Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0317 ATGGAACCGTTGGAAAAACCACTGCCAAAGTCCTCGCCTCTCGCGCCATTTCCTCGGGACTCTCGAGGATCGCTCGAGGTTTTCAATCCCTCGGCCACTTACTCGTCCCGATCGATCAATTCAATCTCTCGGCCGAACCCGCCCTGGCCCAATTGGGTGGAGCCACGTAGCAGTGCGGAGACGGACTCGGCCAGACTCGGCGCCAAAACGTCGAGTAAAACCGGCGAGGAAATCACGTCATGGATGGCCTTCAAGGACTCGAACCCTTCACCAGAACCCAACTCGCCGCTCGCTCAGACAACCATCTCGGCGATTCTCAGCGACAAATCGCCGCCGAAATCGGCGGACGAAGTGGGCTCCGCCGCCCTACGCGCGGCCGAGTGGGGATTGGTACTGAAAACCGATACGGAGACTGGGAAGCCGCAGGGCGTCGGAGTTCGAACTTCCGGTGGCGATGAACCGAATAACAAACAGGAGAATTCGAGAAGAACTTCGAATAACTCGGTGCGGAGTTCGGGCGACATGTCGGACGATGGGGGAAGAGAAAGGGGGATTCCGAGAGTTTCTGAAGATTTGAAAGACGCTCTGTCGACATTTCAACAAACATTTGTGGTTTCTGATGCTACGAAACCCGATTATCCGATTATGTACGCCAGTGCTGGATTCTTCAAGATGACTGGCTATACATCCAAGGAAGTTATCGGAAGAAATTGTCGATTTTTACAGGGTGCAGATACAGACCCAGAAGATGTGGCCAAAATTCGAGAGGCTTTACAAGCTGGGACAAGTTACTGTGGGAGGTTGTTGAATTACAAGAAAGATGGGACCCCATATTGGAATTTACTTACTATTTCACCTATCAAAGATGATGACGGCAAAGTTCTCAAATTTATTGGAATGCAAGTGGAGGTGAGCAAACACACAGAGGGTTTCAAAGATAAGATGGTCCGTCCCAATGGCTTGCCAGAATCCTTGATTCGTTATGATGCCCGTCAAAAAGACATGGCTACCAGTTCGGTAACGGAGCTTGTGCAGGCGGTGAAAAGGCCTCGGTCTATAAGTGAATCTAGGCCACGGGCTCTAAGTGAATCTATGAACCGTCGGTTAGTCAGAAAATCCGGCGGCGGTGGTGGCGGCAGCGAGGATATATTTGAAGCTGCTATGGTTAGGCGAAAGTCGGAGAGTGCAGCAGCTTCAACTGGACGAAAATTACATGGAGGAAGTAGAAGGTCGATGCAGCGTATCAATGAGCTGCCGGAGAAGAAACCCAAAAAGTTCAGCCGTCGTTCATTTATGGGGATTATGAGGAAAAGTCAATCAAATATTGAAAGCTTTGCCATTGAAGATGGTTCAGACGATGATAATGAGACTGATGACGATGAGAGACCTGACAGTGTCGACGACAAAGTAAGGCAGAGGGAAATGAGGAAGGGTATTGATTTAGCTACTACCCTCGAACGTATAGAGAAAAACTTCGTCATTACCGATCCTAGATTGCCCGACAATCCCATTATATTTGCTTCTGATAGCTTCCTGGAGCTAACCGAGTACAGTAGAGAAGAAATCTTGGGAAGAAATTGCAGATTTCTGCAAGGTCCTGAAACCGATCGAGCGACCGTCAAGAAAATAAGAGATGCAATCGACAACCAAACAGAAGTTACAGTGCAGCTTATTAACTACACGAAAAGCGGTAAGAAGTTTTGGAATTTGTTTCATCTACAACCGATGCGTGACCAGAAGGGAGAAGTCCAGTATTTTATTGGAGTACAACTCGACGGCAGTCAGCATGTCGAACCGCTAAGCAATTGCATACCGGAAAATACTGCAAAAGAGGGCGAAAAATTGATAAAAGAAACTGCAGAAAATGTTGATTTGGCGGCTAGAGAACTTCCCGACGCCAATTTGACACCAGAAGATTTATGGGCAAATCATTCTAAGGTGGTTCAACCAAAACCTCACAGAAAAGACACTCCTTCTTGGAAAGCTATCCAGAAGATTTTAGACAGCGGAGAACGGATAGGACTGAAACATTTCAAGCCAGTTAAACCTTTGGGATCAGGTGATACTGGCAGCGTGCATTTGGTAGAACTGTGTGGGACTGATCAGTATTTTGCAATGAAGGCTATGGATAAGGGTGTTATGCTTAACCGCAACAAGGTGCATAGAGCTTGCGCCGAGAGAGAAATACTGGACACGTTGGATCATCCTTTTCTTCCTGCATTATATGCTTCATTTCAGACAAAAACACATGTTTGTCTTATAACTGATTACTGCCCTGGTGGAGAACTCTTTTTGCTTTTGGACAGACAACCTACAAAGGTCTTAAAGGAAGATGCTGCAAGGTTTTATGCTGCTGAAGTTGTCATCGCATTGGAGTATCTTCACTGTCAAGGGATAATTTACCGGGATCTGAAGCCTGAGAATGTTCTACTCCAAGGCAATGGACACGTGGCCTTGACGGATTTTGACTTGTCATGTTTGACTTCTTGCAAACCTCAGCTTTTGCTTCCAACAATGAATGAAAAGAAAAGGCAATCAAGATCTCAACAGGCTCCGATCTTTATGGCCGAACCTATGCGAGCATCGAACTCATTCGTTGGCACTGAAGAGTACATAGCACCGGAAATTATTACTGGGGCTGGCCATACCAGTGCAGTAGACTGGTGGGCTTTGGGTATCCTTCTATATGAGATGCTCTATGGATACACACCCTTTAGGGGGAAGACAAGGCAAAAAACTTTTGCCAACATTCTTCATAAGGATCTTAAATTTCCCAGAAGTATATCGGCTAGTCTCAATGCAAAGCAGTTAATTTTTAGGTTATTGCATCGAGACCCTAAAAACCGATTGGGTTCTCGAGAAGGAGCTAACGAAATCAAACGACATCCATTCTTCCGAGGCGTCAATTGGGCGCTTGTTCGTTGCATGAATCCTCCTGAGCTCGAAGCGCCTCTTTTCCAGGCCACCGATGCCGAGAAAGATGCTAATAAAGCATTAGATTTTGATCTAAAAGATCTTGAACTCAGTATTTTCTGA 3036 46.38 MEPLEKPLPKSSPLAPFPRDSRGSLEVFNPSATYSSRSINSISRPNPPWPNWVEPRSSAETDSARLGAKTSSKTGEEITSWMAFKDSNPSPEPNSPLAQTTISAILSDKSPPKSADEVGSAALRAAEWGLVLKTDTETGKPQGVGVRTSGGDEPNNKQENSRRTSNNSVRSSGDMSDDGGRERGIPRVSEDLKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFLQGADTDPEDVAKIREALQAGTSYCGRLLNYKKDGTPYWNLLTISPIKDDDGKVLKFIGMQVEVSKHTEGFKDKMVRPNGLPESLIRYDARQKDMATSSVTELVQAVKRPRSISESRPRALSESMNRRLVRKSGGGGGGSEDIFEAAMVRRKSESAAASTGRKLHGGSRRSMQRINELPEKKPKKFSRRSFMGIMRKSQSNIESFAIEDGSDDDNETDDDERPDSVDDKVRQREMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDRATVKKIRDAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLSNCIPENTAKEGEKLIKETAENVDLAARELPDANLTPEDLWANHSKVVQPKPHRKDTPSWKAIQKILDSGERIGLKHFKPVKPLGSGDTGSVHLVELCGTDQYFAMKAMDKGVMLNRNKVHRACAEREILDTLDHPFLPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAARFYAAEVVIALEYLHCQGIIYRDLKPENVLLQGNGHVALTDFDLSCLTSCKPQLLLPTMNEKKRQSRSQQAPIFMAEPMRASNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPRSISASLNAKQLIFRLLHRDPKNRLGSREGANEIKRHPFFRGVNWALVRCMNPPELEAPLFQATDAEKDANKALDFDLKDLELSIF 1011
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2360325 2372195 + Tan0016832.1 Tan05g0317 751625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0317 1011 ProSitePatterns Protein kinases ATP-binding region signature. 684 707 IPR017441 GO:0005524(InterPro)
Tan05g0317 1011 CDD PAS 215 304 IPR000014 -
Tan05g0317 1011 MobiDBLite consensus disorder prediction 26 47 - -
Tan05g0317 1011 Pfam Protein kinase domain 680 965 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0317 1011 MobiDBLite consensus disorder prediction 352 366 - -
Tan05g0317 1011 Gene3D Phosphorylase Kinase; domain 1 677 761 - -
Tan05g0317 1011 Gene3D PAS domain 202 363 - -
Tan05g0317 1011 SMART serkin_6 678 965 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0317 1011 ProSiteProfiles PAS repeat profile. 481 550 IPR000014 -
Tan05g0317 1011 SUPERFAMILY Protein kinase-like (PK-like) 657 986 IPR011009 -
Tan05g0317 1011 FunFam LOV domain-containing protein 677 761 - -
Tan05g0317 1011 MobiDBLite consensus disorder prediction 1 119 - -
Tan05g0317 1011 CDD PAS 492 592 IPR000014 -
Tan05g0317 1011 FunFam LOV domain-containing protein 466 630 - -
Tan05g0317 1011 MobiDBLite consensus disorder prediction 394 431 - -
Tan05g0317 1011 ProSiteProfiles PAC domain profile. 551 605 IPR000700 -
Tan05g0317 1011 MobiDBLite consensus disorder prediction 447 463 - -
Tan05g0317 1011 MobiDBLite consensus disorder prediction 447 473 - -
Tan05g0317 1011 NCBIfam PAS domain S-box protein 215 307 IPR000014 -
Tan05g0317 1011 NCBIfam PAS domain S-box protein 502 592 IPR000014 -
Tan05g0317 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 799 811 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g0317 1011 SMART pas_2 479 548 IPR000014 -
Tan05g0317 1011 SMART pas_2 190 259 IPR000014 -
Tan05g0317 1011 SUPERFAMILY PYP-like sensor domain (PAS domain) 493 592 IPR035965 -
Tan05g0317 1011 FunFam Putative LOV domain-containing protein 202 358 - -
Tan05g0317 1011 SMART pac_2 265 307 IPR001610 -
Tan05g0317 1011 SMART pac_2 554 596 IPR001610 -
Tan05g0317 1011 MobiDBLite consensus disorder prediction 348 382 - -
Tan05g0317 1011 Pfam PAS domain 500 592 IPR000014 -
Tan05g0317 1011 Pfam PAS domain 209 305 IPR000014 -
Tan05g0317 1011 CDD STKc_phototropin_like 676 984 - -
Tan05g0317 1011 MobiDBLite consensus disorder prediction 133 185 - -
Tan05g0317 1011 ProSiteProfiles Protein kinase domain profile. 678 965 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0317 1011 Gene3D PAS domain 465 630 - -
Tan05g0317 1011 PANTHER FLIPPASE KINASE 1-RELATED 633 987 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Tan05g0317 1011 SUPERFAMILY PYP-like sensor domain (PAS domain) 209 301 IPR035965 -
Tan05g0317 1011 MobiDBLite consensus disorder prediction 63 108 - -
Tan05g0317 1011 MobiDBLite consensus disorder prediction 149 174 - -
Tan05g0317 1011 FunFam Putative LOV domain-containing protein 762 977 - -
Tan05g0317 1011 Gene3D Transferase(Phosphotransferase) domain 1 762 976 - -
Tan05g0317 1011 ProSiteProfiles PAC domain profile. 262 316 IPR000700 -
Tan05g0317 1011 ProSiteProfiles PAS repeat profile. 188 259 IPR000014 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0317 Tan-Chr5:2360325 Tan05g1029 Tan-Chr5:8540759 0.00E+00 dispersed
Tan05g0317 Tan-Chr5:2360325 Tan05g1028 Tan-Chr5:8540759 0.00E+00 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67553 PF00069 Pkinase 5.50E-63 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0317 K20715 - csv:101214662 1798.87