Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0358 ATGACAAAGGGTCCTGGACATGAAAATGATGCAAATTCAACTTTCAACAGCCCGTCATTATTGGACACAAAGCGGGCACATCAGTGGTTTATAGATGGTTGTGAGGGACAGGTTTTCCCCAACAAGAAGCAAGCAATTCAAGCTCCAGATAGTAAAATGACTGGAGCACTGTCAAATGTGAACGTTCTTCATTGGGAGCAGCACCCTGCTAATTATCAGTCGGTTTCACATCAACTTATTGGTCGCATATTTGGACCAGAATCAGTGAGGTCTGCTGACTTTGATCTAACAAAAGCATCTTCTGTAATTCCTGATAATTTTGGTCTCAGGAGAAAAGGTATGGAAGACCAATTTGGAGAGGATCCATCTGTGGGGTTGTCTATATCTCATGGTAGGGAGGATCCTGAAACATCTCTTAGCTATGGGGGAATTAGAAAAGTGAAAATCAACCAGGTTAAAGATAATATACATGGTCTGCAACCATGTCTAAGAAATAATTCTAATAGAGAAGATGGTGGCCAACTATCCATAGAAGGTTACTATAAGGAAATTGAATCAGGTCTTGCATCTGTGGGATCAGCCTATATTAAGGAGGACGATAGTTTCAATTTGATAAATCAAACCTCCAATGATGGGGATCGCCATATTGGGTTTATAAGTCATAGCGGGAAGATAGATGACAATGTTGTCTCCATTGATGATGATTACAATAAGCGGGATCCAAATATAATTTCATTTGGTGGATTTCCTGATGAGCAAGATCTTATCTCTTTAGGCAGGTCTCTTGGAAGTCATGACCCAACTTTCTACGAATCTTCATTCCAACCATCTGAAGTTATTGGTCTCACAGATCTGGAATCATCAAATTTTGATGTAGCTGTAAGCAGTACTCAGATAGCTAAGCAAAAGCTTGATACGACATCGAAGAGTAGACCAGAATACAAAATGAGGAAAGAAGCTCCAAACAGCTTTCCTTCGAATGTTAGAAGTTTGATATCAACCGGTATGCTCGATGGTGTTCCTGTGAAGTATGTCTCCATAGCCAGAGAGGAGCTTCGTGGAATTATAAGGGGATCTGGCTATCTTTGTGGATGCCAATCTTGCAACTTTTCCAAGATGCTTAATGCTTATGAGTTTGAGCGGCATGCTGGCTGCAAAACAAAACACCCAAATAACCATATATACTTTGAGAATGGGAAGACTATTTACCAGATAGTACAAGAATTAAGAAGCACTCCTGAGAGCTTGTTGTTTGATACTATTCAAACCATCTTTGGTGCCCCTATCAATCAGAAATCTTTTCGGATTTGGAAAGAATCATTTCAAGCGGCTACCCGTGAGCTTCAACGCATATATGGCAAGGATGAACTTAACCTTTAG 1380 40.22 MTKGPGHENDANSTFNSPSLLDTKRAHQWFIDGCEGQVFPNKKQAIQAPDSKMTGALSNVNVLHWEQHPANYQSVSHQLIGRIFGPESVRSADFDLTKASSVIPDNFGLRRKGMEDQFGEDPSVGLSISHGREDPETSLSYGGIRKVKINQVKDNIHGLQPCLRNNSNREDGGQLSIEGYYKEIESGLASVGSAYIKEDDSFNLINQTSNDGDRHIGFISHSGKIDDNVVSIDDDYNKRDPNIISFGGFPDEQDLISLGRSLGSHDPTFYESSFQPSEVIGLTDLESSNFDVAVSSTQIAKQKLDTTSKSRPEYKMRKEAPNSFPSNVRSLISTGMLDGVPVKYVSIAREELRGIIRGSGYLCGCQSCNFSKMLNAYEFERHAGCKTKHPNNHIYFENGKTIYQIVQELRSTPESLLFDTIQTIFGAPINQKSFRIWKESFQAATRELQRIYGKDELNL 459
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2652497 2655956 + Tan0016393.2 Tan05g0358 751666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0358 459 Pfam Tify domain binding domain 354 409 IPR032308 -
Tan05g0358 459 PANTHER AUTOIMMUNE REGULATOR 23 443 - GO:0000977(PANTHER)|GO:0003682(PANTHER)|GO:0005634(PANTHER)|GO:0042393(PANTHER)|GO:0045944(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0358 Tan-Chr5:2652497 Tan05g0360 Tan-Chr5:2652497 1.20E-271 dispersed
Tan05g0357 Tan-Chr5:2652497 Tan05g0358 Tan-Chr5:2652497 6.40E-204 tandem
Tan05g0358 Tan-Chr5:2652497 Tan05g0359 Tan-Chr5:2652497 1.20E-271 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0358 - - - 0.0