Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan05g0359 ATGAACAAAGGTTTTTGGATGACAAAGGGTCCTGGACATGAAAATGATGCAAATTCAACTTTCAACAGCCCGTCATTATTGGACACAAAGCGGGCACATCAGTGGTTTATAGATGGTTGTGAGGGACAGGTTTTCCCCAACAAGAAGCAAGCAATTCAAGCTCCAGATAGTAAAATGACTGGAGCACTGTCAAATGTGAACGTTCTTCATTGGGAGCAGCACCCTGCTAATTATCAGTCGGTTTCACATCAACTTATTGGTCGCATATTTGGACCAGAATCAGTGAGGTCTGCTGACTTTGATCTAACAAAAGCATCTTCTGTAATTCCTGATAATTTTGGTCTCAGGAGAAAAGGTATGGAAGACCAATTTGGAGAGGATCCATCTGTGGGGTTGTCTATATCTCATGGTAGGGAGGATCCTGAAACATCTCTTAGCTATGGGGGAATTAGAAAAGTGAAAATCAACCAGGTTAAAGATAATATACATGGTCTGCAACCATGTCTAAGAAATAATTCTAATAGAGAAGATGGTGGCCAACTATCCATAGAAGGTTACTATAAGGAAATTGAATCAGGTCTTGCATCTGTGGGATCAGCCTATATTAAGGAGGACGATAGTTTCAATTTGATAAATCAAACCTCCAATGATGGGGATCGCCATATTGGGTTTATAAGTCATAGCGGGAAGATAGATGACAATGTTGTCTCCATTGATGATGATTACAATAAGCGGGATCCAAATATAATTTCATTTGGTGGATTTCCTGATGAGCAAGATCTTATCTCTTTAGGCAGGTCTCTTGGAAGTCATGACCCAACTTTCTACGAATCTTCATTCCAACCATCTGAAGTTATTGGTCTCACAGATCTGGAATCATCAAATTTTGATGTAGCTGTAAGCAGTACTCAGATAGCTAAGCAAAAGCTTGATACGACATCGAAGAGTAGACCAGAATACAAAATGAGGAAAGAAGCTCCAAACAGCTTTCCTTCGAATGTTAGAAGTTTGATATCAACCGGTATGCTCGATGGTGTTCCTGTGAAGTATGTCTCCATAGCCAGAGAGGAGCTTCGTGGAATTATAAGGGGATCTGGCTATCTTTGTGGATGCCAATCTTGCAACTTTTCCAAGATGCTTAATGCTTATGAGTTTGAGCGGCATGCTGGCTGCAAAACAAAACACCCAAATAACCATATATACTTTGAGAATGGGAAGACTATTTACCAGATAGTACAAGAATTAAGAAGCACTCCTGAGAGCTTGTTGTTTGATACTATTCAAACCATCTTTGGTGCCCCTATCAATCAGAAATCTTTTCGGATTTGGAAAGAATCATTTCAAGCGGCTACCCGTGAGCTTCAACGCATATATGGCAAGGATGAACTTAACCTTTAG 1398 40.13 MNKGFWMTKGPGHENDANSTFNSPSLLDTKRAHQWFIDGCEGQVFPNKKQAIQAPDSKMTGALSNVNVLHWEQHPANYQSVSHQLIGRIFGPESVRSADFDLTKASSVIPDNFGLRRKGMEDQFGEDPSVGLSISHGREDPETSLSYGGIRKVKINQVKDNIHGLQPCLRNNSNREDGGQLSIEGYYKEIESGLASVGSAYIKEDDSFNLINQTSNDGDRHIGFISHSGKIDDNVVSIDDDYNKRDPNIISFGGFPDEQDLISLGRSLGSHDPTFYESSFQPSEVIGLTDLESSNFDVAVSSTQIAKQKLDTTSKSRPEYKMRKEAPNSFPSNVRSLISTGMLDGVPVKYVSIAREELRGIIRGSGYLCGCQSCNFSKMLNAYEFERHAGCKTKHPNNHIYFENGKTIYQIVQELRSTPESLLFDTIQTIFGAPINQKSFRIWKESFQAATRELQRIYGKDELNL 465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2652497 2655956 + Tan0016393.3 Tan05g0359 751667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan05g0359 465 Pfam Tify domain binding domain 360 415 IPR032308 -
Tan05g0359 465 PANTHER AUTOIMMUNE REGULATOR 1 449 - GO:0000977(PANTHER)|GO:0003682(PANTHER)|GO:0005634(PANTHER)|GO:0042393(PANTHER)|GO:0045944(PANTHER)
Tan05g0359 465 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0317 Tan-Chr4:2575674 Tan05g0359 Tan-Chr5:2652497 1.90E-80 dispersed
Tan05g0357 Tan-Chr5:2652497 Tan05g0359 Tan-Chr5:2652497 2.50E-208 dispersed
Tan05g0359 Tan-Chr5:2652497 Tan08g1981 Tan-Chr8:71900761 2.20E-39 dispersed
Tan05g0358 Tan-Chr5:2652497 Tan05g0359 Tan-Chr5:2652497 1.20E-271 tandem
Tan05g0359 Tan-Chr5:2652497 Tan05g0360 Tan-Chr5:2652497 3.60E-276 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan05g0359 - - - 0.0