Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0297 ATGGACGACTTCTTAGACAATATACCGCACATGGATCTGATGCGTTCCGAGAAGATGACTTTTGTCCAGCTTATCATCCCCGTCGAGTCCGCTCATCGAGCCATTTCGTACCTTGGCGAGCTTGGCATCCTTCAATTTAAAGATTTAAACGTGGAAAAAAGTCCTTTCCAGAGAACCTTTGTTAACCAGGTAAAGCGATGTGCAGAGATGTCAAGGAAGTTACGATTTTTCAAAGATCAAATCAGTAAAGCTGGTGTACTGGCATCTACACGACCAATTCTTCAAGAACATATTGAGCTAGAGGATTTAGAGATACGACTAGCTGATCATGAGCATGAGCTGATTGAAATGAACTCTAACAGTGAGAAACTTCAACAGTCATATAATGAACTTTTAGAATTCAAGATGGTATTGCAAAAGGCAAGTGTCTTTCTGGTGTCCAGTAATAGCCATTCAGTTTCAGAAGAAAGGGAATTGAATGAAAATGTTTTCTTGAATGATAACTATGTTGAGGACGGATCATTACTTGAACAGGAAATGAGACCTGGACCGTCCAGCCAATCTGGTTTGAGATTTATTTGTGGAATTATTTGTAAATCCAAAGTTCTTAGATTTGAAAGGATGCTGTTTCGTGCAACAAGGGGCAATATGCTTTTCAATCAGGCACGAGCAGATGTACAGATCATGGATCCCATATCTACGGAAATGGTCGAGAAAACTGTATTTGTAGTGTTTTTCTCTGGGGAGCAGGCCAGAAATAAAGTTTTAAAGATCTGTGAGGCTTTTGGAGCAAATTGCTATCCTGTTCCTGAAGATATAACCAAACAAAGGCAGATAACTAGAGAAGTTTCATCTCGCCTCACTGAACTTGAAGCCACTTTAGATGCTGGGATCCGCCACCGAAATGAGGCTCTTGCATCAATAGGATTTCACTTGATTAAATGGATGAATATGGTAAGAAGGGAGAAGGCTGTATATGATACATTGAACATGTTGAATTTTGATGTCACCAAAAAATGTCTTGTTGGAGAAGGATGGTGCCCAATCTTTGCAAAAACTCAGATTCAAGAGGCACTGCAACGAGCAACATTTGATAGCAGTTCACAAGTGGGCATAATATTTCATGTGATGGATACGGTTGAATCCCCTCCTACCTATTTTAGAACAAACTGTTTAACAAATGCGTTTCAGGAAATTGTTGATGCCTATGGTGTTGCTAGATATCAAGAAGCAAATCCTGCAGTTTACACTGTTATTACATTTCCATTCCTATTCGCAGTGATGTTTGGGGATTGGGGTCATGGAATATGCTTGTTGCTTGGCGCTTTATTTCTTATAGCTCGTGAAAGTAAGCTCAATAATCAGAAATTAGGAAGCTTTATGGAGATGCTATTTGGTGGACGCTATGTTCTTCTTTTGATGTCCCTATTTTCAATTTATTGTGGGTTAATCTACAATGAGTTCTTCTCTGTTCCGTATCATATATTTGGTGCATCTGCTTACAAGTGTCGAGATAATTCATGCAGTGATGCACACACTGTTGGGTTAGTTAAATACCGTGATCCCTATCCATTTGGTGTTGACCCGAGTTGGCGTGGAAGTCGTTCAGAACTTCCTTTTCTGAACTCTCTTAAAATGAAGATGTCTATCTTGTTGGGTATTGCCCAAATGAACTTAGGGATCATATTGAGTTATTTTAATGCACGTTTTACTGGAAGCTCAATTGATATCAGGTACCAGTTTGTACCGCAAGTGATCTTTCTTAACAGCCTTTTTGGATATCTTTCTCTTCTCATTGTCATCAAGTGGTGCACTGGATCTCAAGCGGACCTCTACCATGTGATGATTTACATGTTTTTAAGCCCATTTGATGATCTTGGTGAGAACGAATTGTTTTGGGGCCAAAGACCTCTTCAAATTATCTTGTTGATGTTGGCTATAGTTGCAGTGCCTTGGATGCTTTTTCCTAAACCCTTTATTTTGAAAAAGATTCACACAGAGAGATTTCAAGGTCGTACTTATGGGATGCTTGGAACCTCTGAGATAGATCTTGAGGTGGAACCTGATTCAGCAAGGCAACACCAGGAGGACTTCAATTTTAGTGAAATCTTTGTTCACCAAATGATTCACTCCATAGAATTTGTCTTGGGTGCAGTTTCAAATACAGCATCGTATCTTCGACTTTGGGCTTTAAGCTTGGCGCACTCAGAACTGTCAACAGTTTTCTATGAGAAAGTACTTCTCCTAGCTTGGGGGTATGACAGCTTTGTCATCCGGCTGATTGGTTTAGCTGTTTTTTCCTTTGCCACTGCTTTCATACTTCTTATGATGGAGACCCTTAGTGCCTTCCTTCATGCCTTACGTCTTCATTGGGTTGAGTTCCAAAATAAGTTCTACCATGGCGATGGCTACAAGTTCAAACCCTTTTCCTTTGCCTCCATCAATGAGGATGAAGATTAA 2460 40.0 MDDFLDNIPHMDLMRSEKMTFVQLIIPVESAHRAISYLGELGILQFKDLNVEKSPFQRTFVNQVKRCAEMSRKLRFFKDQISKAGVLASTRPILQEHIELEDLEIRLADHEHELIEMNSNSEKLQQSYNELLEFKMVLQKASVFLVSSNSHSVSEERELNENVFLNDNYVEDGSLLEQEMRPGPSSQSGLRFICGIICKSKVLRFERMLFRATRGNMLFNQARADVQIMDPISTEMVEKTVFVVFFSGEQARNKVLKICEAFGANCYPVPEDITKQRQITREVSSRLTELEATLDAGIRHRNEALASIGFHLIKWMNMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKTQIQEALQRATFDSSSQVGIIFHVMDTVESPPTYFRTNCLTNAFQEIVDAYGVARYQEANPAVYTVITFPFLFAVMFGDWGHGICLLLGALFLIARESKLNNQKLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPYHIFGASAYKCRDNSCSDAHTVGLVKYRDPYPFGVDPSWRGSRSELPFLNSLKMKMSILLGIAQMNLGIILSYFNARFTGSSIDIRYQFVPQVIFLNSLFGYLSLLIVIKWCTGSQADLYHVMIYMFLSPFDDLGENELFWGQRPLQIILLMLAIVAVPWMLFPKPFILKKIHTERFQGRTYGMLGTSEIDLEVEPDSARQHQEDFNFSEIFVHQMIHSIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDSFVIRLIGLAVFSFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFKPFSFASINEDED 819
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2214522 2224316 + Tan0013312.1 Tan05g0297 751605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0297 819 PANTHER VACUOLAR PROTON ATPASES 11 818 IPR002490 GO:0007035(PANTHER)|GO:0016471(PANTHER)|GO:0033179(InterPro)|GO:0046961(InterPro)|GO:0051117(PANTHER)|GO:1902600(InterPro)
Tan05g0297 819 PIRSF ATP6V0A1 9 819 IPR026028 GO:0000220(InterPro)|GO:0046961(InterPro)
Tan05g0297 819 Coils Coil 93 127 - -
Tan05g0297 819 Pfam V-type ATPase 116kDa subunit family 37 811 IPR002490 GO:0033179(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2028 Tan-Chr2:89566271 Tan05g0297 Tan-Chr5:2214522 2.90E-305 dispersed
Tan05g0297 Tan-Chr5:2214522 Tan02g2027 Tan-Chr2:89566271 3.40E-306 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0297 K02154 - csv:101216514 1603.57