1628 | Tan-Chr7:67736079 | Tan05g0256 | Tan-Chr5:1952043 | 6.70E-108 | transposed | |
Tan03g1055 | Tan-Chr3:66822569 | Tan05g0256 | Tan-Chr5:1952043 | 1.70E-108 | wgd | |
Tan05g0256 | Tan-Chr5:1952043 | Tan08g1884 | Tan-Chr8:71178168 | 2.30E-116 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan05g0256 | K09872 | - | csv:101215300 | 493.426 |