Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan05g0383 | ATGGCAGAAGGGGAGGATATTCAGCCACTTGTCTGCGACAATGGAACAGGAATGGTTAAGGCTGGCTTTGCTGGAGATGATGCTCCAAGGGCCGTGTTTCCTAGTATAGTAGGTCGACCAAGGCATACCGGTGTGATGGTTGGCATGGGCCAAAAGGATGCGTATGTTGGGGATGAAGCTCAGTCCAAACGTGGTATATTAACTTTGAAATATCCCATAGAGCATGGTATAGTGAGCAATTGGGATGACATGGAGAAAATTTGGCATCATACCTTCTACAATGAACTCCGAGTGGCTCCTGAAGAGCACCCTGTCCTACTCACTGAAGCCCCTCTGAATCCAAAGGCAAATCGTGAAAAAATGACCCAAATCATGTTCGAGACCTTCAACGCTCCTGCCATGTATGTTGCCATTCAGGCCGTTCTTTCCCTCTACGCTAGTGGACGCACAACTGGTATTGTTTTGGATTCTGGAGATGGTGTCAGTCACACTGTCCCAATTTACGAGGGGTATGCTCTCCCCCATGCCATACTTCGTCTTGACCTCGCTGGCCGTGACCTCACTGATGCCCTTATGAAAATCTTGACTGAACGTGGGTATTCCTTCACCACCACAGCTGAGCGTGAAATTGTGAGGGACGTGAAGGAAAAACTGGCATATATTGCCCTTGACTTCGAGCAAGAACTTGAAACTTCCAAAACTGGTTCATCTGTTGAGAAGAGTTATGAACTTCCAGATGGGCAGGTTATCACAATTGGCGCAGAACGTTTCCGATGTCCTGAAGTTCTTTTCCAGCCTTCAATGATCGGAATGGAAGCTGCAGGCATCCATGAAACAACATATAACTCCATCATGAAATGTGATGTTGATATCAGGAAGGATCTGTATGGAAATATTGTTCTTAGTGGTGGATCAACCATGTTCCCAGGCATTGCTGACAGAATGAGCAAAGAAATAACTGCATTAGCCCCTAGCAGCATGAAAATTAAGGTGGTAGCTCCACCTGAAAGAAAGTACAGTGTCTGGATCGGTGGCTCCATTTTGGCATCCCTCAGCACATTTCAGCAGATGTGGATTGCGAAGGCCGAGTATGATGAGTCTGGTCCATCCATTGTGCACAGGAAATGCTTCTGA | 1134 | 46.74 | MAEGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDVKEKLAYIALDFEQELETSKTGSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF | 377 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 2796238 | 2799448 | + | Tan0021601.1 | Tan05g0383 | 751691 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan05g0383 | 377 | SUPERFAMILY | Actin-like ATPase domain | 149 | 377 | IPR043129 | - | |
Tan05g0383 | 377 | FunFam | Actin, muscle | 182 | 273 | - | - | |
Tan05g0383 | 377 | CDD | NBD_sugar-kinase_HSP70_actin | 10 | 183 | - | - | |
Tan05g0383 | 377 | PRINTS | Actin signature | 51 | 62 | IPR004000 | - | |
Tan05g0383 | 377 | PRINTS | Actin signature | 238 | 254 | IPR004000 | - | |
Tan05g0383 | 377 | PRINTS | Actin signature | 63 | 85 | IPR004000 | - | |
Tan05g0383 | 377 | PRINTS | Actin signature | 142 | 161 | IPR004000 | - | |
Tan05g0383 | 377 | PRINTS | Actin signature | 28 | 37 | IPR004000 | - | |
Tan05g0383 | 377 | PRINTS | Actin signature | 117 | 130 | IPR004000 | - | |
Tan05g0383 | 377 | FunFam | Putative actin-related protein 5 | 341 | 369 | - | - | |
Tan05g0383 | 377 | ProSitePatterns | Actins and actin-related proteins signature. | 106 | 118 | IPR020902 | - | |
Tan05g0383 | 377 | Gene3D | - | 140 | 340 | - | - | |
Tan05g0383 | 377 | Gene3D | - | 10 | 371 | - | - | |
Tan05g0383 | 377 | PANTHER | ACTIN | 8 | 369 | IPR004000 | GO:0005737(PANTHER) | |
Tan05g0383 | 377 | Pfam | Actin | 5 | 377 | IPR004000 | - | |
Tan05g0383 | 377 | SUPERFAMILY | Actin-like ATPase domain | 6 | 155 | IPR043129 | - | |
Tan05g0383 | 377 | SMART | actin_3 | 7 | 377 | IPR004000 | - | |
Tan05g0383 | 377 | FunFam | Major actin | 259 | 340 | - | - | |
Tan05g0383 | 377 | Gene3D | Actin; Chain A, domain 4 | 182 | 273 | - | - | |
Tan05g0383 | 377 | ProSitePatterns | Actins signature 1. | 55 | 65 | IPR004001 | - | |
Tan05g0383 | 377 | FunFam | Actin, alpha skeletal muscle | 3 | 177 | - | - | |
Tan05g0383 | 377 | ProSitePatterns | Actins signature 2. | 358 | 366 | IPR004001 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan05g0383 | Tan-Chr5:2796238 | Tan08g1503 | Tan-Chr8:62355528 | 1.70E-215 | dispersed | |
Tan05g0383 | Tan-Chr5:2796238 | Tan05g0384 | Tan-Chr5:2796238 | 2.70E-205 | tandem | |
Tan02g1292 | Tan-Chr2:36053290 | Tan05g0383 | Tan-Chr5:2796238 | 2.50E-211 | transposed | |
Tan04g0128 | Tan-Chr4:818357 | Tan05g0383 | Tan-Chr5:2796238 | 2.30E-59 | transposed | |
Tan06g0586 | Tan-Chr6:4503859 | Tan05g0383 | Tan-Chr5:2796238 | 3.10E-52 | transposed | |
Tan09g1930 | Tan-Chr9:70295085 | Tan05g0383 | Tan-Chr5:2796238 | 1.70E-73 | transposed | |
Tan03g0957 | Tan-Chr3:66011105 | Tan05g0383 | Tan-Chr5:2796238 | 5.20E-217 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan05g0383 | K10355 | - | csv:101214246 | 749.199 |