Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0265 ATGACCGTAATCGACATCATCTTCCGAGTCGATTCTATTTGCAAGAAATATGAGAAGTATGATGTCGAGAAACAGCGCGAGCTCAATGCTTATGGTGATGATGCCTTTGCTCGCCTCTACGCCGCCGTCGAACATGAGATCGACGCCGCTCTCCAGAAATCTGAGACTGCCTCTACTGAGAAGAATAGGGCTGCTGCTGTTGCCATGAATGCCGAGGTTCGGCGGAAGAAGGCCCGATTGATGGATGAAGTTCCCAAGCTTCGTAAATTGGCTCACAAGAAGGTTAAAGGAGTTCCGAAAGAAGAGCTTGAGGTCAGAGGTGATCTTGTTCTTGCGCTTGAAGAGAGGATTAAAGCGATTCCAGATGGGAGTTCAGCAGCCAAACAATCTGGAGGATGGGCCTCCTCCTCCTCATCTAACAATATCAAATTTGATTCTTCATCAGATGGAAACTTTGAGAGCGACTATTTCCAACAAAGTGAAGAGTCCAGTCAATTTCGACAGGAGTATGAAATGCGGAAGATGAAACAGGACCAAGGTTTGGATATCATATCTGAAGGGTTGGATATGCTGAAAAATCTGGCCCATGATATGAATGAGGAAATGGACAGGCAAGTTCCATTGATTGACGAGATAGACTCAAAGGTAGACAAGGTGACTAATGAAATTAAAAACACCAATGTCAGGCTCAAGCAAACGCTTAATGAGGTAAGATCGAGCCAAAACTTCTGCATCGACATCATTCTTCTCTGTGTAATTCTTGGAATCGCCTCTTACTTGTACAATTTATTGAGCTGA 798 44.36 MTVIDIIFRVDSICKKYEKYDVEKQRELNAYGDDAFARLYAAVEHEIDAALQKSETASTEKNRAAAVAMNAEVRRKKARLMDEVPKLRKLAHKKVKGVPKEELEVRGDLVLALEERIKAIPDGSSAAKQSGGWASSSSSNNIKFDSSSDGNFESDYFQQSEESSQFRQEYEMRKMKQDQGLDIISEGLDMLKNLAHDMNEEMDRQVPLIDEIDSKVDKVTNEIKNTNVRLKQTLNEVRSSQNFCIDIILLCVILGIASYLYNLLS 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2002304 2004239 - Tan0017949.1 Tan05g0265 751573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0265 265 MobiDBLite consensus disorder prediction 123 145 - -
Tan05g0265 265 Pfam SNARE domain 208 257 IPR000727 -
Tan05g0265 265 CDD SNARE_Qc 176 232 - -
Tan05g0265 265 SUPERFAMILY SNARE fusion complex 166 231 - -
Tan05g0265 265 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 171 233 IPR000727 -
Tan05g0265 265 Gene3D - 171 232 - -
Tan05g0265 265 MobiDBLite consensus disorder prediction 128 145 - -
Tan05g0265 265 Coils Coil 209 236 - -
Tan05g0265 265 PANTHER SYNTAXIN 45 251 IPR045242 GO:0000149(PANTHER)|GO:0005484(PANTHER)|GO:0006886(PANTHER)|GO:0006906(PANTHER)|GO:0012505(PANTHER)|GO:0016021(PANTHER)|GO:0031201(PANTHER)|GO:0048278(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0265 Tan-Chr5:2002304 Tan07g0037 Tan-Chr7:2413634 3.50E-18 dispersed
Tan05g0265 Tan-Chr5:2002304 Tan08g1893 Tan-Chr8:71255838 1.40E-96 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0265 K08506 - csv:101211289 442.195