Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0329 ATGGATTGTAGAAGAAGATTTGGATTACTCTTCTGGGGTTTGTTTATTTCGTTGCTGCCTTGCATTTCTTGTTTGTTTAATCCGGTTGATAATTATCTCATTGACTGTGGATCGCCTACAAGTGTCTCTGTGGGTAGGCGTGTTTTCGTTGCCGATAATTTGGCCTCAAATTTGCTTTCCACCCCAGAAGTCATTTCGGCTAATACGTCTTCAGTTCCTGCCTCTTCTTTTAATGACTCGTCGCTCTTCAAAACGGCTAGAATATTTACTGGAACATCAAAATTCAAGTTTCCAATCAAAAAGCCTGGAAGGCACTGGATCCGTCTCTATTTCTATCCTTTTGTGTTTTCTAGGTTCAATATGAGTGCTGCAAATTTTAGTGTTTCCACACAAAACTTTGTTCTGTTGAGAGATTTGGTTGTAGAGAAGAATCCTATTGTCAAAGAATTCTCTGTGGATGTAACATCAGATACTCTTGAAGTTGTCTTTGCTCCTGTTAATGGCTCCATTGCATATGTGAATGCCATTGAAGTTGTTTCTGTTCCTGACATCCTCATCCTTGATGAAGCCAATTTGTTAGAACCATCTGGTAAATTGCCAAAGCTGACTACTCTGGCGTATGAGACAGTTGCTAGGGTTAATATGGGTGGGCCAAAAGTTGCTCCTGATGATGATCCTCTTACACGAAGTTGGGTTTCTGATGGAAGCTTTCTAGTTATTAAGAATTCTGCAACAAATTTCTCTAACATTCCAGCTGTTAAATACAGTCCTGAAGGGGCAGCGCCGGAGATTGCTCCAAATGTTGTTTATGGTACCCTTGTGGAGATGAATTCGAAGGATGATCCGGACAGCAATTTCAATGTGACATGGAAGTTTAAAGTGGATCCTGAGTTTCAGTACCTTGTTCGGTTTCACTTTTGTGACATTGTGAGCAAATCTCTACACCAACTTTATTTCAATGTTTACGTTGACTCGTGGCTGGTTACTCGGGATCTAGATCTTAGCGTTCCTCTTAGTAGTGCCCTGGGTACTCCATACTATATGGACTCTGTTACAGGATTGATCAAGAATGACGTACTTTTTGTGAGTATTGGCCCATCAAATTTAGCCAATGTGTATCCAAATGCCATTTTAAATGGTCTGGAAATCATGAAAATGAACAACTCTGTTGGCAGTCTCAGTGGAGAAGATTTCGTAATTAGTTTTCCAGACTCAACAAATAAGCACGTTGGCATCATTGTGGGTGTGAGCGTCGGGGCATTTGTTGCAGCTATATTGGCTGGCATTCTGTTTATGCTGCACAGACGAAAAAGAAAGGGAATGCATCAAGCTCCATCGAAAACGTGGATTTCAATATCCACTGCTGGGGGAATGTCTCACACTATGGGAAGTAAATACTCAAATGGCACAATCACAAGTGCTGCTTCCAACTATGGGTACCGGATACCTTTTGCAACAGTTCAAGAGGCTACAAATAACTTTGATGAGAGCCTGGTTATTGGTATCGGTGGGTTTGGAAAAGTATACAAAGGAGTTTTAAATGATGGCACTAAAGTTGCTGTGAAGAGAGGTAATCCACGTTCGCAACAAGGACTGACGGAGTTTCTAACTGAAATTGAGATGCTATCACAGTTCCGTCATCGTCATCTTGTTTCATTGATTGGGTACTGTGATGAGAGGAATGAGATGATACTGATTTATGAGTATATGGAACAGGGAACCATGAAGAGTCATCTATATGGTTCTGATTTCCCTAGTTTGAGCTGGAAGGAGAGGCTTGAGATTTGCATCGGGGCTGCTAGAGGACTTCATTACCTCCATACTGGTTATGCCAAACCAGTTATTCATCGTGATGTGAAGTCTGCTAATATTTTACTCGACGAAAACCTCATGGCGAAGGTTGCTGACTTTGGGCTTTCAAAGACAGGACCTGAACTTGACCAAACCCATGTAAGTACAGCTGTGAAGGGAAGTTTTGGATACCTTGATCCTGAATATTTCAGGAGGCAACAACTGACTGAGAAATCAGATGTTTATTCTTTTGGAGTTGTTTTGTTTGAAGTCCTTTGTGCAAGACCTGTCATAGATCCAACCCTTCCTAGAGAAATGGTAAACTTGGCTGAATGGGTAATGAAATGGCAGAAGAGAGGGCAGTTGGACCAAATCATTGATTCTACTCTAGTAGGAAAAATTAGACCAGCTTCTCTTAGGAAGTTTGGAGAAACTGCTGAACAATGCTTGGCTGACTATGGAGTTGACAGGCCATCTATGGGAGATGTGTTATGGAATTTGGAGTACGCGCTTCAGCTACAAGAAGCTGTTGTTGAAGTCGATCCAGAAGATAACAGTACAAATATGATTGACGAGCTCTCTCCACAAATTAACAATTTCAATGATATCGAGACAGGTGCTTCTGCCACACGGTTTGACAATTTGGGTGTGGATGATCTTTCTGGAGTCTCCATGAGTAAGGTGTTCTCTCAGCTGGTGAAATCTGAGGGTAGATGA 2508 41.55 MDCRRRFGLLFWGLFISLLPCISCLFNPVDNYLIDCGSPTSVSVGRRVFVADNLASNLLSTPEVISANTSSVPASSFNDSSLFKTARIFTGTSKFKFPIKKPGRHWIRLYFYPFVFSRFNMSAANFSVSTQNFVLLRDLVVEKNPIVKEFSVDVTSDTLEVVFAPVNGSIAYVNAIEVVSVPDILILDEANLLEPSGKLPKLTTLAYETVARVNMGGPKVAPDDDPLTRSWVSDGSFLVIKNSATNFSNIPAVKYSPEGAAPEIAPNVVYGTLVEMNSKDDPDSNFNVTWKFKVDPEFQYLVRFHFCDIVSKSLHQLYFNVYVDSWLVTRDLDLSVPLSSALGTPYYMDSVTGLIKNDVLFVSIGPSNLANVYPNAILNGLEIMKMNNSVGSLSGEDFVISFPDSTNKHVGIIVGVSVGAFVAAILAGILFMLHRRKRKGMHQAPSKTWISISTAGGMSHTMGSKYSNGTITSAASNYGYRIPFATVQEATNNFDESLVIGIGGFGKVYKGVLNDGTKVAVKRGNPRSQQGLTEFLTEIEMLSQFRHRHLVSLIGYCDERNEMILIYEYMEQGTMKSHLYGSDFPSLSWKERLEICIGAARGLHYLHTGYAKPVIHRDVKSANILLDENLMAKVADFGLSKTGPELDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNLAEWVMKWQKRGQLDQIIDSTLVGKIRPASLRKFGETAEQCLADYGVDRPSMGDVLWNLEYALQLQEAVVEVDPEDNSTNMIDELSPQINNFNDIETGASATRFDNLGVDDLSGVSMSKVFSQLVKSEGR 835
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2469201 2473155 - Tan0015142.1 Tan05g0329 751637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0329 835 CDD STKc_IRAK 500 765 - -
Tan05g0329 835 ProSitePatterns Protein kinases ATP-binding region signature. 500 522 IPR017441 GO:0005524(InterPro)
Tan05g0329 835 Gene3D - 205 388 - -
Tan05g0329 835 Gene3D - 31 181 - -
Tan05g0329 835 SMART serkin_6 494 767 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0329 835 FunFam Receptor-like protein kinase FERONIA 570 785 - -
Tan05g0329 835 SUPERFAMILY Protein kinase-like (PK-like) 471 765 IPR011009 -
Tan05g0329 835 FunFam receptor-like protein kinase FERONIA 458 569 - -
Tan05g0329 835 FunFam Putative receptor-like protein kinase 31 182 - -
Tan05g0329 835 ProSiteProfiles Protein kinase domain profile. 494 767 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan05g0329 835 Pfam Protein tyrosine and serine/threonine kinase 499 690 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g0329 835 Gene3D Phosphorylase Kinase; domain 1 457 569 - -
Tan05g0329 835 Pfam Malectin-like domain 34 385 IPR024788 -
Tan05g0329 835 PANTHER OS07G0166700 PROTEIN 481 772 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Tan05g0329 835 FunFam Receptor-like protein kinase FERONIA 206 388 - -
Tan05g0329 835 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan05g0329 835 Gene3D Transferase(Phosphotransferase) domain 1 570 789 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0205 Tan-Chr1:1832129 Tan05g0329 Tan-Chr5:2469201 1.50E-205 dispersed
Tan04g0002 Tan-Chr4:110126 Tan05g0329 Tan-Chr5:2469201 3.30E-163 dispersed
Tan04g0353 Tan-Chr4:2992192 Tan05g0329 Tan-Chr5:2469201 3.80E-228 dispersed
Tan05g0329 Tan-Chr5:2469201 Tan09g2091 Tan-Chr9:71283374 5.90E-213 dispersed
Tan06g1999 Tan-Chr6:64088227 Tan05g0329 Tan-Chr5:2469201 2.80E-63 dispersed
Tan05g0329 Tan-Chr5:2469201 Tan06g0330 Tan-Chr6:2602063 2.30E-196 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67554 PF12819 Malectin_like 1.50E-30 CL0202 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0329 - - - 0.0