Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0340 ATGCCGCAAAAGGGAATGAGGAGTGTCTTCTTCAAATCTCCAACTTCTTCTTCTATACCGAGCACGCCGTCCCACCCCACTTTATCGGATTCTATGGTGGAAGAGAATATCGAAGTTGCAGAATCGTTTCTGGCGAGGTGGAGACCTGATTCTGTCACTGCTGGTTCTTTGTTTCAAGGGGATGACCGTGAGGAAGCTCGGCAGTTTATCAAAGCGGTGAAGAATTTGCATGCTGCCATGCACTGCCTTGCTTCTCGGGATTCGTCCTCGGAGAAGCTCGTGCGTGCTCATGATTTGATGAGGATTTCCATGGAGAGGCTTCAGAAAGAGTTTTACCAGATTTTGTCTGTGAATCGGGAGTATCTGTATCCGGAATCTGTTTCCAGCGTCCAATCGCCGATTACGGTTTCGGCTAGATCGAGTGTTTCTGATTTTGAAGTGGAATCGGAAGATGAGTTCCGGTTTGCTAACGAATCCATTGCTGAGGTTGAGCGAGTTTCGATGTCGGCCATGGCGGATTTGAAAGCAATTGCAGATTGTATGATCTCAACTGGCTATGGCAAAGAATGCGTGAAGGTTTATAAAATTGTGAGGAAATCGATTATTGACGAGAGTCTCTACAATCTAGGGATTGAGAAATTGAGTTTTGCGAAAGTTCAGAAGATGGATTGGGAAGTTCTTGAGATCAAAATCAAAATCTGGTTGAAAGGTGTGAAAACCGCAGTGAAATCTCTGTTCGAAGGAGAGAGAATCCTTTGCGATCACGTTTTCTCAGCTTCCGTTCCCATCAGAGAATCATGCTTCGCGCAAATTTCCAAGGACGGTGCGACGATGCTGTTTGGATTTCCAGAATTGGTTGCAAAATACAAAAAAACTCCTGAGAAAATTTTCATTACTCTAGACCTATACGAAGCCATAGCCGACCTCTGGCCGGAGATCAATTACATTTTCTCATCCACAGCAACATCAATGGTACAGTCTCAAGCCGTCAATTCACTAATCAAACTCGGAGAGAACATTCGCACATTAATCACCGACTTCGAAATGGCTATTCAGAAAGAATCATCGAAAACGCCTGTTCCTAGAGGCGGAGTTCATCCACTCACTCGCTACGTGATGAACTATATCTCGTTTCTCTCCGATTACAGTGGAATACTCAACGACATTGTTGCCGATTGGCCTCTAGCAACAAAATTACCAATGCCAGAATCATACTACGGAACGCCAAAGGAAGATGATAGTCCGATTACCTTACGTTTCGCTTGGTTGATCCTCGTCCTCCTCTGCAAACTCGACGGAAAAGCAGAGCATTACAACGACGTCGCTCTCTCGTACTTGTTCTTGGCGAATAATCTCCGGTACGTCGTCAACAAAGTCCGCAACTCAAATTTGAGATTCCTCCTCGGCAGTGAGTGGATTGAGAGGCACGAATCGAAGATCGAACTCTACTCCTCCAAGTACAGACGCATTGGATGGAGTGGAGTGTTCTCATCGCTGCCGGCGGACGCCACGGCGGAGATATCGCCGGAGGATGCGAGAGAATCGTTCAGAAATTTCAACAGAGCTTTTGAAGACGCTTACAGAAAACAGTCCTCCTGGATCGTGCCGGATCAGAAGCTTCGCGATGAAATAAAGATCTCGTTGGCAAAGGAGCTTGGGGCTTTATACGGCGAGTTTTACGCGAGGAATCGGGTTCGTGCGAGGCGGGTTTCTGGGTCGGATCAAGTGGTCCGACTTTCCCCTGATGATTTGGGTAATTATTTATCGGATCTTTTTTACGGGTCTGGATCCGACAGTGTAGGGAGCGGGTCCACGTCTTCTTCATCGTCCCATTCCTCGCCGTCTTCTCGAGGGAGATTTGTCCGTTGA 1869 46.87 MPQKGMRSVFFKSPTSSSIPSTPSHPTLSDSMVEENIEVAESFLARWRPDSVTAGSLFQGDDREEARQFIKAVKNLHAAMHCLASRDSSSEKLVRAHDLMRISMERLQKEFYQILSVNREYLYPESVSSVQSPITVSARSSVSDFEVESEDEFRFANESIAEVERVSMSAMADLKAIADCMISTGYGKECVKVYKIVRKSIIDESLYNLGIEKLSFAKVQKMDWEVLEIKIKIWLKGVKTAVKSLFEGERILCDHVFSASVPIRESCFAQISKDGATMLFGFPELVAKYKKTPEKIFITLDLYEAIADLWPEINYIFSSTATSMVQSQAVNSLIKLGENIRTLITDFEMAIQKESSKTPVPRGGVHPLTRYVMNYISFLSDYSGILNDIVADWPLATKLPMPESYYGTPKEDDSPITLRFAWLILVLLCKLDGKAEHYNDVALSYLFLANNLRYVVNKVRNSNLRFLLGSEWIERHESKIELYSSKYRRIGWSGVFSSLPADATAEISPEDARESFRNFNRAFEDAYRKQSSWIVPDQKLRDEIKISLAKELGALYGEFYARNRVRARRVSGSDQVVRLSPDDLGNYLSDLFYGSGSDSVGSGSTSSSSSHSSPSSRGRFVR 622
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2551565 2553888 - Tan0010886.1 Tan05g0340 751648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0340 622 MobiDBLite consensus disorder prediction 9 29 - -
Tan05g0340 622 MobiDBLite consensus disorder prediction 596 622 - -
Tan05g0340 622 Pfam Exocyst complex component Exo70 N-terminal 37 116 - -
Tan05g0340 622 FunFam Exocyst subunit Exo70 family protein 53 599 - -
Tan05g0340 622 Pfam Exo70 exocyst complex subunit C-terminal 233 590 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Tan05g0340 622 MobiDBLite consensus disorder prediction 1 29 - -
Tan05g0340 622 Gene3D Exocyst complex component Exo70 51 599 - -
Tan05g0340 622 SUPERFAMILY Cullin repeat-like 56 592 IPR016159 -
Tan05g0340 622 PANTHER EXOCYST COMPLEX PROTEIN EXO70 33 594 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(PANTHER)|GO:0006887(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2524 Tan-Chr1:34981648 Tan05g0340 Tan-Chr5:2551565 9.10E-190 dispersed
Tan04g0347 Tan-Chr4:2842484 Tan05g0340 Tan-Chr5:2551565 8.80E-147 dispersed
Tan05g0340 Tan-Chr5:2551565 Tan09g2370 Tan-Chr9:73415933 5.60E-91 dispersed
Tan03g1000 Tan-Chr3:66417460 Tan05g0340 Tan-Chr5:2551565 2.30E-118 wgd
Tan05g0340 Tan-Chr5:2551565 Tan08g1964 Tan-Chr8:71770631 2.50E-176 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0340 K07195 - csv:101212978 1055.05