Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan05g0265 | ATGACCGTAATCGACATCATCTTCCGAGTCGATTCTATTTGCAAGAAATATGAGAAGTATGATGTCGAGAAACAGCGCGAGCTCAATGCTTATGGTGATGATGCCTTTGCTCGCCTCTACGCCGCCGTCGAACATGAGATCGACGCCGCTCTCCAGAAATCTGAGACTGCCTCTACTGAGAAGAATAGGGCTGCTGCTGTTGCCATGAATGCCGAGGTTCGGCGGAAGAAGGCCCGATTGATGGATGAAGTTCCCAAGCTTCGTAAATTGGCTCACAAGAAGGTTAAAGGAGTTCCGAAAGAAGAGCTTGAGGTCAGAGGTGATCTTGTTCTTGCGCTTGAAGAGAGGATTAAAGCGATTCCAGATGGGAGTTCAGCAGCCAAACAATCTGGAGGATGGGCCTCCTCCTCCTCATCTAACAATATCAAATTTGATTCTTCATCAGATGGAAACTTTGAGAGCGACTATTTCCAACAAAGTGAAGAGTCCAGTCAATTTCGACAGGAGTATGAAATGCGGAAGATGAAACAGGACCAAGGTTTGGATATCATATCTGAAGGGTTGGATATGCTGAAAAATCTGGCCCATGATATGAATGAGGAAATGGACAGGCAAGTTCCATTGATTGACGAGATAGACTCAAAGGTAGACAAGGTGACTAATGAAATTAAAAACACCAATGTCAGGCTCAAGCAAACGCTTAATGAGGTAAGATCGAGCCAAAACTTCTGCATCGACATCATTCTTCTCTGTGTAATTCTTGGAATCGCCTCTTACTTGTACAATTTATTGAGCTGA | 798 | 44.36 | MTVIDIIFRVDSICKKYEKYDVEKQRELNAYGDDAFARLYAAVEHEIDAALQKSETASTEKNRAAAVAMNAEVRRKKARLMDEVPKLRKLAHKKVKGVPKEELEVRGDLVLALEERIKAIPDGSSAAKQSGGWASSSSSNNIKFDSSSDGNFESDYFQQSEESSQFRQEYEMRKMKQDQGLDIISEGLDMLKNLAHDMNEEMDRQVPLIDEIDSKVDKVTNEIKNTNVRLKQTLNEVRSSQNFCIDIILLCVILGIASYLYNLLS | 265 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 2002304 | 2004239 | - | Tan0017949.1 | Tan05g0265 | 751573 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan05g0265 | 265 | MobiDBLite | consensus disorder prediction | 123 | 145 | - | - | |
Tan05g0265 | 265 | Pfam | SNARE domain | 208 | 257 | IPR000727 | - | |
Tan05g0265 | 265 | CDD | SNARE_Qc | 176 | 232 | - | - | |
Tan05g0265 | 265 | SUPERFAMILY | SNARE fusion complex | 166 | 231 | - | - | |
Tan05g0265 | 265 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 171 | 233 | IPR000727 | - | |
Tan05g0265 | 265 | Gene3D | - | 171 | 232 | - | - | |
Tan05g0265 | 265 | MobiDBLite | consensus disorder prediction | 128 | 145 | - | - | |
Tan05g0265 | 265 | Coils | Coil | 209 | 236 | - | - | |
Tan05g0265 | 265 | PANTHER | SYNTAXIN | 45 | 251 | IPR045242 | GO:0000149(PANTHER)|GO:0005484(PANTHER)|GO:0006886(PANTHER)|GO:0006906(PANTHER)|GO:0012505(PANTHER)|GO:0016021(PANTHER)|GO:0031201(PANTHER)|GO:0048278(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan05g0265 | Tan-Chr5:2002304 | Tan07g0037 | Tan-Chr7:2413634 | 3.50E-18 | dispersed | |
Tan05g0265 | Tan-Chr5:2002304 | Tan08g1893 | Tan-Chr8:71255838 | 1.40E-96 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan05g0265 | K08506 | - | csv:101211289 | 442.195 |